Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060803.seq
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 149 6e-35
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 144 1e-33
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 126 3e-28
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 122 6e-27
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 115 1e-24
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 3e-23
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 83 7e-15
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 7e-14
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 75 1e-12
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 75 2e-12
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 74 3e-12
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 73 8e-12
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 68 2e-10
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 65 2e-09
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 64 2e-09
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 63 6e-09
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 63 6e-09
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 61 2e-08
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 60 6e-08
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 59 8e-08
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 59 1e-07
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 58 1e-07
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 58 2e-07
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 57 4e-07
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 56 1e-06
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 54 4e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 54 4e-06
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 52 1e-05
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 51 2e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 50 6e-05
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 49 1e-04
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 47 3e-04
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 47 5e-04
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 47 5e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 46 6e-04
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 45 0.002
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 44 0.003
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 43 0.006
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.007
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.007
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.013
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 42 0.013
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 41 0.022
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 39 0.091
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.12
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.16
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.21
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.21
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 38 0.28
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 38 0.28
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 38 0.28
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 37 0.37
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 37 0.48
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 36 0.64
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 1.5
UniRef50_A4HSX0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 35 2.0
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 34 3.4
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 3.4
UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1; Rh... 33 4.5
UniRef50_Q4Q560 Cluster: Putative uncharacterized protein; n=3; ... 33 4.5
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 33 6.0
UniRef50_A5FAI4 Cluster: Putative uncharacterized protein precur... 33 7.9
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 33 7.9
UniRef50_P35825 Cluster: S-layer protein precursor; n=1; Geobaci... 33 7.9
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 149 bits (361), Expect = 6e-35
Identities = 74/126 (58%), Positives = 90/126 (71%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN
Sbjct: 82 MHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQ 141
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRG 629
D K+TRVKLPSGAKKV+PSA A ++ + K + + + VRG
Sbjct: 142 DTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRG 201
Query: 630 VAMNPV 647
VAMNPV
Sbjct: 202 VAMNPV 207
Score = 145 bits (352), Expect = 7e-34
Identities = 66/83 (79%), Positives = 74/83 (89%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 212 VHFRDPYKFKTRKEPSLLPKALH 280
VHFRDPY++K RKE + P+ +H
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMH 83
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +2
Query: 509 SNRGMVGIVAGGGRIDKPILXAGRAYH 589
+NR MVGIVAGGGRIDKPIL AGRAYH
Sbjct: 161 ANRAMVGIVAGGGRIDKPILKAGRAYH 187
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 144 bits (350), Expect = 1e-33
Identities = 73/126 (57%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNP 141
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRG 629
+ K+TRVKLPSG+KKV+ SA A ++ + K + + + VRG
Sbjct: 142 ETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRG 201
Query: 630 VAMNPV 647
VAMNPV
Sbjct: 202 VAMNPV 207
Score = 130 bits (315), Expect = 2e-29
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 212 VHFRDPYKFKTRKEPSLLPKALH 280
V FRDPY+FK R E + + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 126 bits (305), Expect = 3e-28
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 212 VHFRDPYKFKTRKEPSLLPKALH 280
V FRDPYK+K R E + + ++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMY 83
Score = 85.8 bits (203), Expect = 8e-16
Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
+YTGQF+YCGKKA L++ RG+LARASGN+ATVI HNP
Sbjct: 82 MYTGQFIYCGKKANLQI------------------------RGKLARASGNYATVISHNP 117
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRG 629
D K++RVKLPSG+KKV+PSA A ++ + K + + + VRG
Sbjct: 118 DTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGRAYHKYKAKRNCWPKVRG 177
Query: 630 VAMNPV 647
VAMNPV
Sbjct: 178 VAMNPV 183
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 122 bits (295), Expect = 6e-27
Identities = 50/78 (64%), Positives = 65/78 (83%)
Frame = +3
Query: 261 CSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 440
C+ LY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI
Sbjct: 69 CAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVI 128
Query: 441 GHNPDAKRTRVKLPSGAK 494
HN D + TR++LPSGAK
Sbjct: 129 SHNADNETTRIRLPSGAK 146
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 155 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKEPSLLPKALH 280
+G+VK I HDPGRGAPLA V FR+P ++ KE + + L+
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLY 74
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 115 bits (276), Expect = 1e-24
Identities = 54/74 (72%), Positives = 61/74 (82%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 212 VHFRDPYKFKTRKE 253
V FR P++FK +KE
Sbjct: 61 VTFRHPFRFKKQKE 74
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 291 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 398
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 3e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +2
Query: 44 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 223
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 224 DPYKFKTRK 250
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 82.6 bits (195), Expect = 7e-15
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +3
Query: 258 HCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 437
+ + LY GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A V
Sbjct: 69 YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVV 128
Query: 438 IGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LL 614
IG P+ +T ++LPSG + S A ++ + F K + + + +
Sbjct: 129 IGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRARAKAWKY 188
Query: 615 AYVRGVAMNP 644
VRG AM+P
Sbjct: 189 PTVRGKAMSP 198
Score = 38.7 bits (86), Expect = 0.12
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 32 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 208
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 209 VV 214
+
Sbjct: 57 KI 58
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 169
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +3
Query: 270 RLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 449
+LY + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H+
Sbjct: 107 KLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHS 166
Query: 450 PDAKRTRVKLPSGAKKVLPSATEA 521
T++KLPS K+L S A
Sbjct: 167 KYNNVTKLKLPSKKIKILSSFCRA 190
Score = 46.4 bits (105), Expect = 6e-04
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 7/197 (3%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 212 VHFRDPYKFKTRKEPSLLPKALH-RPICLLWKESNS*SWKCDACWSYA*G-YHC-VQS*R 382
+ F FK E + + L+ ++ + ++ G + C V+
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 383 ENG**--RSSGTCLWKLRHCDWTQS*C*AYKSKATVWSQEGSAISN--RGMVGIVAGGGR 550
+G RS+G + L H + +K + S++ +S+ R +G+VAGGG+
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNV------TKLKLPSKKIKILSSFCRATIGVVAGGGK 200
Query: 551 IDKPILXAGRAYHSTRS 601
+KP+L AG+ Y+ +S
Sbjct: 201 YEKPLLKAGKNYYKFKS 217
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/83 (42%), Positives = 51/83 (61%)
Frame = +3
Query: 255 LHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFAT 434
