Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060799.seq
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 99 1e-21
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 88 6e-18
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 70 1e-12
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 63 2e-10
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 63 2e-10
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 62 3e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 62 5e-10
08_01_0397 - 3509186-3510291,3510322-3512335 59 3e-09
03_05_0865 - 28365430-28367640 46 3e-05
06_03_1255 + 28780181-28781172,28782065-28782932 44 8e-05
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 44 1e-04
02_01_0381 - 2764331-2764342,2768966-2769907 44 1e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 44 1e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 42 6e-04
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 41 7e-04
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 40 0.002
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 39 0.004
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 38 0.005
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 38 0.007
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 37 0.016
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 36 0.028
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 36 0.028
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 36 0.028
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 36 0.036
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 36 0.036
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 35 0.048
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 34 0.084
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 34 0.084
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 34 0.11
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 34 0.11
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 34 0.11
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 34 0.11
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 33 0.15
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 32 0.34
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 32 0.34
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 32 0.34
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 32 0.45
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 31 0.78
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557... 30 1.4
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 30 1.4
07_03_0460 + 18425464-18427473 30 1.4
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 30 1.4
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 30 1.8
03_02_0189 - 6253659-6255380 29 2.4
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 29 2.4
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 29 2.4
10_08_0429 + 17845303-17845431,17845508-17845684,17845782-178458... 28 5.5
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 28 5.5
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 7.3
04_04_0308 + 24286923-24286927,24288430-24288907,24288980-242890... 28 7.3
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 7.3
01_03_0075 - 12218501-12218611,12219028-12219267,12219698-122198... 28 7.3
11_08_0089 - 28288129-28288832,28290702-28290831,28291563-282918... 27 9.7
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 27 9.7
01_04_0011 + 15067536-15068236,15068283-15068898 27 9.7
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 99 bits (238), Expect = 1e-21
Identities = 44/89 (49%), Positives = 57/89 (64%)
Frame = +1
Query: 250 PSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 429
P D SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 430 YVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
Y Q + G+ EPTPIQ+QGWP+A+ R
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGR 194
Score = 62.5 bits (145), Expect = 3e-10
Identities = 23/44 (52%), Positives = 36/44 (81%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLA 641
G++++G+ +TGSGKTL+Y+LP +VH+ QP + + DGPI L+LA
Sbjct: 193 GRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILA 236
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 87.8 bits (208), Expect = 6e-18
Identities = 40/94 (42%), Positives = 57/94 (60%)
Frame = +1
Query: 235 SEHASPSWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 414
++ A+ + D L F KNFY P+V + EVE YR E+TV G +V P++ F +
Sbjct: 36 ADSAAAAADLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRD 95
Query: 415 ANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
FP+YV Q + G+ EPTPIQ+QGWP+A+ R
Sbjct: 96 VGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGR 129
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLA 641
G++L+G+ +TGSGKTLAY+LPAIVH+N QP + DGPI LVLA
Sbjct: 128 GRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLA 171
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/85 (36%), Positives = 48/85 (56%)
Frame = +1
Query: 262 SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ 441
++ +PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP +
Sbjct: 173 TIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMN 232
Query: 442 GVKTMGYKEPTPIQAQGWPIAMLER 516
+ GY++PT IQ Q PI + R
Sbjct: 233 AIAKQGYEKPTTIQCQALPIVLSGR 257
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLA 641
G++++G+ KTGSGKT A++LP IVHI +QP + + +GPI +V A
Sbjct: 256 GRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCA 299
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +1
Query: 241 HASPSWDSVSLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEA 417
H + S++P ++ F P+ P++ + YR +HEVT G V P FE
Sbjct: 555 HNHGPFPEASMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEAT 609
Query: 418 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYSK 537
FP + Q + G+ PTPIQAQ WP+A+ R +A +K
Sbjct: 610 GFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAK 649
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +3
Query: 513 KNLVGVLKTGSGKTLAYILPAIVHI---NNQPPIRRSDGPIALVLA 641
+++V + KTGSGKTL Y++PA +H+ N P + GP LVLA
Sbjct: 642 RDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPML----GPTVLVLA 683
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +1
Query: 340 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 507
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIAL 185
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3
Query: 513 KNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLA 641
+++V + KTGSGKTL Y+LP +HI RS GP LVLA
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRS-GPTVLVLA 229
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +1
Query: 340 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI 519
E YR HE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ R
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 520 *LAYSK 537
+A +K
Sbjct: 220 IVAVAK 225
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 513 KNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLA 641
+++V V KTGSGKTL Y++P + + R DGP LVL+
Sbjct: 218 RDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR-DGPTVLVLS 259
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 61.7 bits (143), Expect = 5e-10
Identities = 23/44 (52%), Positives = 35/44 (79%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLA 641
G++ +G+ KTGSGKTLA++LP + H+ +QPP+ DGPI L++A
Sbjct: 322 GRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMA 365
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ QPF KN Y + + EV YR N E+ V G +V PI+ + ++ +
Sbjct: 240 IEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDT 299
Query: 445 VKTMGYKEPTPIQAQGWPIAMLER 516
+K +G+++P PIQAQ PI M R
Sbjct: 300 IKKLGFEKPMPIQAQALPIIMSGR 323
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPI 626
K G ++ + + L G++ +G+ KTGSGKTLA++LP + H+ +QP + DGPI
Sbjct: 440 KKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPI 499
Query: 627 ALVLA 641
L++A
Sbjct: 500 GLIMA 504
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 265 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 444
+ QPF KNFY + K + EV YR E+ V G +V PI+ + ++ +
Sbjct: 379 IDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDT 438
Query: 445 VKTMGYKEPTPIQAQGWPIAMLER 516
+K +G+++P IQAQ PI M R
Sbjct: 439 IKKLGFEKPMSIQAQALPIIMSGR 462
>03_05_0865 - 28365430-28367640
Length = 736
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/46 (41%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 513 KNLVGVLKTGSGKTLAYILPAIVHINNQPPI---RRSDGPIALVLA 641
++++G+ +TGSGKT A++LP + +I PPI ++GP A+V+A
Sbjct: 353 RDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMA 398
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 346 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
+R + ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + +R
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQR 353
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 PTVLKRSPYE-VEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 483
P L+R P + R + + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 484 AQGWPIAMLER 516
QG P+A+ R
Sbjct: 201 VQGLPVALSGR 211
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQP---PIRRSD 617
