Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060797.seq
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 130 1e-30
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 128 5e-30
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 101 4e-22
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 86 2e-17
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 86 2e-17
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 82 3e-16
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 82 3e-16
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 82 3e-16
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 81 9e-16
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 79 4e-15
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 79 4e-15
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 78 6e-15
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 78 6e-15
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 75 3e-14
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 75 3e-14
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 74 8e-14
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 74 8e-14
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 74 8e-14
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 72 3e-13
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 69 4e-12
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 68 5e-12
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 68 7e-12
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 63 1e-10
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 63 1e-10
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 62 3e-10
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 62 3e-10
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 62 3e-10
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 62 4e-10
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 62 4e-10
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 62 4e-10
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 62 4e-10
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 62 4e-10
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 62 4e-10
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 62 4e-10
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 60 1e-09
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 56 2e-08
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 56 3e-08
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 54 7e-08
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 54 7e-08
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 54 9e-08
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 54 9e-08
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 52 4e-07
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 52 5e-07
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 51 8e-07
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 48 6e-06
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 48 8e-06
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 42 4e-04
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 41 9e-04
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 40 0.001
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 40 0.001
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 40 0.002
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.002
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.002
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 40 0.002
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 40 0.002
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 40 0.002
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 40 0.002
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 39 0.003
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 39 0.003
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 39 0.003
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 37 0.011
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 37 0.011
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 37 0.014
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 37 0.014
AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical ... 37 0.014
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 37 0.014
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 36 0.025
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 36 0.025
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 36 0.025
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.025
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 36 0.033
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 35 0.058
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 35 0.058
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 35 0.058
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 34 0.077
Z73422-14|CAD37351.1| 441|Caenorhabditis elegans Hypothetical p... 33 0.13
Z73422-13|CAA97773.2| 443|Caenorhabditis elegans Hypothetical p... 33 0.13
Z70307-16|CAC42262.2| 441|Caenorhabditis elegans Hypothetical p... 33 0.13
Z70307-15|CAA94342.2| 443|Caenorhabditis elegans Hypothetical p... 33 0.13