L S + G + CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +AT
Sbjct: 69 LLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYAT 128
Query: 435 VIGHNPDAKRTRVKLPSGAKKVL 503
V+ H +A RT V +PSG K L
Sbjct: 129 VVTH--EATRTAVSMPSGNIKWL 149
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 515 RGMVGIVAGGGRIDKPILXAGRAYHSTRS 601
R +VGIVAG GR+D+P L AG+ YH ++
Sbjct: 154 RAVVGIVAGSGRVDRPWLKAGKKYHKMKT 182
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
+Y GQ + G A E GN++P+G +PEGT V N+E + GD G+LAR +G++A V+G
Sbjct: 74 MYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR-- 131
Query: 453 DAKRTRVKLPSGAKKVLPSATEA 521
+T ++LPSG K +P+ + A
Sbjct: 132 AGAKTILRLPSGKDKEVPNDSRA 154
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 512 NRGMVGIVAGGGRIDKPILXAGRAYH 589
+R +GI AG GRI+KPI+ AG AYH
Sbjct: 152 SRATIGIPAGAGRIEKPIMKAGFAYH 177
Score = 35.9 bits (79), Expect = 0.84
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 32 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 208
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 209 VVHFRDPYKF 238
V D +F
Sbjct: 57 RVVREDGVEF 66
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 264 SRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 443
S +YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+
Sbjct: 65 SEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVN 124
Query: 444 HNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLE-GHTTVQGQT*LLAY 620
H + T +K+PSG K + S ++ + K H + + +
Sbjct: 125 HRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPR 184
Query: 621 VRGVAMNPV 647
VRGVAMNPV
Sbjct: 185 VRGVAMNPV 193
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 67.7 bits (158), Expect = 2e-10
Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Frame = +3
Query: 282 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 461
G + CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G +AT+I H D
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVG 138
Query: 462 RTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRGVAM 638
RT V+LPSG + A ++ F K + + ++ + VRGVAM
Sbjct: 139 RTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAM 198
Query: 639 NPV 647
N V
Sbjct: 199 NAV 201
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 32 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 208
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 209 VVHFRD 226
V F D
Sbjct: 61 RVRFED 66
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 64.9 bits (151), Expect = 2e-09
Identities = 43/127 (33%), Positives = 69/127 (54%)
Frame = +3
Query: 267 RRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 446
+RL G V G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G
Sbjct: 108 QRLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR 167
Query: 447 NPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVR 626
D ++L SG ++++ A A SV + N+ G + +G+ +VR
Sbjct: 168 --DQGMAILRLNSGEQRLVSGACFA-SVGAVSNPDHGNINDGKAGRSVWRGKR---PHVR 221
Query: 627 GVAMNPV 647
GVAMNPV
Sbjct: 222 GVAMNPV 228
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 64.5 bits (150), Expect = 2e-09
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
L GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G
Sbjct: 73 LVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTG 132
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRG 629
D + VKL S + S A ++ V K + + + +VRG
Sbjct: 133 D--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNNYWKYKVKAKKWPHVRG 190
Query: 630 VAMNPV 647
VAMN V
Sbjct: 191 VAMNAV 196
Score = 42.3 bits (95), Expect = 0.010
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 208
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 209 VVHFRDPYKF 238
++ D KF
Sbjct: 56 LIKLDDGTKF 65
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 62.9 bits (146), Expect = 6e-09
Identities = 32/83 (38%), Positives = 52/83 (62%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
+YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++G +
Sbjct: 78 MYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSG 137
Query: 453 DAKRTRVKLPSGAKKVLPSATEA 521
++ ++LPSG K + + A
Sbjct: 138 NS--AIIQLPSGKVKQVNAKARA 158
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 515 RGMVGIVAGGGRIDKPILXAGRAYHSTRS 601
R +GI AG GR +KP+L AG AY+ ++
Sbjct: 157 RATIGIAAGAGRDEKPLLKAGNAYYKWKA 185
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 62.9 bits (146), Expect = 6e-09
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +3
Query: 282 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 461
G+ + G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG- 137
Query: 462 RTRVKLPSG 488
VKLPSG
Sbjct: 138 -VTVKLPSG 145
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 205
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 206 AVVHFRD 226
A V F D
Sbjct: 58 AKVRFED 64