+ G+++ L + G++++G+ TGSGKTL ++LP I+ + PI +
Sbjct: 189 RGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGE 248
Query: 618 GPIALVL 638
GP L++
Sbjct: 249 GPFGLIV 255
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Frame = +3
Query: 504 YVGKNLVGVLKTGSGKTLAYILPAIVHINNQPPI--RRSDGPIALVL 638
Y+GK+++ KTG+GKT+A++LPAI ++ PPI + PI++V+
Sbjct: 490 YIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVV 536
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 PTVLKRSPY-EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 483
P L+R P + +E R + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 484 AQGWPIAMLER 516
QG P+ + R
Sbjct: 210 VQGLPVVLSGR 220
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAI-VHINNQ--PPIRRSDGPIALVL 638
G++++G+ TGSGKTL ++LP I V + + PI +GP +++
Sbjct: 219 GRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMII 264
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +3
Query: 429 LCATRCKDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHI--NNQPP 602
LCA G Q + + + G++++ TG+GKTLAY+ P IVH+ +P
Sbjct: 34 LCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPR 92
Query: 603 IRRSDGPIALVL 638
+ R+DG ALVL
Sbjct: 93 VERTDGTFALVL 104
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
V VSG +V P FE A + V + V GY+ PTP+Q PIA+ R
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAI 578
G++L+ +TGSGKT A+ LP +
Sbjct: 121 GRDLMACAQTGSGKTAAFCLPVV 143
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRR 611
KD G +R + L GK+++ KTG+GKT+A++LPAI ++ P RR
Sbjct: 22 KDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRR 76
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 334 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLE 513
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 514 R 516
R
Sbjct: 220 R 220
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +3
Query: 492 LADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSD--GPIALVLA 641
+ S ++L+ TGSGKT ++++P I H ++ R +D GP+A+VLA
Sbjct: 213 IPSSICNRSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLA 264
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALV 635
GK+++G KTGSGKTLA+++PAI +++ + R+ + +V
Sbjct: 133 GKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVV 174
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 349 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
R ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI + R
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHI 587
G+ TGSGKTLA++ P ++ I
Sbjct: 183 GRECFACAPTGSGKTLAFLFPILMKI 208
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAL 644
G++ +G+ TGSGKT+A+ +PA++H+ + + + + VL L
Sbjct: 129 GRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVL 173
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 394 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 498
P+ F P V K G++ P+PIQA WP
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWP 124
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQP 599
KD G ++ + L G++++ KTG+GKT+A++LPAI ++ P
Sbjct: 90 KDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLP 140
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 35.9 bits (79), Expect = 0.028
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +3
Query: 492 LADSYVGKNLVGVLKTGSGKTLAYILPAIV 581
L + G++++G KTGSGKTLA+++P ++
Sbjct: 111 LPHALCGRDVLGAAKTGSGKTLAFVIPVLM 140
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +3
Query: 501 SYVGKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDG-----PIALVLA 641
S G++L+ +TGSGKT A+ P I I P RS G P+AL+L+
Sbjct: 357 SIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILS 408
Score = 34.3 bits (75), Expect = 0.084
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
V SG +V P F E + D + + ++ Y +PTP+Q PI++ R
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGR 361
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 35.9 bits (79), Expect = 0.028
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
V SG +V P+ F E + D + + ++ Y +PTP+Q PI++ R
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGR 275
Score = 35.9 bits (79), Expect = 0.028
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Frame = +3
Query: 501 SYVGKNLVGVLKTGSGKTLAYILPAIVHI-NNQPPIR----RSDGPIALVLA 641
S G++L+ +TGSGKT A+ P I I +++PP R R+ P+AL+L+
Sbjct: 271 SIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALILS 322
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 35.5 bits (78), Expect = 0.036
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAY---ILPAIVHINNQPPIRRSDG--PIALVLA 641
GK++VG KTG+GKTLA+ IL AI+ N + S G P+A+VLA
Sbjct: 135 GKDMVGRAKTGTGKTLAFGIPILDAIIRHNE----KNSPGKFPLAIVLA 179
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 35.5 bits (78), Expect = 0.036
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 444 CKDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQP 599
C G++ A + + G++++G+ +TGSGKT A+ LP + + P
Sbjct: 92 CDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDP 143
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 501 SYVGKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRR 611
S G++L+ +TGSGKT A+ P I I PP +R
Sbjct: 189 SLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQR 225
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +1
Query: 364 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
V SG EV P+ F E + + ++ Y PTP+Q PI++ R
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGR 193
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 34.3 bits (75), Expect = 0.084
Identities = 14/28 (50%), Positives = 22/28 (78%)
Frame = +3
Query: 495 ADSYVGKNLVGVLKTGSGKTLAYILPAI 578
A ++ GK+++G +TGSGKTLA+ LP +
Sbjct: 175 AAAHQGKDVIGAAETGSGKTLAFGLPIL 202
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 445 VKTMGYKEPTPIQAQGWPIA 504
V+ +G+KEPTPIQ +P A
Sbjct: 157 VRRLGFKEPTPIQKACFPAA 176
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 34.3 bits (75), Expect = 0.084
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAI 578
GK++V KTGSGKT AY+LP +
Sbjct: 120 GKDVVAKAKTGSGKTFAYLLPML 142
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINN--QPPIRRSD---GPIALVL 638
G +LVG +TG GKTLA++LP + + N RR+D P LVL
Sbjct: 141 GHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVL 188
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 429 LCATRCKDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAI 578
L A +D + + +G +++ KTGSGKTLA+++PAI
Sbjct: 96 LTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAI 145
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQP---PIRRSDGPIALVLA 641
G++L+ KTG+GKTLA+ +P I + + +RR P LVLA
Sbjct: 167 GRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLA 213
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINN 593
D G +T + L GK+++ KTG+GK+ A++LPAI + N
Sbjct: 359 DAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLN 406
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSD-GPIALVLA 641
GK+++G +TG+GKTLA+ +P + I S P+A++LA
Sbjct: 130 GKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILA 174
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAM 507
FE + V +GV+ GY+ PTPIQ + P+ +
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLIL 61
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAI 578
G ++ + +TGSGKT A+++P I
Sbjct: 63 GHDIAAMARTGSGKTAAFLVPMI 85
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAI 578
G++++GV +TGSGKT A+ LP I
Sbjct: 20 GRDVIGVGQTGSGKTAAFALPII 42
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 444 CKDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAI 578
C G + + + + G++L+G+ +TGSGKT A+ LP I
Sbjct: 56 CDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 444 CKDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQP 599
C+ G Q+ ++ + + G+++ G TGSGKT A+ LP + + +P
Sbjct: 209 CEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRP 260
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLER 516
F E N + + + +GY++PTPIQA P+A+ R
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGR 232
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQ 596
+ G +R + + G +++ K G+GKT A+ +PA+ I+ +
Sbjct: 151 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQE 199
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYSKRVPAK 552
FE+ + G+ G++ P+PIQ + PIA+ LA +K K
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 184
>11_08_0102 -
28354880-28355056,28355159-28355376,28355634-28355712,
28356451-28356519,28356602-28356681,28356818-28356925,
28357103-28357169,28357894-28357959,28358042-28358119,
28358198-28358250,28359542-28359575,28359851-28359865,
28360082-28360109,28360628-28360716,28361688-28361810,
28362192-28362296,28362381-28362485,28362924-28363139,
28364656-28364845,28365193-28365418,28366096-28366162
Length = 730
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVH 584
G++++ ++ G GK+L Y LPA++H
Sbjct: 120 GRDVLVIMAAGGGKSLCYQLPAVLH 144
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHIN 590
+ G +R + + G +++ K G+GKT A+ +PA+ I+
Sbjct: 164 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 210
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYSKRVPAK 552
FE+ + G+ G++ P+PIQ + PIA+ LA +K K
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 197
