Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060797.seq
(657 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 114 1e-26
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 81 1e-16
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 79 4e-16
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 67 2e-12
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 65 1e-11
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 64 2e-11
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 59 5e-10
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 57 2e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 50 2e-07
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 44 3e-05
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 43 4e-05
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 41 1e-04
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 41 1e-04
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 38 0.002
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 37 0.002
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 35 0.012
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 31 0.15
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 31 0.19
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 29 0.45
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.78
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 28 1.0
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 27 1.8
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 1.8
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 1.8
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 3.1
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 26 4.2
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.5
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 25 7.3
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 25 9.6
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 25 9.6
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 9.6
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 9.6
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 114 bits (274), Expect = 1e-26
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +3
Query: 66 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 245
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ESKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 246 IWD 254
IWD
Sbjct: 63 IWD 65
Score = 105 bits (251), Expect = 7e-24
Identities = 51/89 (57%), Positives = 63/89 (70%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGAL+VYDI K S++NV RWL+ELR+HAD NI+IMLVGNK+DL HLR++ TEEA+AFA
Sbjct: 84 VGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAA 143
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
N LSFI +T TEI+
Sbjct: 144 ENNLSFIETSAMDASNVEEAFQTVLTEIF 172
Score = 39.1 bits (87), Expect = 6e-04
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 67 AGQERYRAITSAYYRGA 83
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 81.4 bits (192), Expect = 1e-16
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ E++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Score = 53.2 bits (122), Expect = 3e-08
Identities = 23/66 (34%), Positives = 42/66 (63%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYD+ S+ NV++WL+E+ +A + + +LVGNKSD+ + + AK FA++
Sbjct: 83 GIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADS 142
Query: 490 NGLSFI 507
+ F+
Sbjct: 143 LNIPFL 148
Score = 34.7 bits (76), Expect = 0.012
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 65 AGQERFRTITSSYYRGA 81
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAF 548
F TSA DSTNVE AF
Sbjct: 147 FLETSAKDSTNVEQAF 162
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 79.4 bits (187), Expect = 4e-16
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+IE+DGK IK QIWD
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Score = 58.4 bits (135), Expect = 8e-10
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G LL+YD+ S++NV W + HA +N+ +L+GNK D R + E+ +A A+
Sbjct: 83 MGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALAD 142
Query: 487 ANGLSFI 507
G+ F+
Sbjct: 143 ELGVKFL 149
Score = 35.1 bits (77), Expect = 0.009
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWARCWF---TTSPSTCRTRTW 361
AGQER+R IT+AYYRGA T S RTW
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTW 103
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 66.9 bits (156), Expect = 2e-12
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV----DGKTI 236
++ YDYL K+VL G SG GKS LL RF +N+++ + T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 237 KAQIWD 254
K QIWD
Sbjct: 63 KLQIWD 68
Score = 58.0 bits (134), Expect = 1e-09
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GA+LVYD+ S+E + WL ++R A I ++L G+KSDL++ R + TEEA F
Sbjct: 88 GAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQRQVSTEEAAEFCSE 147
Query: 490 NGLS 501
+S
Sbjct: 148 KHIS 151
Score = 28.3 bits (60), Expect = 1.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQE++R++ YYRGA
Sbjct: 70 AGQEKFRSVARNYYRGA 86
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 64.9 bits (151), Expect = 1e-11
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
KVV++GDSGVGK+ L+++F +F+ E K+TIG +F T+ + VD K + Q+WD
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWD 63
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER++++ A+YRGA
Sbjct: 65 AGQERFQSLGMAFYRGA 81
Score = 25.8 bits (54), Expect = 5.5
Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSD 435
++VY++ S+++VE W +E Q+ ++VGN+ D
Sbjct: 85 VIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID 127
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 64.1 bits (149), Expect = 2e-11
Identities = 23/57 (40%), Positives = 43/57 (75%)
Frame = +3
Query: 84 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+L KV+++G+SGVGK+S+++++ +F+ + K+TIG +F T+ + VD K + Q+WD
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWD 63
Score = 33.1 bits (72), Expect = 0.036
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDL-RHLRSIPTEEAKAF 480
+LVYD+ S+E ++ W E A + +L+GNK D+ R + +A AF
Sbjct: 85 VLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEEQKRMVSKSKALAF 144
Query: 481 AEANG 495
+A G
Sbjct: 145 CQARG 149
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER++++ A+YRGA
Sbjct: 65 AGQERFQSLGVAFYRGA 81
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 59.3 bits (137), Expect = 5e-10
Identities = 27/55 (49%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIWD 254
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWD
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWD 70
Score = 52.0 bits (119), Expect = 7e-08
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAF-AE 486
A++VYDI + S E + W++EL+ A + I+I L GNK DL + R++ +A+A+ AE
Sbjct: 91 AIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAE 150
Query: 487 ANGLSF 504
AN L F
Sbjct: 151 ANLLFF 156
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERY+++ YYR A
Sbjct: 72 AGQERYKSLAPMYYRNA 88
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 57.2 bits (132), Expect = 2e-09
Identities = 20/55 (36%), Positives = 43/55 (78%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WD