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +3
Query: 282 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 461
G VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+FA ++ D
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD-- 135
Query: 462 RTRVKLPSGAKKVLPSATEA 521
+ V+LPSG K L + A
Sbjct: 136 KVIVQLPSGQFKTLSANARA 155
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 515 RGMVGIVAGGGRIDKPILXAGRAYH 589
R ++G++AGGGR +KP + AG Y+
Sbjct: 154 RAVIGVIAGGGRKEKPFVKAGNKYY 178
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 59.7 bits (138), Expect = 6e-08
Identities = 39/109 (35%), Positives = 57/109 (52%)
Frame = +3
Query: 321 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
+ S A ++ ++ F K G + G+ VRGVAMNPV
Sbjct: 419 IDSRCRATIGIVSNLNHGKRKFNK-AGQSRWLGRR---PIVRGVAMNPV 463
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 59.3 bits (137), Expect = 8e-08
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Frame = +3
Query: 219 SAIHTSSRQGRS-LHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGD 395
S I S Q S + S +L G FV G + GN +P+ ++P GT+V N+E G
Sbjct: 185 SPIKEQSVQSMSYILASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGS 244
Query: 396 RGRLARASGNFATVI-GHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXK 572
G++ RA+G A +I HN K ++LPSG K P A ++ ++ N K
Sbjct: 245 GGQVVRAAGTSAQLIKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHF-NTDLK 300
Query: 573 LEGHTTVQGQT*LLAYVRGVAMNPV 647
G + G+ VRGVAMNP+
Sbjct: 301 KAGASRWLGRR---PTVRGVAMNPI 322
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 58.8 bits (136), Expect = 1e-07
Identities = 44/145 (30%), Positives = 67/145 (46%)
Frame = +3
Query: 213 YTSAIHTSSRQGRSLHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 392
Y IH + R + R G + G + +++GN +P+ MP GT + N+E +G
Sbjct: 88 YICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLG 147
Query: 393 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXK 572
G+LARA+G A +I + K +KLPSG +++ A + V V +
Sbjct: 148 RGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGR 205
Query: 573 LEGHTTVQGQT*LLAYVRGVAMNPV 647
G G+ VRGV MNPV
Sbjct: 206 -AGSKCWLGKR---PVVRGVVMNPV 226
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +3
Query: 276 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD 455
Y GQ + G T+ G + +P+G+ V N+E GD G R++G FA V+ H
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH--- 127
Query: 456 AKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAY-VRGV 632
R +KLPSG+ + A ++ ++ K H Y VRGV
Sbjct: 128 GSRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRSKAKRPYTVRGV 187
Query: 633 AMNPV 647
AMN V
Sbjct: 188 AMNAV 192
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 205
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 57.6 bits (133), Expect = 2e-07
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 264 SRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 443
++ + G + + A ++VGN P+ +PEGT++ N+E K G G++AR++G ++G
Sbjct: 108 AKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILG 167
Query: 444 HNPDAKRTRVKLPSG-AKKVL 503
+ D K ++L SG +KVL
Sbjct: 168 KDDDGKYVTLRLTSGEVRKVL 188
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 56.8 bits (131), Expect = 4e-07
Identities = 41/110 (37%), Positives = 59/110 (53%)
Frame = +3
Query: 318 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 497
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 498 VLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
+ S A ++ T K GH+ G+ VRGVAMNPV
Sbjct: 353 AVDSRCHATIGIVSNPSHGTRKLRK-AGHSRWLGRR---PVVRGVAMNPV 398
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 55.6 bits (128), Expect = 1e-06
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
L G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A ++G
Sbjct: 110 LEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--K 167
Query: 453 DAKRTRVKLPSG-AKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRG 629
+ K V+L SG + VL ++ + E L N G T QG+ VRG
Sbjct: 168 EGKYAIVRLSSGEVRLVLLTSRATIGTVGNEQHELIN--SGKAGRTRWQGKR---PTVRG 222
Query: 630 VAMNP 644
MNP
Sbjct: 223 SVMNP 227
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +3
Query: 282 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 461
G + G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG- 136
Query: 462 RTRVKLPSG 488
+KLPSG
Sbjct: 137 -VVLKLPSG 144
Score = 35.9 bits (79), Expect = 0.84
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 208
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 209 VVHFRD 226
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 53.6 bits (123), Expect = 4e-06
Identities = 37/111 (33%), Positives = 57/111 (51%)
Frame = +3
Query: 315 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 494
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 495 KVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
