Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060803.seq
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 133 1e-31
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 37 0.014
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 5.0
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 5.0
U58746-4|AAB00624.1| 751|Caenorhabditis elegans Phospholipase c... 28 5.0
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 28 5.0
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 28 5.0
Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 28 6.6
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 28 6.6
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 28 6.6
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 27 8.7
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 27 8.7
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 133 bits (321), Expect = 1e-31
Identities = 63/126 (50%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
Frame = +3
Query: 273 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNP 452
++TGQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNP
Sbjct: 82 MHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNP 141
Query: 453 DAKRTRVKLPSGAKKVLPSATEAWSVLLLEVDVLTNLFXKL-EGHTTVQGQT*LLAYVRG 629
D K+TR++LPSGAKKV+ S A L+ K + + + VRG
Sbjct: 142 DTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRG 201
Query: 630 VAMNPV 647
VAMNPV
Sbjct: 202 VAMNPV 207
Score = 131 bits (316), Expect = 5e-31
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 211
MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1 MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60
Query: 212 VHFRDPYKFKTRKEPSLLPKALH 280
+ FRDPYK+KT K + + +H
Sbjct: 61 IAFRDPYKYKTVKTTVVAAEGMH 83
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 324 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 500
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 501 LPSATEAWSVLLLEVDVLTNLFXKLEGH 584
L A L D+ +F + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 438 IGHNPDAKRTRVKLPSGAKKVLPSATEAWSVLLLE 542
IGH D +RTR LP+G KKVL + +LL++
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVLVQNVKDLDMLLMQ 90
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 32 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 142
+GR R+ +KG F +HT K L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 143 HGYIKGVVKDIIHDPGRGAPLAVVHFR 223
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 143 HGYIKGVVKDIIHDPGRGAPLAVVHFR 223
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>U58746-4|AAB00624.1| 751|Caenorhabditis elegans Phospholipase c
protein 4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 562 RFVNTSTSSNNTDHASVADGRTFLAPDGSFTLVRL 458
RFV T SS+N + +VAD + FL + F V L
Sbjct: 233 RFVMTQASSDNVETLTVADLQRFLTEEQGFENVDL 267
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = -1
Query: 506 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHI 327
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH- 263
Query: 326 SNFKSCFLSTINKLACVEPSGAMKA 252
S + + S N + C E K+
Sbjct: 264 SKW-AVSNSQTNPIVCFEDMNRQKS 287
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 595 CTVVCPSSXQNRFVNTSTSSNNTDHASVADGRTFLAPD 482
C V+CP FV+T SN +H + + F AP+
Sbjct: 402 CDVLCPMETYQEFVSTRIISNKEEHDVIC--QNFEAPE 437
>Z99281-24|CAE18027.1| 155|Caenorhabditis elegans Hypothetical
protein Y57G11C.44 protein.
Length = 155
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 80 VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 205
+S ++RK + LD+++ G K ++KDI +D + P+
Sbjct: 1 MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPV 42
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 892 YRMEPPHLCPQEVYHLMCSCWR 913
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 839 YRMEPPHLCPQEVYHLMCSCWR 860
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 891 YRMEPPHLCPQEVYHLMCSCWR 912
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 891 YRMEPPHLCPQEVYHLMCSCWR 912
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 478 YRLEPRRFCHQQQRHGRYCCWR 543
YR+EP C Q+ H CWR
Sbjct: 838 YRMEPPHLCPQEVYHLMCSCWR 859
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 576 PAXKIGLSIRPPPATIPTMPLLLMAEPSWLQTVALLLYA*HQD 448
P + + P + LLL EP +Q VALLLY QD
Sbjct: 1091 PMPSVKKQLTEPVLLYQLVQLLLTYEPQIVQRVALLLYLVMQD 1133
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 576 PAXKIGLSIRPPPATIPTMPLLLMAEPSWLQTVALLLYA*HQD 448
P + + P + LLL EP +Q VALLLY QD
Sbjct: 1091 PMPSVKKQLTEPVLLYQLVQLLLTYEPQIVQRVALLLYLVMQD 1133
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -3
Query: 576 PAXKIGLSIRPPPATIPTMPLLLMAEPSWLQTVALLLYA*HQD 448
P + + P + LLL EP +Q VALLLY QD
Sbjct: 1091 PMPSVKKQLTEPVLLYQLVQLLLTYEPQIVQRVALLLYLVMQD 1133
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 549 RPPPATIPTMPLLLMAEPSWLQTVAL 472
RPP T+P+ L L+ EP+ +T+ +
Sbjct: 242 RPPTTTVPSTTLELITEPTSTETIPI 267
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 546 PPPATIPTMPLLLMAEPS 493
PPP+T PT+P L PS
Sbjct: 93 PPPSTFPTLPPLTFGTPS 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,073,631
Number of Sequences: 27780
Number of extensions: 362694
Number of successful extensions: 1035
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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