Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060797.seq
(657 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 133 1e-31
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 118 4e-27
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 116 1e-26
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 1e-23
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 86 2e-17
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 79 3e-15
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 72 5e-13
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 69 3e-12
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 66 2e-11
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 66 3e-11
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 64 1e-10
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 64 1e-10
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 63 2e-10
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 62 5e-10
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 57 1e-08
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 55 4e-08
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 53 2e-07
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 53 2e-07
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 52 5e-07
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 51 7e-07
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 51 1e-06
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 49 3e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 46 3e-05
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 44 8e-05
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 44 8e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 44 1e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 41 8e-04
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 41 0.001
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 39 0.004
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 38 0.010
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 37 0.017
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 37 0.017
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 37 0.017
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 36 0.029
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 36 0.029
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 34 0.089
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 33 0.15
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 33 0.15
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 32 0.47
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.83
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 31 0.83
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 31 0.83
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 1.1
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 30 1.9
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 29 2.5
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 29 2.5
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 29 3.3
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 28 5.8
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.8
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_40957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 7.7
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 133 bits (321), Expect = 1e-31
Identities = 62/66 (93%), Positives = 66/66 (100%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 236
MGT++DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI+VDGKTI
Sbjct: 1 MGTKDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 60
Query: 237 KAQIWD 254
KAQIWD
Sbjct: 61 KAQIWD 66
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 118 bits (284), Expect = 4e-27
Identities = 53/60 (88%), Positives = 59/60 (98%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDIAKHL+YENVERWL+ELRDHAD NI+IMLVGNKSDLRHLR++PT+EAKAFAE
Sbjct: 7 VGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEAKAFAE 66
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 116 bits (280), Expect = 1e-26
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = +3
Query: 66 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 245
R D YDYL+K+VLIGDSGVGKSSLLSRFTRNEF++ESKSTIGVEFATRSI+V+GK IKAQ
Sbjct: 5 RYDHYDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQ 64
Query: 246 IWD 254
+WD
Sbjct: 65 VWD 67
Score = 89.8 bits (213), Expect = 2e-18
Identities = 36/67 (53%), Positives = 56/67 (83%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGA+LVYD+ K ++++VERWL E+R+HAD I++MLVGNK DL+HLR++ +++AK + +
Sbjct: 86 VGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDLKHLRAVASDDAKKYGD 145
Query: 487 ANGLSFI 507
+GL+FI
Sbjct: 146 EHGLAFI 152
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 69 AGQERYRAITSAYYRGA 85
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 107 bits (256), Expect = 1e-23
Identities = 46/62 (74%), Positives = 58/62 (93%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
ED YDYLFK+VLIGDSGVGKS+LLSR+T+NEF+L SK+TIGVE A R++E++GKT++AQI
Sbjct: 12 EDNYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQI 71
Query: 249 WD 254
WD
Sbjct: 72 WD 73
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
EYDYLFK++LIGDSGVGKSSLL RF + F+ STIGV+F R++ VDGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWD 63
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G +L+YD+ + ++ ++ +WL E+ ++A + + +LVGNK DL R + AK FAE
Sbjct: 83 GIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEK 142
Query: 490 NGLSFI 507
+SFI
Sbjct: 143 LDISFI 148
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R +T+AYYR A
Sbjct: 65 AGQERFRTLTTAYYRSA 81
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GNKSDL+HLR I K FA
Sbjct: 17 MGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMIENRRGKQFAA 76
Query: 487 ANGLSFI 507
+G+ F+
Sbjct: 77 EHGMLFM 83
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 263 QERYRAITSAYYRGA 307
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 74.5 bits (175), Expect = 7e-14
Identities = 29/61 (47%), Positives = 45/61 (73%)
Frame = +3
Query: 72 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 251
D+Y YLFK++L+GD+ VGK+ L+ +FT+ F TIGV+F ++++VDG+ +K QIW
Sbjct: 2 DDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIW 61
Query: 252 D 254
D
Sbjct: 62 D 62
Score = 47.6 bits (108), Expect = 9e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 474
G ++ YDI S+E++ +WL + + +++LI +VGNKSDL R + AK
Sbjct: 82 GVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLSTNRKVDFHHAK 136
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R+IT +YY A
Sbjct: 64 AGQERFRSITQSYYHNA 80
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
DY+FKV+++GD VGKSSL+ RF +EFN + +TIGV+F ++DGK +K Q+WD
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWD 65
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/67 (28%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
GALLV+D++ S++++ + WL E + + + +LVGNK D + + + E+ + +
Sbjct: 85 GALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDKKD-KKVSEEDIQNLSS 143
Query: 487 ANGLSFI 507
LS++
Sbjct: 144 CYNLSWL 150
Score = 27.9 bits (59), Expect = 7.7
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AG+E+YRA++ +++RGA
Sbjct: 67 AGEEKYRALSRSFFRGA 83
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 236
M +D Y FKV+++GD GVGK+SL+ RFT+ F S ST+GV+ TR +++ G +
Sbjct: 1 MKENDDNCKYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRV 60
Query: 237 KAQIWD 254
K Q WD
Sbjct: 61 KLQCWD 66
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHL-RSIPTEEAKAFAEAN 492
+LV+DI ++ ++ +WL ++ + ++NIL +LVGNK+DL+ R + T A AE
Sbjct: 88 ILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRSAANLAEFE 147
Query: 493 GLSFI 507
L ++
Sbjct: 148 ELLYL 152
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQE++R IT +YYR A
Sbjct: 68 AGQEKFRGITQSYYRNA 84
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSI 456
+GA+LVYDIAK S+ N+ +W+ ELR HA ++ I+L+GNKSDL+HLR I
Sbjct: 17 MGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLKHLRMI 66
Score = 35.1 bits (77), Expect = 0.051
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 263 QERYRAITSAYYRGA 307
QERYRAITSAYYRGA
Sbjct: 2 QERYRAITSAYYRGA 16
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/81 (51%), Positives = 50/81 (61%), Gaps = 21/81 (25%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFT--------------------RNEFNLESK-STIG 191
EYDYLFK++LIGDSGVGKS LL RF +++ ES STIG
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIG 63
Query: 192 VEFATRSIEVDGKTIKAQIWD 254
V+F R+IE+DGKTIK QIWD
Sbjct: 64 VDFKIRTIELDGKTIKLQIWD 84
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/66 (37%), Positives = 43/66 (65%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYD+ S+ NV++WL+E+ +A +N+ +LVGNK DL + + AK +AE+
Sbjct: 104 GIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAES 163
Query: 490 NGLSFI 507
G+ F+
Sbjct: 164 LGVPFL 169
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 86 AGQERFRTITSSYYRGA 102
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IKAQIW 251