+++ E + V + + KL G + RG AMNPV
Sbjct: 209 RMI---HERCMATVGRVGLAEHELVKL-GKAGRARWLGWRPHTRGTAMNPV 255
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 52.0 bits (119), Expect = 1e-05
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 321 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLA---YVRGVAMNPV 647
+ S A V +++NL + GQ+ L VRGVAMNPV
Sbjct: 381 IDSRCRA------TVGIVSNLHHG-KRKLDKAGQSRWLGRRPIVRGVAMNPV 425
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/109 (29%), Positives = 58/109 (53%)
Frame = +3
Query: 315 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 494
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 495 KVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMN 641
+ + A ++ + + K G + +G+ VRGVAMN
Sbjct: 272 RYVHMNCHATLGVVSNKEHQAISWGK-AGRSRHRGKR---PMVRGVAMN 316
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 49.6 bits (113), Expect = 6e-05
Identities = 37/110 (33%), Positives = 57/110 (51%)
Frame = +3
Query: 318 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 497
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 498 VLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
++ S A ++ + K G + G+ VRGVAMNPV
Sbjct: 417 LIDSRCRATIGIVSNPNHGARKLRK-AGQSRWSGRR---PIVRGVAMNPV 462
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 503
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/74 (31%), Positives = 44/74 (59%)
Frame = +3
Query: 282 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 461
G + G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++ D
Sbjct: 139 GDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGG 198
Query: 462 RTRVKLPSGAKKVL 503
V+LPSG ++++
Sbjct: 199 YCVVRLPSGEQRLV 212
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 46.8 bits (106), Expect = 5e-04
Identities = 35/108 (32%), Positives = 52/108 (48%)
Frame = +3
Query: 321 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNP 644
+ + A + T K G + G + VRGVAMNP
Sbjct: 73 INAKCRATIGTVSNPSHGTKKLYK-AGQSRWLG---IRPKVRGVAMNP 116
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/110 (29%), Positives = 53/110 (48%)
Frame = +3
Query: 312 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 491
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 492 KKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMN 641
+ + A ++ +D K G + G + VRGVAMN
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGK-AGRSRWLG---IRPTVRGVAMN 339
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 46.4 bits (105), Expect = 6e-04
Identities = 35/109 (32%), Positives = 53/109 (48%)
Frame = +3
Query: 321 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
+ S A ++ + F K G + G+ VRGVAMNPV
Sbjct: 180 INSQCRATIGIVSNENHGKRNFRK-AGQSRWLGRR---PVVRGVAMNPV 224
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 44.8 bits (101), Expect = 0.002
Identities = 31/100 (31%), Positives = 50/100 (50%)
Frame = +3
Query: 348 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSATEAWS 527
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG K + T +
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSG-KIIKHPITSLAT 193
Query: 528 VLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
+ + + L N+ G G+ VRGVAMNPV
Sbjct: 194 IGSISNEQLRNIVIGKAGRNRNLGRR---PIVRGVAMNPV 230
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEG 359
+YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 48 IYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/110 (29%), Positives = 55/110 (50%)
Frame = +3
Query: 315 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 494
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGET 189
Query: 495 KVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNP 644
+ A ++ +D + K G +G + VRG AMNP
Sbjct: 190 RKFLKECRATVGVVSNLDHNLVVIGK-AGRNRHRG---IRPTVRGSAMNP 235
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 43.2 bits (97), Expect = 0.006
Identities = 34/128 (26%), Positives = 63/128 (49%)
Frame = +3
Query: 264 SRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 443
++ L G + G KA L++GN +P+ + G+ + N+E + +G L + + N +I
Sbjct: 98 TKNLKIGSQINFGFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIIL 156
Query: 444 HNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYV 623
D T VKLPSG K+L + +L ++++ + ++ H + + +
Sbjct: 157 MIGDIYVT-VKLPSGEIKLL---LKNLFCILGQLEIRRKVNKNIKKHAGFNRKLSIRPKI 212
Query: 624 RGVAMNPV 647
RG AMN V
Sbjct: 213 RGAAMNAV 220
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRK 103
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 461
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -1
Query: 401 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSG 264
T++TH + +AHNGTL S R +I+N + L+TI++L V G
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALG 52
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.9 bits (94), Expect = 0.013
Identities = 34/100 (34%), Positives = 48/100 (48%)
Frame = +3
Query: 348 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSATEAWS 527
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ A
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 528 VLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
+ V V + G G+ VRGV MNPV
Sbjct: 61 GQVGNVGVNQKSLGR-AGSKCWLGKR---PVVRGVVMNPV 96
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 41.9 bits (94), Expect = 0.013
Identities = 41/145 (28%), Positives = 55/145 (37%)
Frame = +3
Query: 213 YTSAIHTSSRQGRSLHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 392
Y S +H + + G + G A VGN P MP GT++ +E G
Sbjct: 90 YISPVHHGDGDKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPG 149
Query: 393 DRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXK 572
G+ ARA+G A + + +R LP G + +P A VD K
Sbjct: 150 KGGQSARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPAVVGQAGNVDSKNRASGK 207
Query: 573 LEGHTTVQGQT*LLAYVRGVAMNPV 647
G G VRGV MNPV
Sbjct: 208 -AGSKRWPGSR---PRVRGVVMNPV 228
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 41.1 bits (92), Expect = 0.022
Identities = 34/125 (27%), Positives = 55/125 (44%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
L G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 116 LSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVAKEG 175
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGV 632
+ R++ +KVL + L +L G + VRGV
Sbjct: 176 EYATLRMR-SGEMRKVLADCKATIGEVSNNEHNLVSL-----GKAGASRWRGVRPTVRGV 229
Query: 633 AMNPV 647
AMNPV
Sbjct: 230 AMNPV 234
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 39.1 bits (87), Expect = 0.091
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 315 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 494
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 495 KVL 503
+ +
Sbjct: 280 RYI 282
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.12
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Frame = +3
Query: 243 QGRSLHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASG 422
Q + L ++ G +Y G+ L++GN++P+ +P G+ + N+E + S
Sbjct: 96 QYKYLPITKNTKEGDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSK 155
Query: 423 NFATVIGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLE--GHTTVQ 596
A +I K +KLPSG ++L + +L E++++ LF K G +
Sbjct: 156 ISAFLI--YIGKKYVTIKLPSGEIRLL---NKNVFCILGELNIIP-LFLKKNKAGFNRLL 209
Query: 597 GQT*LLAYVRGVAMN 641
G+ VRGVAMN
Sbjct: 210 GKR---PKVRGVAMN 221
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.12
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 503
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 38.3 bits (85), Expect = 0.16
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 521 CLCC*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSS 342
C W NLL R L IR+V++ + ++ + TSIT+ +F + GT +
Sbjct: 70 CSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGSRA 129
Query: 341 NRHHISNFKSCFLSTINKLACV 276
++ + FL+ N+LA V
Sbjct: 130 QGQNVIGNEGGFLTAANELARV 151
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 440
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 303 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 446
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 37.5 bits (83), Expect = 0.28
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 485
G+ P+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 37.5 bits (83), Expect = 0.28
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +3
Query: 303 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 482
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 483 SGAKKVLPSATEAWSVLLLEVDVLTNLFXKLE--GHTTVQGQT*LLAYVRGVAMNPV 647
S +++ + E ++ + ++N+ K++ + + + VRG+AMNPV
Sbjct: 161 SKECRLI--SNECYAT----IGTVSNIEKKIKKSKKASESRKKGIRPIVRGLAMNPV 211
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 37.5 bits (83), Expect = 0.28
Identities = 35/125 (28%), Positives = 57/125 (45%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
L G ++ + L+ GN + +P G + ++E + RA+G++AT+I +
Sbjct: 91 LLVGDCIFAKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SK 148
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGV 632
K +KL SG + + S A + + F K G ++G L VRGV
Sbjct: 149 FEKIVILKLKSGELRRVHSNCMATIGSISNFQYIYRNFRKA-GFYRLKGW---LPVVRGV 204
Query: 633 AMNPV 647
AMNPV
Sbjct: 205 AMNPV 209
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 401 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACV 276
T +TH + +AHNGTL S R +I+N + L+ +++L V
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGV 60
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 36.7 bits (81), Expect = 0.48
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGH 584
L A L D+ +F + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 36.3 bits (80), Expect = 0.64
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 59 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 235
