Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060800.seq
(583 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 186 1e-49
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 186 1e-49
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 186 1e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 181 4e-48
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 37 2e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.95
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.2
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.9
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 8.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.9
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 8.9
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 8.9
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 8.9
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 186 bits (454), Expect = 1e-49
Identities = 93/110 (84%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTNHHTVSPXLRHQEGSI-SYIKKIGY 581
REHALLAFTLGVKQLIVGVNKMDST + + SYIKKIGY
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 110
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 186 bits (454), Expect = 1e-49
Identities = 93/110 (84%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 17 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 76
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTNHHTVSPXLRHQEGSI-SYIKKIGY 581
REHALLAFTLGVKQLIVGVNKMDST + + SYIKKIGY
Sbjct: 77 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 126
Score = 27.5 bits (58), Expect = 0.10
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 209 WVLDKLKAERE 241
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 186 bits (454), Expect = 1e-49
Identities = 93/110 (84%), Positives = 95/110 (86%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTNHHTVSPXLRHQEGSI-SYIKKIGY 581
REHALLAFTLGVKQLIVGVNKMDST + + SYIKKIGY
Sbjct: 134 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 183
Score = 145 bits (352), Expect = 2e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 218 DKLKAERE 241
DKLKAERE
Sbjct: 61 DKLKAERE 68
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 181 bits (441), Expect = 4e-48
Identities = 90/110 (81%), Positives = 94/110 (85%), Gaps = 1/110 (0%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTNHHTVSPXLRHQEGSI-SYIKKIGY 581
REHALLAFTLGVKQLIVGVNKMD T+ + + SYIKKIGY
Sbjct: 134 REHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGY 183
Score = 145 bits (352), Expect = 2e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +2
Query: 38 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 217
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 218 DKLKAERE 241
DKLKAERE
Sbjct: 61 DKLKAERE 68
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 36.7 bits (81), Expect = 2e-04
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 473
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 474 QLIVGVNKMDSTN 512
+IV +NK+D N
Sbjct: 247 PIIVAINKIDKPN 259
Score = 25.4 bits (53), Expect = 0.41
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 50 KTHINIVVIGHVDSGKST 103
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.95
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 59 INIVVIGHVDSGKST 103
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 51 FSLPIFG*SRITNCV*Y 1
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 279 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 380
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 279 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 380
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 DKRTIEKFEKEAQEMG 187
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 8.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 440 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 354
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 DKRTIEKFEKEAQEMG 187
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 8.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 140 DKRTIEKFEKEAQEMG 187
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 8.9
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2
Query: 188 KGSFKYAWVLDKLKAEREXVS 250
KGS W LD A E +S
Sbjct: 209 KGSIARCWSLDSTAASDEDIS 229
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,950
Number of Sequences: 438
Number of extensions: 2955
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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