Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060797.seq
(657 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 63 6e-12
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 32 0.014
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 27 0.52
AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical prote... 27 0.69
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 26 0.91
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 26 0.91
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 26 0.91
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 26 1.2
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 26 1.2
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 3.7
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 4.9
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 4.9
AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase... 24 4.9
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 6.4
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 63.3 bits (147), Expect = 6e-12
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D T+K +IWD
Sbjct: 25 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWD 79
Score = 59.7 bits (138), Expect = 8e-11
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYDI S+ + W++EL+ A NI+I L GNK+DL + R + EEAK +A+ N
Sbjct: 100 AIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSRVVDYEEAKQYADDN 159
Query: 493 GLSFI 507
L F+
Sbjct: 160 RLLFM 164
Score = 32.7 bits (71), Expect = 0.010
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWARCW---FTTSPSTCRTRTW 361
AGQERY ++ YYRGA A S S R +TW
Sbjct: 81 AGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTW 118
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 32.3 bits (70), Expect = 0.014
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ +L +T + F E T ++ + VDG + +WD
Sbjct: 8 KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWD 60
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.1 bits (57), Expect = 0.52
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 335 PSTCRTRTWSGGCASCATTPTRTSSSCWS 421
P+T T W+ A+ TTP T+++ WS
Sbjct: 181 PTTTTTTVWTDSTAT-TTTPASTTTTTWS 208
>AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical protein
protein.
Length = 226
Score = 26.6 bits (56), Expect = 0.69
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 542 RLDVGRVQGRRPIKLSPLASANAFASS 462
R+D G +GR + PL +AN FA+S
Sbjct: 199 RVDKGERKGRLHTRTQPLIAANLFATS 225
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 26.2 bits (55), Expect = 0.91
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 238 FMVLPSTSILLVANSTPMVDLDSKLNSFLVKRDRRLL 128
F +L +L++ + P+V D LN F + D L
Sbjct: 493 FHLLAGQPLLIIGTTGPLVLFDEALNQFCISNDFNFL 529
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 26.2 bits (55), Expect = 0.91
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 335 PSTCRTRTWSGGCASCATTPTRTSSSCWS 421
P+T T W+ A+ TTP T+++ WS
Sbjct: 180 PTTTTTTVWTDPTAT-TTTPASTTTTTWS 207
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 26.2 bits (55), Expect = 0.91
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 335 PSTCRTRTWSGGCASCATTPTRTSSSCWS 421
P+T T W+ A+ TTP T+++ WS
Sbjct: 180 PTTTTTTVWTDPTAT-TTTPASTTTTTWS 207
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 335 PSTCRTRTWSGGCASCATTPTRTSSSCWS 421
P+T T W+ A+ TTP T+++ WS
Sbjct: 181 PTTTTTTVWTDPTAT-TTTPAPTTTTTWS 208
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 25.8 bits (54), Expect = 1.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 335 PSTCRTRTWSGGCASCATTPTRTSSSCWS 421
P+T T W+ A+ TTP T+++ WS
Sbjct: 181 PTTTTTTVWTDPTAT-TTTPAPTTTTTWS 208
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 24.2 bits (50), Expect = 3.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 522 PGPTSDKTKSVGFRERFRLLRRDGPKMPEI 433
P + TK + F++RF + D +MPE+
Sbjct: 131 PSFDGEITKWLTFKDRFSSMVHDSTEMPEV 160
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 23.8 bits (49), Expect = 4.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 251 GPAGQERYRAITSAYYRGAWARCWFTT 331
GP ++ Y+ +T +Y W +TT
Sbjct: 325 GPFVEDFYQCVTHGFYTDRWQEQLYTT 351
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 23.8 bits (49), Expect = 4.9
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +2
Query: 251 GPAGQERYRAITSAYYRGAWARCWFTT 331
GP ++ Y+ +T +Y W +TT
Sbjct: 326 GPFVEDFYQCVTHGFYTDRWQEQLYTT 352
>AF004915-1|AAB94671.1| 688|Anopheles gambiae pro-phenol oxidase
subunit 1 protein.
Length = 688
Score = 23.8 bits (49), Expect = 4.9
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 343 LSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSI 456
+S ++ERW + + DQ ++ GN+ L R I
Sbjct: 304 VSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGI 341
Score = 23.0 bits (47), Expect = 8.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 191 CGIRNKKYRGRR 226
CG+R+KKY RR
Sbjct: 633 CGLRDKKYPDRR 644
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.4 bits (48), Expect = 6.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 244 RYGTGRPGAVPRHHVGVLPRRVGA 315
+ G G+P A PR LPRR A
Sbjct: 191 KVGGGQPSASPRQPPTPLPRRSSA 214
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,072
Number of Sequences: 2352
Number of extensions: 13160
Number of successful extensions: 38
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -