Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060803.seq
(647 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 153 6e-39
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 30 0.073
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 26 0.89
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 25 2.1
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 2.7
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 2.7
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 24 4.8
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 6.3
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 8.3
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 153 bits (370), Expect = 6e-39
Identities = 75/126 (59%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+VI HNP
Sbjct: 82 MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNP 141
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRG 629
D KRTRVKLPSGAKKVLPSA A ++ + K + + + VRG
Sbjct: 142 DTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRG 201
Query: 630 VAMNPV 647
VAMNPV
Sbjct: 202 VAMNPV 207
Score = 134 bits (324), Expect = 2e-33
Identities = 61/74 (82%), Positives = 67/74 (90%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60
Query: 212 VHFRDPYKFKTRKE 253
V+FRDPY+F+ K+
Sbjct: 61 VNFRDPYRFRLSKQ 74
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 29.9 bits (64), Expect = 0.073
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +2
Query: 473 KATVWSQEGSAISNRGMVGIVAGGGRIDKPILXAGRAYHSTRSNVTAGICTWCC 634
K +W +A + + +G V GG D IL GRAYH + C+ C
Sbjct: 73 KQLIWD---TASAGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNC 123
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 26.2 bits (55), Expect = 0.89
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +1
Query: 508 QQQRHGRYCCWRWTY 552
QQQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 25.0 bits (52), Expect = 2.1
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Frame = -1
Query: 428 EVSRGTCQTTSI--THFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSG 264
+V R +TT I THF FK H R + CF + CV SG
Sbjct: 172 DVLRTRVKTTGIVETHFSFKSIHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSG 228
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 2.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 RHGYIKGVVKDIIHDP 187
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 2.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 RHGYIKGVVKDIIHDP 187
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.8 bits (49), Expect = 4.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 410 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 282
C+T SIT + LRH +S ++S +L ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.4 bits (48), Expect = 6.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 579 LPAXKIGLSIRPPPATIPTM 520
LP +G+ RPPP +PTM
Sbjct: 109 LPPPMMGM--RPPPMMVPTM 126
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.0 bits (47), Expect = 8.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 432 TVIGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLEV 545
+V G NPDAKR L S K++ L +++
Sbjct: 16 SVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKI 53
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,774
Number of Sequences: 2352
Number of extensions: 16607
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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