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 66
Score = 56.4 bits (130), Expect = 3e-09
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
A++VYDI H S+ N E+W+ ++R +++I+LVGNK+DL R + EE + A+
Sbjct: 87 AIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAK 144
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 50.4 bits (115), Expect = 2e-07
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
KV +IGDS +GK+SL+ + + F+ ES T+GV F ++I + I IWD
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWD 65
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 43.6 bits (98), Expect = 3e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+SLLS FT F E T+ + + VDGK+++ +WD
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWD 62
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 42.7 bits (96), Expect = 4e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WD
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWD 67
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+VL+GD G GK++ + R EF + +T+GVE + I +WD
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWD 64
Score = 36.7 bits (81), Expect = 0.003
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 441
++++D+ ++Y+NV W R+L +NI I+L GNK D++
Sbjct: 86 IIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVK 126
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 41.1 bits (92), Expect = 1e-04
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 277 RHHVGVLPRRVGALLVYDIAKHLSYENVERWLRELRDHADQN-ILIMLVGNKSDLRHLRS 453
+H +G+ G +LVY I S+E V+ ++ +H + I++VGNKSDL R+
Sbjct: 73 KHSIGIH----GYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRA 128
Query: 454 IPTEEAKAFA 483
+ EE KA A
Sbjct: 129 VTAEEGKALA 138
Score = 28.7 bits (61), Expect = 0.78
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
++ ++G VGKSSL ++ N F TI F +++I+ G+ +I D
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF-SKNIKYKGQEFATEIID 60
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+ LL F++ F T+ E +EVDG+ I+ +WD
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWD 60
Score = 29.5 bits (63), Expect = 0.45
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRH 444
L+ + + S +NV E+W+ E+ H N+ I+LVG K DLR+
Sbjct: 82 LICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+ LL F++ F T+ E +EVDG+ ++ +WD
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWD 60
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 34.7 bits (76), Expect = 0.012
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V++GD GVGKS+L + ++ F E TI + + E+DG+ + D
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSY-RKKCEIDGEGALLDVLD 62
Score = 32.7 bits (71), Expect = 0.048
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNIL-IMLVGNKSDLRHLRSIPTEEAKAFAE 486
G LLVY+I S++ + + +++ D++ ++LV NK DL R + E + A+
Sbjct: 82 GFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAK 141
Query: 487 A 489
+
Sbjct: 142 S 142
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 31.1 bits (67), Expect = 0.15
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR-SIEVDGKTIKAQIWD 254
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WD
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWD 70
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 30.7 bits (66), Expect = 0.19
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA 203
K V++GD VGK+ LL +T N+F + T+ +A
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYA 41
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.5 bits (63), Expect = 0.45
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNE 161
+VV+ GD GVGKSSL+S + +
Sbjct: 5 RVVICGDQGVGKSSLISALIQED 27
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 75 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI--GVEF 200
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 227
VV+ G SGVGKS+LL R ++ + S R+ E DG
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDG 64
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Frame = -1
Query: 414 HDEDVLVGVVAQLAQPPLHVLVRQVLGD--VVNQQRAHAPR*YADVMAR-YRSWPAGPI 247
HD+++LVG + QP HV+ +L D + R R +A+ +R S P GP+
Sbjct: 107 HDQEMLVGPRTKEGQPGYHVVTPFILDDGRRILVNRGWIARSFAEQSSRDPSSLPKGPV 165
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 275 RAITSAYYRGAWARCWFTTSPSTCRTRTWSGGCASCATTPTRTSSSC 415
RA AY G WA S+ T T S S TT T ++SC
Sbjct: 727 RAWYLAYAAGLWANDAVYYPVSSSSTTTTSTSTGSVTTTSTTATASC 773
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 51 TKMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 218
+K G + + +D L +V IG VGKS+LLS T+ + S + +E
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTKSATASYEFTTLTAIPGVLE 105
Query: 219 VDGKTIK 239
DG I+
Sbjct: 106 YDGAEIQ 112
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 196 STPMVDL--DSKLNSFLVKRDRRLLLPTPESPMS 101
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 139 RRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 41
R L+ P+P S +STT+NK + S+ + PE
Sbjct: 6 RILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 26.2 bits (55), Expect = 4.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 450 VHPDGGGESVRGSQRT*FYRTSALDSTNVEPAFQNILNRDLQDSCRSGRCATRPXVNVIR 629
+HPDG ++ G+Q + +S+L VE + L + R +N +
Sbjct: 651 LHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAVA 710
Query: 630 PDAEARRT 653
P ARR+
Sbjct: 711 PHYLARRS 718
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSR-FTRNEFNLESKSTIG 191
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPBC8D2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 122
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 357 VLVRQVLGDVVNQQRAHAPR 298
VLVR+V G ++RAH PR
Sbjct: 65 VLVREVAGSFRQRKRAHMPR 84
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 30 RLQSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSL 137
+L S+G + E +YD KVV I SG KSSL
Sbjct: 279 KLASTGYEYVCNVETDYDENSKVVSIPHSGPSKSSL 314
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.0 bits (52), Expect = 9.6
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 181 DLDSKLNSFLVKRDRRLLLPTPESPMSTTLNK*SYSSSLVPILVYPELCSRR 26
DL+SKL F RD+ L + T LN S+ S + L PE S +
Sbjct: 276 DLESKLYRFEEYRDKVATLELENEKIQTELN--SWKSLITNELPTPEAVSNK 325
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.0 bits (52), Expect = 9.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 277 RHHVGVLPRRVGALLVYDIAKHLSYE-NVER--WLRELRDHADQNILI 411
RH V + R + +V++ K L + NV WL +L D+ +QNI +
Sbjct: 869 RHAVIPVNNRYRSAVVFEFRKQLQRKHNVFAMVWLVDLEDNVEQNIRV 916
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 370 LRELRDHADQN---ILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
+RE+RDHA N +L++L L++ + P E +EA
Sbjct: 52 IREMRDHAFVNLEKLLLVLTSRLFALKNDKKFPNPETAPASEA 94
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/32 (28%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTR-NEFNLESKSTI 188
++++G+S +GK++ ++ F + N+ N K T+
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTM 152
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,518,673
Number of Sequences: 5004
Number of extensions: 50104
Number of successful extensions: 239
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 232
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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