Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060800.seq
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.5  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    23   7.2  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    23   7.2  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   9.5  
AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.          23   9.5  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -2

Query: 276 RTSREQYHCDTXSRSAFSLSNTQAYLKDPLPISWASFSNFSMVR 145
           RT  +++H          ++ T+ +L D +P +    +NFS+ R
Sbjct: 91  RTKTKEFHLAVSEADFDLIALTETWLVDNIPSALLFNNNFSVYR 134


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 267 WKFETSKYYVTIIDAPG 317
           W +E  K+  T+I+ PG
Sbjct: 487 WNYEDYKFRTTVINMPG 503


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = -1

Query: 469 TPRVKASKACSRV*PFLEIPASNSPVPAATMSTAQSA*EVP 347
           T R  AS   S   P   IPA + PVPA      QS   +P
Sbjct: 354 TSRPVASGPTSHYYPS-HIPAGSQPVPAVVNPHQQSRPTIP 393


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 449 ARFHPRCQTAHRXSKQNGFHEPPYS 523
           ARF P   T+HR S  N     P S
Sbjct: 344 ARFDPSALTSHRSSSANCSSAAPKS 368


>AY341206-1|AAR13770.1|  196|Anopheles gambiae SP14D1 protein.
          Length = 196

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 246 YHNDIALWKFETSKYYVTIIDA 311
           +HNDIAL +F     Y + I A
Sbjct: 46  HHNDIALIRFNREINYSSTISA 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,401
Number of Sequences: 2352
Number of extensions: 10930
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)