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
Score = 33.1 bits (72), Expect = 6.0
Identities = 35/114 (30%), Positives = 53/114 (46%)
Frame = +3
Query: 306 KATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 485
K +L GN + + GT++ +E G +R+SG+ + +I D K +KLPS
Sbjct: 96 KISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSRSSGSESEIIFK--DNKFGVIKLPS 153
Query: 486 GAKKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
G KK + A + +V L+ G +G + VRGVAMNPV
Sbjct: 154 GIKKKISLNCMATIGKICTFNVKKKLYKA--GQNRWRG---IRPTVRGVAMNPV 202
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 485
G+ P+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A4HSX0 Cluster: Putative uncharacterized protein; n=1;
Leishmania infantum|Rep: Putative uncharacterized
protein - Leishmania infantum
Length = 3340
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/88 (26%), Positives = 39/88 (44%)
Frame = -2
Query: 580 PSSXQNRFVNTSTSSNNTDHASVADGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 401
P S F +T+TS+N T + + + +A S T++ LAS + + A A++
Sbjct: 415 PRSPSLSFADTNTSANTTASSPSSHTESTMAFGTSTTVMALASATGTAAMPRLNNAAAKK 474
Query: 400 PLSPIFSSRLHTMVPSGIAPTGITFPTS 317
L + H MVP +A P +
Sbjct: 475 SLMSSAVASPHLMVPQRLASLASRLPAT 502
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 34.7 bits (76), Expect = 2.0
Identities = 29/109 (26%), Positives = 49/109 (44%)
Frame = +3
Query: 321 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
+G+ + + P+ +I NL + A+++G F ++I + +KLP+G KK
Sbjct: 132 LGSFIILNLAPKHSIFSNLISFNKKKSNYAKSAGTFLSIIKKIKEINLFILKLPTGEKKY 191
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQGQT*LLAYVRGVAMNPV 647
++A L N F + G + + VRGVAMNPV
Sbjct: 192 FSGDSKA---TLGRNSNFLNKF-TVTGKAGINRNKGWRSSVRGVAMNPV 236
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 440
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 168
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 440
G+ P+GA+P GT+V NLE + G RA+G ++
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL 202
>UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Glycosyl
transferase, family 2 - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 345 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSATEA 521
A+PE T +CNL E D+G +A A+G V G N + + R +L +G + LP T++
Sbjct: 88 AVPEPTWLCNLSEAFKDQG-VAAATG---FVRGRNGISFQWRGRLVNGQSQTLPITTKS 142
>UniRef50_Q4Q560 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1034
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 404 TTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSGAMK 255
TTS+ +L + A G R S+R IS + C S+ + L C +P GA++
Sbjct: 641 TTSVMKYLLRTAL-GIFRGLSDRRGISLSQECPFSSYSTLQCAKPCGALR 689
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 369 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 503
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 440
G+ P+GA+P GT++ N+E + G + RA+G ++
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL 217
>UniRef50_A5FAI4 Cluster: Putative uncharacterized protein
precursor; n=2; Flavobacteriales|Rep: Putative
uncharacterized protein precursor - Flavobacterium
johnsoniae UW101
Length = 425
Score = 32.7 bits (71), Expect = 7.9
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 529 YCCWRWTY*QTYFXSWKGIPQYKVKRN 609
Y W W Y TY+ +W+ P Y+ + N
Sbjct: 160 YSTWYWGYYPTYYTAWRPYPVYRYRNN 186
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 32.7 bits (71), Expect = 7.9
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +3
Query: 306 KATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 485
++ L+ G+ + + G+++ NL G G++ RA G F ++ + R+K S
Sbjct: 104 RSGLQNGHSKTLQNILTGSLIYNLSLSPGKDGKILRAPGAFGRILKRTKTLAKIRLK--S 161
Query: 486 GAKKVLPSATEAWSVLLLEVDVLTNLFXKLE--GHTTVQGQT*LLAYVRGVAMNPV 647
G + T A + ++ D + F KL+ G + G+ VRGVAMNP+
Sbjct: 162 GQYRWFDIKTIATNGVVSNPD---SRFTKLQKAGQSRWLGRR---PTVRGVAMNPI 211
>UniRef50_P35825 Cluster: S-layer protein precursor; n=1;
Geobacillus stearothermophilus|Rep: S-layer protein
precursor - Bacillus stearothermophilus (Geobacillus
stearothermophilus)
Length = 1228
Score = 32.7 bits (71), Expect = 7.9
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 315 LEVGNVMPVGAMPEG-TIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 491
+E G +PV A G TI L+E + + A N T+ G+N +A + A
Sbjct: 427 VETGKRIPVIASTSGSTITITLKEALVTGKQYKLAINNVKTLTGYNAEAYELVFTANASA 486
Query: 492 KKVLPSATEAWSVLLLEVDVLTNLFXKLEGHTTVQG 599
V + T L + TN++ KL G G
Sbjct: 487 PTVATAPTTLGGTTLSTGSLTTNVWGKLAGGVNEAG 522
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,384,730
Number of Sequences: 1657284
Number of extensions: 15398300
Number of successful extensions: 45304
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 43387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45268
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -