Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060800.seq
(583 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 158 3e-39
03_01_0547 + 4093196-4093657,4094267-4095148 158 3e-39
03_01_0544 + 4082528-4082989,4083585-4084466 158 3e-39
03_01_0543 + 4076981-4077442,4078145-4079026 158 3e-39
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 103 1e-22
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 97 7e-21
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 97 7e-21
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 95 3e-20
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 95 4e-20
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 68 5e-12
02_04_0462 + 23131433-23132836 66 1e-11
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 36 0.024
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 33 0.13
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 33 0.22
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 32 0.29
03_05_0511 + 25056018-25059107 32 0.38
02_04_0148 - 20198407-20201424 31 0.51
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.51
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.67
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.67
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 31 0.67
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.89
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 30 1.2
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 1.2
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 30 1.5
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.5
01_06_0662 + 30987187-30987277,30987825-30990214 30 1.5
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 2.0
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 29 3.6
06_01_0501 - 3587390-3587528,3587922-3588031,3588122-3588187,358... 28 4.7
04_04_1324 + 32659752-32661972,32662067-32662761 28 4.7
04_01_0131 - 1433821-1434564,1435509-1435751 28 4.7
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 6.2
01_01_0016 - 88825-90411 28 6.2
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 158 bits (383), Expect = 3e-39
Identities = 77/110 (70%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTN-HHTVSPXLRHQEGSISYIKKIGY 581
REHALLAFTLGVKQ+I NKMD+T ++ + + SY+KK+GY
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183
Score = 132 bits (320), Expect = 1e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 218 DKLKAERE 241
DKLKAERE
Sbjct: 61 DKLKAERE 68
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 158 bits (383), Expect = 3e-39
Identities = 77/110 (70%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTN-HHTVSPXLRHQEGSISYIKKIGY 581
REHALLAFTLGVKQ+I NKMD+T ++ + + SY+KK+GY
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183
Score = 132 bits (320), Expect = 1e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 218 DKLKAERE 241
DKLKAERE
Sbjct: 61 DKLKAERE 68
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 158 bits (383), Expect = 3e-39
Identities = 77/110 (70%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTN-HHTVSPXLRHQEGSISYIKKIGY 581
REHALLAFTLGVKQ+I NKMD+T ++ + + SY+KK+GY
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183
Score = 132 bits (320), Expect = 1e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 218 DKLKAERE 241
DKLKAERE
Sbjct: 61 DKLKAERE 68
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 158 bits (383), Expect = 3e-39
Identities = 77/110 (70%), Positives = 90/110 (81%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQT
Sbjct: 74 DIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTN-HHTVSPXLRHQEGSISYIKKIGY 581
REHALLAFTLGVKQ+I NKMD+T ++ + + SY+KK+GY
Sbjct: 134 REHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGY 183
Score = 132 bits (320), Expect = 1e-31
Identities = 62/68 (91%), Positives = 63/68 (92%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 218 DKLKAERE 241
DKLKAERE
Sbjct: 61 DKLKAERE 68
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 103 bits (247), Expect = 1e-22
Identities = 50/104 (48%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +3
Query: 273 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 452
FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LL
Sbjct: 26 FETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLL 85
Query: 453 AFTLGVKQLIVGVNKMDSTNHHTVSPXLRHQEGS-ISYIKKIGY 581
A TLGV +L+V +NKMD + EG + ++K GY
Sbjct: 86 AKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGY 129
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 97.5 bits (232), Expect = 7e-21
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Frame = +3
Query: 258 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN---- 425
+A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKS 374