+Y Y F+++LIGDS VGKSSLL +FT +F S T+GV+F R +E+ G IK QIW
Sbjct: 9 KYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIW 68
Query: 252 D 254
D
Sbjct: 69 D 69
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQ-NILIMLVGNKSDLRHLRSIPTEEAKAFA 483
VG L++YDI S+ NV W +E + ++ ++ MLVG+K D R + TEE + FA
Sbjct: 88 VGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKIDKESKRVVSTEEGECFA 147
Query: 484 EANGLSFI 507
EA+ + FI
Sbjct: 148 EAHNMMFI 155
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2
Query: 257 AGQERYRAITSAYYR 301
AGQER+R+IT +YYR
Sbjct: 71 AGQERFRSITYSYYR 85
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+FK+VL GD+ VGKSS + R RN F+ ST+GV+F +++ VDGKT Q+WD
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWD 497
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRS------IPTEEA 471
G LL+YD+ S+ +V W+ + + + + IML GNK D+R + I E
Sbjct: 517 GVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKTVITAESG 576
Query: 472 KAFAEANGLSFI 507
A+ +G FI
Sbjct: 577 SRLAKEHGALFI 588
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 242
TR + +FKVV IGDSGVGKSS L RF +++ +TIGV+F +++ V+G+ I
Sbjct: 888 TRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAI 947
Query: 243 QIWD 254
Q+WD
Sbjct: 948 QLWD 951
Score = 41.1 bits (92), Expect = 8e-04
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 438
G L+ YD+ S+ N+++W+ + + A++ + M++GNK+DL
Sbjct: 971 GILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDL 1013
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R+IT Y+R A
Sbjct: 953 AGQERFRSITKQYFRKA 969
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 63.7 bits (148), Expect = 1e-10
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +LVYD+ S+ N+ +WL+++ DHA++++ MLVGNK D+ R I + + A
Sbjct: 30 MGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNKCDMYDKRVISQTKGEQLAS 89
Query: 487 ANGLSFI 507
+ G+SFI
Sbjct: 90 SYGISFI 96
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+ IT+AYYRGA
Sbjct: 13 AGQERFHTITTAYYRGA 29
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWD
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWD 76
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYDI ++ + W++EL+ A NI+I L GNK+DL R + E+A+++AE N
Sbjct: 97 AIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASKRMVEYEDAQSYAEDN 156
Query: 493 GLSFI 507
GL F+
Sbjct: 157 GLLFM 161
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWARCW---FTTSPSTCRTRTW 361
AGQERY ++ YYRGA A T + R +TW
Sbjct: 78 AGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTW 115
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+ +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ + K +K QI
Sbjct: 15 DQNFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQI 74
Query: 249 WD 254
WD
Sbjct: 75 WD 76
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYR IT+AYYRGA
Sbjct: 78 AGQERYRTITTAYYRGA 94
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K++++G+SGVGKSSLL RFT + F+ + +TIGV+F +++ V+G K IWD
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWD 63
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSD 435
G +LVYD +++ +E WL E+ ++ ++I+ MLVGNK D
Sbjct: 83 GVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKID 125
Score = 31.9 bits (69), Expect = 0.47
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R +T +YYRGA
Sbjct: 65 AGQERFRTLTPSYYRGA 81
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 60.5 bits (140), Expect = 1e-09
Identities = 22/66 (33%), Positives = 43/66 (65%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G +LVYDI + +++N+ +WLR + +HA++++ M++GNK D+ R + E + A
Sbjct: 127 GIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIARE 186
Query: 490 NGLSFI 507
+G+ F+
Sbjct: 187 HGIRFL 192
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/37 (62%), Positives = 29/37 (78%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 188
YDYLFK++LIGDSGVGK+ +L RF+ + FN STI
Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GALLVYDI+ ++ ++ WL + R A NI+I+LVGNK DL R + EA FA+
Sbjct: 170 GALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQE 229
Query: 490 NGLSFI 507
N L F+
Sbjct: 230 NELMFL 235
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 171 ESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+S TIGVEF ++ + V GK++K QIWD
Sbjct: 123 DSSHTIGVEFGSKIVNVGGKSVKLQIWD 150
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R++T +YYRGA
Sbjct: 152 AGQERFRSVTRSYYRGA 168
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/55 (43%), Positives = 40/55 (72%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+++IGDS VGK+ L R +F +++TIGV+F +S+E++G+ +K Q+WD
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWD 101
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +1
Query: 301 RRVGALL-VYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAK 474
R V A++ +YDI + S+E + W+ E R HA ++ +L+GNK DL R++ + A+
Sbjct: 118 RNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDLGLERTVSSNIAR 177
Query: 475 AFAEANGL 498
FA+++ +
Sbjct: 178 KFADSHNM 185
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +3
Query: 102 LIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L D GVGKSSL++RF +F+ +S TIGVEF + +++DG++ QIWD
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWD 266
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
LLVY + S+ N+ W +E +AD N +L+GNK D+ R++ EEA ++
Sbjct: 288 LLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RAVSQEEADSWC 346
Query: 484 EANG 495
NG
Sbjct: 347 RQNG 350
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYDI K SY N+ +WL E+ +A + + ++LVGNK DL R + + A+ +A
Sbjct: 394 GVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKIDLDTDREVQPDAAQEWAAL 453
Query: 490 NGLSFI 507
+ + F+
Sbjct: 454 HDMPFV 459
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 212 YRGRR*DHKSSDMG-PAGQERYRAITSAYYRGA 307
Y R +K+ + G AGQER+R ITS+YYRGA
Sbjct: 360 YDRSRFQNKNDESGWEAGQERFRTITSSYYRGA 392
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V +GD GVGKSSL RF + F + + TIG++F T+++ +D ++ QIWD
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWD 218
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
AL+V+DI + S+E+V W++ +RD + +I++VGNK D R + + A+ AE
Sbjct: 239 ALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRRKVSYDVAEKSAERL 298
Query: 493 GLSFI 507
GLS++
Sbjct: 299 GLSYV 303
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/56 (39%), Positives = 37/56 (66%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
LFKVVL+G++GVGK+SL R N F ++TIG++ ++ +++ K + +WD
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWD 66
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWA 313
AG ER+R +T YYRGA A
Sbjct: 68 AGVERFRTVTKNYYRGAHA 86
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G LLVYDI S++++ +WL+ + D+A N+ +L+GNK D R I + ++ E
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGE 62
Query: 487 ANGLSF 504
N L F
Sbjct: 63 DNNLEF 68
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRS--IPTEEAKAFA 483
GA++V+D+ S+E V WL ++++H I ++LVGNK+D R L S IP+ A +A
Sbjct: 48 GAVIVFDVTDRKSFERVPTWLDKVQEHCGHEIPVVLVGNKTD-RPLNSWKIPSNVAAKYA 106
Query: 484 EANGLSFI 507
NG +I
Sbjct: 107 TNNGFLYI 114
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELR--DHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G LV+DI +++ + RW+ R AD NI ++LVGNK D+ R++ AK FA
Sbjct: 427 GVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKDMEDNRAVTYSRAKEFA 486
Query: 484 EANGLSFI 507
NG +I
Sbjct: 487 AMNGFPYI 494
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLE-SKSTIGV-EFATRSIEVDGKTI 236
+R+ +DY FK ++IG+SGVGKS L+++ F+L+ ST+ + + D K I
Sbjct: 342 SRQPNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKI 401
Query: 237 KAQIWD 254
K I D
Sbjct: 402 KLTIGD 407
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/53 (41%), Positives = 39/53 (73%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
V+L+GDS GK++LL+ + RN+FN + ++T+ +T ++EVDG+ I+ +WD
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLST-AVEVDGERIELTLWD 286
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 51.2 bits (117), Expect = 7e-07
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 474
G +LVYDI S+E + W+R + +HA Q++ M++GNK D+ R + E +
Sbjct: 87 GIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++ YDI K +++NV RW +++ +A +N + +LVGNK DL R + E+A A
Sbjct: 121 GVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCASH 180
Query: 490 NGL 498
G+
Sbjct: 181 YGM 183
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 510 TSALDSTNVEPAFQNILNRDLQDSCRSG 593
TSA D+TN+E AF L R+L++ C G
Sbjct: 189 TSAKDATNIEAAFYR-LARELKNRCEEG 215
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 257 AGQERYRAITSAYYR 301
AGQER+R IT +YYR
Sbjct: 103 AGQERFRTITQSYYR 117
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 72 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE-VDGKTIKAQI 248
++Y FKV+++GD GK S + R+ N ++ K TIGV+FA ++I+ TI+ QI
Sbjct: 13 NQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQI 72
Query: 249 W 251
W
Sbjct: 73 W 73
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+ ++T YY+GA
Sbjct: 76 AGQERFSSMTRVYYKGA 92
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
A+LVYDI ++ ++ W+REL+ + Q+I+I + GNK D R + ++A+ FA
Sbjct: 36 AILVYDITIESTFHSLRPWIRELQRYGPQDIVIAVAGNKCDKADQRDVQVQDAQDFA 92
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G ++VYD+ ++ NV+RWL E+ + D +++ +LVGNK D + + T + + F E
Sbjct: 52 GVIVVYDVTSADTFVNVKRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQKFGE 109
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +3
Query: 180 STIGVEFATRSIEVDGKTIKAQIWD 254
+TIGV+F R+I +DG+ +K QIWD
Sbjct: 8 TTIGVDFKIRTINIDGEKVKLQIWD 32
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 257 AGQERYRAITSAYYRG 304
AGQER+R ITS YYRG
Sbjct: 34 AGQERFRTITSTYYRG 49
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 474
G LLVYDI S++N++ WL +R + Q I+LVGNK D+ R +P + +
Sbjct: 58 GILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREVPKRKGE 112
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 215
++L K + +GDSGVGK+SLL ++T + FN TIG++F + +
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRV 148
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHA 393
+G LLV+D+ S+ N+ WL +L+ HA
Sbjct: 191 MGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 412 MLVGNKSDLRHLRSIPTEEAKAFAEANGLSF 504
+L+GNK+DL R + EA+A A+ GL +
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKY 500
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R++T+A++R A
Sbjct: 174 AGQERFRSLTTAFFRDA 190
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 188
T + +YLFKV++IGD GVGK+SL+ R+ F++ ++T+
Sbjct: 663 TAGERREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
D+++++ L+GD GVGK++LL RF + F E TI ++ +SI +D T+ +I D
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILD 59
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 403 ILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSF 504
I ++++GNKSDL R + +E + AE G F
Sbjct: 140 ISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLF 173
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRE-LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G LLVY + ++ +++ + LR +N+ I+LVGNKSD+ R + T AK F E
Sbjct: 77 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSTSNAKTFLE 136
Query: 487 AN 492
N
Sbjct: 137 TN 138
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+KVV++G GVGKS+L +F +F + TI +F + IEVD +I D
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILD 57
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Frame = +1
Query: 295 LPRRVGALLVYDIAKHLSYENVE---RWLRELRDHADQNILIMLVGNKSDLRHLRSIPTE 465
L + G ++VY I + ++E + + +RE++ LI+L GNK DL+H R++ +
Sbjct: 191 LSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHCRAVSRQ 250
Query: 466 EAKAFA 483
EA+ FA
Sbjct: 251 EAREFA 256
Score = 34.3 bits (75), Expect = 0.089
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEF-ATRSIEVDGKTI 236
+ +VL+G +GVGKS+LL RF F E T+ + + + +I+ D T+
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATL 177
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 346 SYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFI 507
S++ +W+ ++R +++IMLVGNK+DL R + EE + A+ + FI
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFI 66
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRE-LRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G LLVY + ++ +++ + LR +N+ I+LVGNKSD+ R + EAK AE
Sbjct: 61 GFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYDEREVSVGEAKDLAE 120
Query: 487 ANGLSF 504
A G F
Sbjct: 121 AWGCPF 126
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIE 218
+KVV++G GVGKS+L +F +F + TI + T E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYHTAGTE 46
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 441
L+ +DIA S+ENV RWL EL DH + +LVGNK DLR
Sbjct: 83 LVCFDIAHRASFENVALRWLPEL-DHFSPGVPRVLVGNKKDLR 124
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 DYL-FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
DY+ K+ ++GD VGK++L N F E T VDG +A ++D
Sbjct: 3 DYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFD 61
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GVGKS+ L T N F E T+ +++ +I +DGK +WD
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSS-NIMLDGKAYNVGLWD 59
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 441
L+ +DI S+EN+E +WL EL H + I LVGNK DLR
Sbjct: 81 LVCFDIGSRTSFENIESKWLPELNHHMPETPKI-LVGNKRDLR 122
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHA--DQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
++ YD++ S+ +WL R A D N+ L+ K+DL+ R I T++ K +A +
Sbjct: 66 IVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQRRVISTKQGKDYANS 125
Query: 490 NGLSF 504
L +
Sbjct: 126 KNLEY 130
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+ LL F++++F T+ E IEVDGK ++ +WD
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWD 5983
Score = 34.3 bits (75), Expect = 0.089
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
L+ + I S EN+ E+W E++ H N+ I+LVGNK DLR
Sbjct: 6005 LMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLR 6046
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLR---ELRDHADQ-NILIMLVGNKSDLRHLRSIPTEEAKA 477
G ++VY I + SYE + ++ ++R D I I+LVGNK DLR R + +EA+
Sbjct: 36 GFVVVYSITDYYSYEMARQLVKLVTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEARE 95
Query: 478 FAEANGLS 501
FA G S
Sbjct: 96 FASEYGCS 103
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 441
A++++D+ ++Y+NV W R+L + +NI I+L GNK D++
Sbjct: 108 AIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDIK 149
Score = 34.7 bits (76), Expect = 0.067
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +3
Query: 105 IGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+GD G GK++ + R EF + +T+GVE IK +WD
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWD 87
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
DYL KV+LIGDS VGK+ LL F E ++ T G
Sbjct: 10 DYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
+ LFKV+++GD+ VGK+S + R+ E K TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLV-GNKSDLRHLRSIPTEEAKAFA 483
G LLV+ + S+E + ++ ++ D+ M++ GNKSDL + R++ T E + A
Sbjct: 85 GFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEYERTVSTAEGQELA 143
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
+F+VV++G GVGK+SL+ RF F+ + T+G
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG 141
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+ KVV+IG+ GVGKS+L RF F E T+ + + EV G+ + ++ D
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTD 915
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA-TRSIEVDGKTIKAQIWD 254
D ++K+ L G GVGK+S+ +R + +EF E +S ++ + + K +K +WD
Sbjct: 6 DEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWD 64
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELR----DHADQNILIMLV-GNKSDLRHLRSIPTEEAK 474
GALLVYD+ S+E ++ WL E++ +D N ++ +V NK D R R + E +
Sbjct: 16 GALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRK-RLVEESEGR 74
Query: 475 AFAE 486
+AE
Sbjct: 75 QWAE 78
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
KVVL GD+ VGK+S L T+NE LE T + +EV + +WD
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNE--LEGTPTAFANYEL-GLEVGSQKFLLDLWD 58
Score = 34.7 bits (76), Expect = 0.067
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAF-AEA 489
LL +DI+ ++E +E +WL E +I + L+GNK+D+R R K +
Sbjct: 80 LLCFDISNRQTFERIESKWLPETTQVLPGSIRV-LIGNKNDIRKTRQDKDRRGKVLKMSS 138
Query: 490 NGLSF-IGRRPWTLPTSSRPSR 552
N + + +G+ +RP+R
Sbjct: 139 NSVIYRVGKPVVPAALMNRPTR 160
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
L++Y I S++ R R L R + +LI L+G K DL HLR I E AE
Sbjct: 3 LILYSIVDRTSFDEASRIARYLKWRKFPETGVLI-LIGTKRDLGHLREIDETEGSELAE 60
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 34.7 bits (76), Expect = 0.067
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
E D KVV +GD VGK+S L T + F ++I + ++++E+DGK + D
Sbjct: 5 ELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCD 63
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLR 441
LL +DIA S+ N+E WL + + ++ +LVGNK +LR
Sbjct: 85 LLCFDIANRESFANIESTWLPHV-NLETSDVPKVLVGNKMELR 126
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 34.3 bits (75), Expect = 0.089
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G +++Y I S+ ++ ++ R +I I+LVGNK DL R + T+E + A
Sbjct: 11 GFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQEGQELA 69
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEF 164
+F++ ++G GVGKSS+ R+ +NEF
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEF 2623
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 227
+K+ ++G GVGK+SLL F ++F+ + T+ ++ S+ +DG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDG 57
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++D
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFD 57
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 66 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 197
RE++ + KVV++G+ VGKSS++ + L T G E
Sbjct: 2 REEDVEVAIKVVVVGNGAVGKSSMIQSANGEDIRLMLWDTAGQE 45
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 84 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
Y +++LIG GK+SL F+ + +ST G+E EVD + ++
Sbjct: 360 YRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-----DGKTIKAQIWD 254
++ ++GDSGVGK+SL+ E + TIG + + GKT + WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWD 66
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSR--FTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
++V++GDS VGK+ LL + + N + + +I + +I VDGK K ++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLELCD 74
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSR 146
+KVVL+GD+GVGKS ++ R
Sbjct: 14 YKVVLVGDAGVGKSFVIDR 32
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
+VV++G GVGKS+L R F E ST+G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 31.1 bits (67), Expect = 0.83
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELR 384
GALLVYD+ S+E ++ WL E++
Sbjct: 11 GALLVYDVTSRESFEALDIWLDEIK 35
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 31.1 bits (67), Expect = 0.83
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +3
Query: 30 RLQSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATR 209
RL+ + +MG+ D FK+ ++G S VGK+SL+ + F E TI ++
Sbjct: 170 RLKMTSNIQMGSGLPPVD--FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIH 226
Query: 210 SIEVDG 227
++ DG
Sbjct: 227 ALNQDG 232
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
+ +V++G +GVGK++L+ RF F E T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 84 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
Y +++LIG GK+SL F+ ST G+E + EVD +K
Sbjct: 358 YRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK 409
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/52 (21%), Positives = 30/52 (57%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQ 245
F ++++G+SG+GKS+L+ + + K E ++++++ T++ +
Sbjct: 25 FTLMVVGESGLGKSTLIDSLFLTDLYSDRKILSAEERIKKTVKIETSTVEIE 76
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+ ++GD+ GK+SLL+ +++ +E + T+ E + ++ +WD
Sbjct: 62 YKLSVVGDAESGKTSLLNALVKSD--IEVEETVIFEECVTDVTSGDSNLEFMLWD 114
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/18 (55%), Positives = 18/18 (100%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSR 146
K+VL+GD+G+GKS+L+++
Sbjct: 7 KLVLVGDAGIGKSTLIAK 24
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++ YDI K S + + L A+ N L+++VG K DL T++ + EA
Sbjct: 299 AIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCKKDL------VTDDTREITEAA 352
Query: 493 GL 498
G+
Sbjct: 353 GM 354
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
F V+++G+SG+GKS+LL+ + S E +++EV T++
Sbjct: 25 FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSIKEKLNKTVEVKPCTVE 74
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 215
+G R Y + ++G+ VGKSSL+ F F E TI EF ++ +
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHL 68
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEF 164
K V++GD GVGK+SLL + + F
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGF 43
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTE 465
++ + + S+ NV +W+ E+R+ + +I LVG SDL+ I TE
Sbjct: 94 IVCFSVVSPTSFANVASKWIPEIREFQPKAPII-LVGTHSDLKDCYKILTE 143
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 84 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 224
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 289 YRGRIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 84 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD 224
Y +++LIG GK+SL F+ ST G+E + EVD
Sbjct: 80 YRGRIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 415 LVGNKSDLRHLRSIPTEEAKAFAEANGLSF 504
L+GNK+DL R + EA+A A+ GL +
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKY 31
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 399 LVGVVAQLAQPPLHVLVRQVLGDVVNQQRAHAPR 298
LV +V + PPL + R V+ +V+ HAPR
Sbjct: 2359 LVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPR 2392
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFN 167
KVVL+G GK+SL+ R+ + FN
Sbjct: 29 KVVLLGKEYSGKTSLVERYLHHRFN 53
>SB_40957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +2
Query: 305 AWARCWFTTSPSTCRTRTWSGGCASCATTPTRTSSSCWS--ATRAIS 439
A+ R W T S C TRT S S + TRT SS W TR +S
Sbjct: 259 AYLRTWCTVSSCNCSTRTLS----SWGNSSTRTLSS-WGDRGTRTLS 300
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEF--NLESKSTIGVEFATRSIEVDGKTIK 239
K+VL+G+SG GK+S E + T+GV +E DG ++
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDGLEVQ 312
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,751,483
Number of Sequences: 59808
Number of extensions: 415336
Number of successful extensions: 1779
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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