>07_03_0460 + 18425464-18427473
Length = 669
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 482 KLKAGR*LCWKEFSWRTQNGFRQNVGLHLASHCAHK 589
+L GR + K+++WRTQ F + V + S C+HK
Sbjct: 109 RLDDGRSVAVKQYNWRTQKEFTKEV--IIQSQCSHK 142
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 450 DNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHIN 590
+ G +R + + G +++ K G+GKT A+ +PA+ I+
Sbjct: 141 EKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID 187
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 406 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMLERI*LAYSKRVPAK 552
FE+ + G+ G++ P+PIQ + PIA+ LA +K K
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGK 174
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAI-VHINN 593
G ++V TGSGKTLAY+LP + + I N
Sbjct: 147 GTSVVLGSHTGSGKTLAYLLPLVQIEIEN 175
>03_02_0189 - 6253659-6255380
Length = 573
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 537 TGSGKTLAYILPAIVHINNQPPIRR 611
TGSGKTLAY+LP + I P++R
Sbjct: 177 TGSGKTLAYLLPILSEIG---PLKR 198
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3
Query: 537 TGSGKTLAYILPAIVHINNQPPIRR 611
TGSGKTLAY+LP + I P++R
Sbjct: 639 TGSGKTLAYLLPILSEIG---PLKR 660
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +3
Query: 447 KDNGLQRTDAYSSSRLADSYVGKNLVGVLKTGSGKTLAYILPAIVHINNQP 599
K G +R ++ + K++ TGSGKTLA+++P + + +P
Sbjct: 39 KGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRP 89
>10_08_0429 +
17845303-17845431,17845508-17845684,17845782-17845895,
17846386-17846520,17847659-17847790,17847919-17848071,
17848574-17848709,17849338-17849443,17849538-17849730,
17849803-17849963,17850227-17850442,17850732-17850997,
17851505-17851779,17851871-17852327,17853973-17854055,
17854260-17854469,17854897-17855373,17855462-17855743,
17855910-17856236,17856418-17856507,17856788-17856899,
17857004-17857104,17857524-17857568
Length = 1458
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 516 NLVGVLKTGSGKTLAYILPAIVHINNQPPIRRSDGPIALVLAL 644
N + VL TGSGKT+ ++ A H +R + P +V+ L
Sbjct: 54 NTIAVLDTGSGKTMVAVMLAREHARR---VRAGEAPRRIVVFL 93
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIVHINNQ 596
GK+ + ++GSGKTLAY+ P + ++ +
Sbjct: 277 GKSCIIGDQSGSGKTLAYLCPVVQNLRKE 305
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 283 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 405
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>04_04_0308 +
24286923-24286927,24288430-24288907,24288980-24289099,
24289182-24289235,24289467-24289579,24289799-24290011,
24290123-24290201,24290323-24290376,24290448-24290522,
24291029-24291193,24291843-24291941,24292186-24292241,
24292331-24292433,24293289-24293417,24293657-24293835,
24293953-24293977,24294060-24294175,24294252-24294342
Length = 717
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 510 GKNLVGVLKTGSGKTLAYILPAIV 581
G++ + VL TG+GK+L Y +PA++
Sbjct: 143 GESTMLVLPTGAGKSLCYQVPAMI 166
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 325 SPYEVEEYRNNHEVTVSGVEVHN 393
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>01_03_0075 -
12218501-12218611,12219028-12219267,12219698-12219815,
12219949-12220016,12220124-12220375,12221362-12221463,
12221734-12221802,12221892-12221987,12222161-12222208,
12222352-12222479,12222818-12222896,12223651-12223797,
12223956-12224022,12224655-12224830,12225588-12225755,
12225879-12225992,12226657-12226722,12227306-12227524,
12228142-12228321,12228481-12228584,12228998-12229277,
12230582-12231004
Length = 1084
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 513 KNLVGVLKTGSGKTLAYILPAIVH 584
K + +KTG GKTL ILPA ++
Sbjct: 172 KGEIAEMKTGEGKTLVAILPAYLN 195
>11_08_0089 -
28288129-28288832,28290702-28290831,28291563-28291856,
28292000-28292098,28292199-28292285,28292524-28292805
Length = 531
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -1
Query: 564 CRPTFCRNPF*VRQLNSFQHSYRPALSLNR---RRFFVTHC 451
CRPT + F ++ ++Y A SLNR +R+ +T C
Sbjct: 486 CRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYLITFC 526
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 537 TGSGKTLAYILPAI 578
TGSGKTLAY LP +
Sbjct: 83 TGSGKTLAYALPIV 96
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 254 VGILFHSNLSTKTFMIHILQFSKDHHMKSKSTE 352
V ++ NLS K + +L+ +K+ H+ SKST+
Sbjct: 189 VVVIVGCNLSGKEVALELLRVAKEVHLSSKSTK 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,084,939
Number of Sequences: 37544
Number of extensions: 315667
Number of successful extensions: 811
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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