Query: 426 -GQTREHALLAFTLGVKQLIVGVNKMDSTNH 515
GQT+EHA L + GV+QLIV VNKMD+ +
Sbjct: 375 VGQTKEHAQLIRSFGVEQLIVAVNKMDAIGY 405
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +2
Query: 53 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 232
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 233 ERE 241
ERE
Sbjct: 306 ERE 308
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 97.5 bits (232), Expect = 7e-21
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 5/91 (5%)
Frame = +3
Query: 258 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN---- 425
+A+ ET KY V ++D+PGH+DF+ NMI+G +QAD A+L+V A TG FEAG+
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEGGKS 374
Query: 426 -GQTREHALLAFTLGVKQLIVGVNKMDSTNH 515
GQT+EHA L + GV+QLIV VNKMD+ +
Sbjct: 375 VGQTKEHAQLIRSFGVEQLIVAVNKMDAIGY 405
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +2
Query: 53 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 232
+ +N+ ++GHVDSGKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 233 ERE 241
ERE
Sbjct: 306 ERE 308
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 95.5 bits (227), Expect = 3e-20
Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = +3
Query: 273 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKN--GQTREHA 446
F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ A G FEAG+ N GQT+EH+
Sbjct: 307 FDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGINGIGQTKEHS 366
Query: 447 LLAFTLGVKQLIVGVNKMDSTNH 515
L + GV LIV VNKMDS +
Sbjct: 367 QLVRSFGVDNLIVVVNKMDSVEY 389
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 182 MGKGSFKYAWVLDKLKAERE 241
+GKGSF YAW +D+ ERE
Sbjct: 276 IGKGSFAYAWAMDESADERE 295
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Frame = +3
Query: 273 FETSKYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 440
FET TI+DAP GH+ ++ NMI+G SQAD VL+++A GEFE G K GQTRE
Sbjct: 67 FETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTRE 126
Query: 441 HALLAFTLGVKQLIVGVNKMD 503
H LLA TLGV +LIV +NKMD
Sbjct: 127 HVLLAKTLGVAKLIVVINKMD 147
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +2
Query: 86 DSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 238
D+GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/81 (40%), Positives = 51/81 (62%)
Frame = +3
Query: 270 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 449
++ET+K + +D PGH D++KNMITG +Q D +L+V+A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 450 LAFTLGVKQLIVGVNKMDSTN 512
LA +GV L+ +NK+D+ +
Sbjct: 177 LARQVGVPSLVCFLNKVDAVD 197
Score = 34.7 bits (76), Expect = 0.054
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 44 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 193
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>02_04_0462 + 23131433-23132836
Length = 467
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/81 (39%), Positives = 49/81 (60%)
Frame = +3
Query: 270 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 449
++ET + +D PGH D++KNMITG +Q D A+L+V+ G QT+EH L
Sbjct: 127 EYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHIL 179
Query: 450 LAFTLGVKQLIVGVNKMDSTN 512
LA +GV +++V +NK D +
Sbjct: 180 LAKQVGVPKIVVFLNKKDQVD 200
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 35 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 193
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 291 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 470
+V+ +D PGH + M+ G + D A+L++AA QT EH + +
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAANES------CPQPQTSEHLAAVEIMRL 202
Query: 471 KQLIVGVNKMD 503
+ +I+ NK+D
Sbjct: 203 QHIIILQNKID 213
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 228 RLSVSXYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
R+S+ + L Y I+D PGH +F M AD AVL+V A G
Sbjct: 199 RVSIKAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 473
+T +D PGH F G + D VL+VAA G + + HA A
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTL----EAMSHAKAANV---- 298
Query: 474 QLIVGVNKMDST 509
++V VNK D +
Sbjct: 299 PIVVAVNKCDKS 310
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 288 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 449
Y V IID PGH DF + D A+L++ + G I+ + Q R + +
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIYKCGGI 139
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.38
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIYKCG 133
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
V +ID+PGH DF + + +D A+++V A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
V +ID+PGH DF + AD A+++V A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 184
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.51
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIYKCG 133
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ ++D PGH DF + + AVL+V AG G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 11 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 133
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 282 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 383
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 11 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 133
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 282 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 383
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +3
Query: 237 VSXYHN--DIALWKFETSK----YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 383
+S Y+ D AL FE + Y + +ID+PGH DF + D A+++V
Sbjct: 75 ISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 133
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 56 HINIVVIGHVDSGKSTTTGHLIYKCG 133
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 276 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 455
+ Y + +ID PGH DF + + A+L+V A G QT + LA
Sbjct: 130 DAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG-------VQAQTIANFYLA 182
Query: 456 FTLGVKQLIVGVNKMD 503
F + +I +NK+D
Sbjct: 183 FESNL-SIIPVINKID 197
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIYKCGGIDK 145
N +I HVD GKST L+ G I K
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK 86
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 300 IIDAPGHRDFIKNMITGTSQADCAVLIV 383
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +3
Query: 300 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 479
+ID PGH F G S D AV++V + G+ K QT E L V+ +
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV-----DIMHGLEK--QTVETLALLKDRNVRFI 559
Query: 480 IVGVNKMD 503
+V +NK+D
Sbjct: 560 VV-LNKVD 566
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 62 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 160
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 288 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
Y + +ID PGH DF + + + A+L+V A G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 133
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 282 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 383
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 300 IIDAPGHRDFIKNMITGTSQADCAVLIV 383
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>04_04_0214 - 23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 28.7 bits (61), Expect = 3.6
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +3
Query: 183 WVKDPSNMLGYWTN*RLSVSXYHNDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 362
W+ PS+ +GYW N +S + N + K +K + D G ITG +
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFNQL---KNHPNKKFTRTGDL-GRTIDGNLFITGRIKD 931
Query: 363 DCAVLIVAAGTGEFEAGISKNGQTREHAL 449
LI+ AG + A + K ++ L
Sbjct: 932 ----LIIVAGRNIYSADVEKTVESSSEVL 956
>06_01_0501 -
3587390-3587528,3587922-3588031,3588122-3588187,
3588293-3588410,3588499-3588554,3588647-3588766,
3588937-3589035,3589443-3589490,3589534-3589545,
3590353-3590418,3591412-3591471,3592061-3592162,
3592405-3592426,3592959-3593041,3593166-3593293,
3593775-3593881,3594376-3594845
Length = 601
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 245 PTHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 147
PT PL+ P P + +L PF P+R+ WY
Sbjct: 41 PTTRAPLL-PSPPRLPPLLVPFAAVPARSFSWY 72
>04_04_1324 + 32659752-32661972,32662067-32662761
Length = 971
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +3
Query: 237 VSXYHNDIALWKFETSKYYVTIIDA---PGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 407
V+ + ND+ W Y T D P ++ + ++ +++ L + GE
Sbjct: 133 VTKHVNDLRCWLSSVMTYIYTCADGFDKPELKEAMDKLLQNSTELSSNALAIITSLGELM 192
Query: 408 AGISKNGQTREHALL 452
NG T H L
Sbjct: 193 PAAKSNGSTGAHRRL 207
>04_01_0131 - 1433821-1434564,1435509-1435751
Length = 328
Score = 28.3 bits (60), Expect = 4.7
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ-TREHALLAFTLGV 470
VT I H++ +K I GTS C AAG G +SK T ++ + +
Sbjct: 52 VTTISEARHKNLLKGDIAGTSSISC-----AAGVG--IVPLSKTTSITNTEGVIGYIRSI 104
Query: 471 KQLIV-GVNKMDSTNHHTVSPXLRHQE 548
+ I G+ S HH P + +++
Sbjct: 105 RYNIAKGIGSALSYLHHDCKPYILYRD 131
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 50 KTHINIVVIGHVDSG 94
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>01_01_0016 - 88825-90411
Length = 528
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -3
Query: 455 SEQGMLTGLTVLRDTSFEFTGTGSYDEHSA 366
+ +G+L L+V+ F+ TGT + D+H A
Sbjct: 249 ARRGLLPALSVIEPRYFDLTGTPADDDHPA 278
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,325,468
Number of Sequences: 37544
Number of extensions: 308972
Number of successful extensions: 811
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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