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 33 0.18
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 33 0.18
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 33 0.24
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 32 0.31
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 31 0.95
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 30 1.3
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 29 2.2
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 29 2.2
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 29 2.2
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 29 3.8
U64848-10|AAB04888.1| 168|Caenorhabditis elegans Hypothetical p... 28 5.1
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 28 6.7
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 130 bits (313), Expect = 1e-30
Identities = 60/66 (90%), Positives = 65/66 (98%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 236
MG+R+DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEFNLESKSTIGVEFATRSI V+GKT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTV 60
Query: 237 KAQIWD 254
KAQIWD
Sbjct: 61 KAQIWD 66
Score = 124 bits (299), Expect = 6e-29
Identities = 56/67 (83%), Positives = 64/67 (95%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDIAKH++YENVERWL+ELRDHADQNI+IMLVGNKSDLRHLR++PT+EAK +AE
Sbjct: 85 VGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMLVGNKSDLRHLRAVPTDEAKIYAE 144
Query: 487 ANGLSFI 507
N LSFI
Sbjct: 145 RNQLSFI 151
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 68 AGQERYRAITSAYYRGA 84
Score = 33.9 bits (74), Expect = 0.10
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNIL 560
F TSALDSTNVE AF NIL
Sbjct: 150 FIETSALDSTNVEAAFTNIL 169
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 128 bits (308), Expect = 5e-30
Identities = 59/66 (89%), Positives = 65/66 (98%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 236
MG+R+DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI V+GKT+
Sbjct: 1 MGSRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTV 60
Query: 237 KAQIWD 254
KAQIWD
Sbjct: 61 KAQIWD 66
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSD 435
VGALLVYDIAKH++YENVERWL+ELRDHADQNI+IM VGNK D
Sbjct: 85 VGALLVYDIAKHVTYENVERWLKELRDHADQNIVIMPVGNKCD 127
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 68 AGQERYRAITSAYYRGA 84
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 101 bits (242), Expect = 4e-22
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +3
Query: 72 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 251
+EY YLFK+VLIG+ GVGKS+LLSRFTRNEFNL+SK TIGVEFAT+ I V+GK +K QIW
Sbjct: 3 NEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIW 62
Query: 252 D 254
D
Sbjct: 63 D 63
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/67 (64%), Positives = 58/67 (86%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GALLVYDI+KH +YE+VE+WL+ LRDHA+++I+I LVGNKSDL H ++PT+EAK +AE
Sbjct: 82 LGALLVYDISKHKTYESVEQWLKVLRDHANEDIVITLVGNKSDLSH--AVPTDEAKIYAE 139
Query: 487 ANGLSFI 507
N +SFI
Sbjct: 140 RNHISFI 146
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNIL 560
F TSALD+TNVE AF NI+
Sbjct: 145 FIETSALDNTNVEAAFTNIV 164
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AG ER+R S+YYRGA
Sbjct: 65 AGMERFRCGASSYYRGA 81
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 236
M EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+IE+DGKTI
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 237 KAQIWD 254
K QIWD
Sbjct: 61 KLQIWD 66
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 86.2 bits (204), Expect = 2e-17
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = +3
Query: 57 MGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTI 236
M EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+IE+DGKTI
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 237 KAQIWD 254
K QIWD
Sbjct: 61 KLQIWD 66
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/66 (37%), Positives = 44/66 (66%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYDI ++ NV++WL+E+ +A +N+ +LVGNK DL R++ T+ A+ +A
Sbjct: 86 GIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDLTAKRAVETQAAQDYAGQ 145
Query: 490 NGLSFI 507
G+ F+
Sbjct: 146 LGIPFL 151
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 68 AGQERFRTITSSYYRGA 84
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/59 (62%), Positives = 47/59 (79%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+IE+DGK IK QIWD
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Score = 48.4 bits (110), Expect = 4e-06
Identities = 17/41 (41%), Positives = 29/41 (70%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 429
+G +LVYDI S+EN++ W+R + +HA ++ M++GNK
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 65 AGQERFRTITTAYYRGA 81
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/59 (62%), Positives = 47/59 (79%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+IE+DGK IK QIWD
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Score = 58.0 bits (134), Expect = 5e-09
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +LVYDI S+EN++ W+R + +HA ++ M++GNK D+ R + + + A
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAI 141
Query: 487 ANGLSFI 507
G F+
Sbjct: 142 EYGTKFL 148
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 65 AGQERFRTITTAYYRGA 81
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/59 (62%), Positives = 47/59 (79%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+IE+DGK IK QIWD
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWD 63
Score = 58.0 bits (134), Expect = 5e-09
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +LVYDI S+EN++ W+R + +HA ++ M++GNK D+ R + + + A
Sbjct: 82 MGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNKCDIEERREVSRDRGEQLAI 141
Query: 487 ANGLSFI 507
G F+
Sbjct: 142 EYGTKFL 148
Score = 34.7 bits (76), Expect = 0.058
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 65 AGQERFRTITTAYYRGA 81
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 80.6 bits (190), Expect = 9e-16
Identities = 35/67 (52%), Positives = 51/67 (76%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GALLVYDI S+ ++E+WL +LR H ++IML+GNKSDL+ +R + TEE +AFA+
Sbjct: 80 LGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDLKAVRDVTTEEGEAFAK 139
Query: 487 ANGLSFI 507
NGL+F+
Sbjct: 140 KNGLTFM 146
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 41/58 (70%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
D++FK V+IGD GVGKS+LL RFT F+ +T+GVEF + +++D ++ ++WD
Sbjct: 4 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWD 61
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
GTR+ YD+LFK+++IGDSGVGKSSLL RF N F+ +TIGV+F R+++++G+ +K
Sbjct: 3 GTRD--YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
Query: 240 AQIWD 254
QIWD
Sbjct: 61 LQIWD 65
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/65 (55%), Positives = 51/65 (78%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
GTR+ YD+LFK+++IGDSGVGKSSLL RF N F+ +TIGV+F R+++++G+ +K
Sbjct: 3 GTRD--YDHLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
Query: 240 AQIWD 254
QIWD
Sbjct: 61 LQIWD 65
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/65 (33%), Positives = 42/65 (64%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYD+ S+ NV+RWL+E+ ++ D ++ +LVGNK + R + +A+ +A++
Sbjct: 85 GVVVVYDVTNGESFGNVKRWLQEIENNCD-SVQKVLVGNKCEENERRVVLESDARNYAQS 143
Query: 490 NGLSF 504
+SF
Sbjct: 144 MNISF 148
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 257 AGQERYRAITSAYYRG 304
AGQER+R ITS YYRG
Sbjct: 67 AGQERFRTITSTYYRG 82
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 77.8 bits (183), Expect = 6e-15
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWD
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GAL+VYDI + +Y ++ WL + + + N I L+GNK+DL R +P EEAKAFAE
Sbjct: 86 GALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKADLEDQRDVPYEEAKAFAEE 145
Query: 490 NGLSFI 507
NGL+F+
Sbjct: 146 NGLTFL 151
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RA+T +YYRGA
Sbjct: 68 AGQERFRAVTRSYYRGA 84
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 77.8 bits (183), Expect = 6e-15
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y Y+FK ++IGD GVGKS LL +FT +F + TIGVEF TR IEV G+ IK QIWD
Sbjct: 8 YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F ++IE+ GK IK QIWD
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/66 (36%), Positives = 44/66 (66%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +LVYDI S++N+ +WLR + +HA ++++ M++GNK D+ R + E + A+
Sbjct: 83 MGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNKCDMSDRRVVSRERGEKIAQ 142
Query: 487 ANGLSF 504
+G+SF
Sbjct: 143 DHGISF 148
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+ IT++YYRGA
Sbjct: 66 AGQERFHTITTSYYRGA 82
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F ++IE+ GK IK QIWD
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Score = 48.8 bits (111), Expect = 3e-06
Identities = 17/41 (41%), Positives = 31/41 (75%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNK 429
+G +LVYDI S++N+ +WLR + +HA ++++ M++GNK
Sbjct: 83 MGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILGNK 123
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+ IT++YYRGA
Sbjct: 66 AGQERFHTITTSYYRGA 82
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DGK IK QIWD
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 61
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GALLVYDI + ++ ++ WL + R H++ N++IML+GNKSDL R + EE +AFA
Sbjct: 81 GALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKSDLEARREVKREEGEAFARE 140
Query: 490 NGLSFI 507
+GL F+
Sbjct: 141 HGLVFM 146
Score = 30.7 bits (66), Expect = 0.95
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQE +R+IT +YYRGA
Sbjct: 63 AGQESFRSITRSYYRGA 79
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+D +DYLFK+VL+GD GVGK+ ++ RF F +TIGV+F +++ VDGK +K QI
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQI 63
Query: 249 WD 254
WD
Sbjct: 64 WD 65
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+D +DYLFK+VL+GD GVGK+ ++ RF F +TIGV+F +++ VDGK +K QI
Sbjct: 4 DDGFDYLFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQI 63
Query: 249 WD 254
WD
Sbjct: 64 WD 65
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G +L YDI S+ +++RW+ ++ A N++ +L+G K DL R+I EEA+ A
Sbjct: 85 GIVLCYDITCKQSFGSLQRWIDDVSKFAAPNVVKLLIGTKCDLEDQRAIEAEEAEMLQRA 144
Query: 490 NGL 498
NG+
Sbjct: 145 NGM 147
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 260 GQERYRAITSAYYRGA 307
GQER+R IT +YYR A
Sbjct: 68 GQERFRTITQSYYRSA 83
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DGK IK Q+WD
Sbjct: 3 YAYLFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWD 61
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 68.5 bits (160), Expect = 4e-12
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL++++ F+ + K+TIG +F TR + +D +T+ QIWD
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWD 64
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
D++FK V+IGD GVGKS+LL RF F+ ST+G+EF R++E+D K +K +WD
Sbjct: 4 DHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWD 61
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GALLVYDI S+ ++E WL +L+ D +I+I+L+GNKSDL R + EE +AFA
Sbjct: 80 IGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKSDLEADREVRKEEGEAFAR 139
Query: 487 ANGLSFI 507
GL F+
Sbjct: 140 EFGLIFM 146
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/61 (47%), Positives = 44/61 (72%)
Frame = +3
Query: 72 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 251
++Y YLFKVVL+G++GVGK+ L+ +FT+ F +TIGV+F ++++V IK QIW
Sbjct: 2 EDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIW 61
Query: 252 D 254
D
Sbjct: 62 D 62
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANG 495
+LVYD++ S++ + WL E+ +A++ +L +LVGNK D R +P + F++ N
Sbjct: 84 VLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREVPERIGRDFSDVNQ 143
Query: 496 LSF 504
+
Sbjct: 144 FDY 146
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWA 313
AGQER+R+IT +YYR A A
Sbjct: 64 AGQERFRSITQSYYRSAHA 82
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNILNRDLQD 578
F TSALD+TNV+ F+ + R D
Sbjct: 147 FLETSALDATNVDQLFEQVATRLTND 172
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+VL+G+S VGKSSL+ RF + +F+ +STIG F T+++ +D TIK +IWD
Sbjct: 20 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWD 74
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYDI S++ + W++EL+ A NI++ L GNK+D+ + R++ EEA A+AE N
Sbjct: 95 AIVVYDITNQESFQKAKNWVKELQRQASPNIVMALAGNKADVANKRTVEYEEANAYAEDN 154
Query: 493 GLSFI 507
L F+
Sbjct: 155 ALLFM 159
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWA 313
AGQERY ++ YYRGA A
Sbjct: 76 AGQERYHSLAPMYYRGAQA 94
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+++IG+SGVGKSSL+ RF + F+ E +TIGV+F S+ +DG +K IWD
Sbjct: 13 KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWD 66
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDH-ADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G + VYD+ S+E + W++E+ + + NI+ M+V NK D+ + R + EE FA+
Sbjct: 86 GVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPN-RVVTREEGLKFAK 144
Query: 487 ANGLSFI 507
+ FI
Sbjct: 145 RHRTLFI 151
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R +T +YYRGA
Sbjct: 68 AGQERFRTLTPSYYRGA 84
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IK 239
T D+ Y KV++IGD GVGK+S++ RF N F+ K+TIGV+FA + + VD T +
Sbjct: 5 TNNDKISY--KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVH 62
Query: 240 AQIWD 254
QIWD
Sbjct: 63 LQIWD 67
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y++LFK+V++GD GKS +L RF N F ++ ST+GV+F ++I++ I+ ++WD
Sbjct: 3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWD 61
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVER-WLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G + VYD+ S+EN+E+ WL+E++ HA N ++MLVGNK+D+ R + + A+ A
Sbjct: 81 GVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDFDRAEKLAS 140
Query: 487 ANGLS 501
G+S
Sbjct: 141 RLGVS 145
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT-IK 239
T D+ Y KV++IGD GVGK+S++ RF N F+ K+TIGV+FA + + VD T +
Sbjct: 5 TNNDKISY--KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVH 62
Query: 240 AQIWD 254
QIWD
Sbjct: 63 LQIWD 67
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K +K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 240 AQIWD 254
QIWD
Sbjct: 73 LQIWD 77
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/66 (30%), Positives = 39/66 (59%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 487 ANGLSF 504
GL F
Sbjct: 156 QLGLEF 161
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYR IT+AYYRGA
Sbjct: 79 AGQERYRTITTAYYRGA 95
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K +K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 240 AQIWD 254
QIWD
Sbjct: 73 LQIWD 77
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/66 (30%), Positives = 39/66 (59%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 487 ANGLSF 504
GL F
Sbjct: 156 QLGLEF 161
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYR IT+AYYRGA
Sbjct: 79 AGQERYRTITTAYYRGA 95
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K +K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 240 AQIWD 254
QIWD
Sbjct: 73 LQIWD 77
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/66 (30%), Positives = 39/66 (59%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 487 ANGLSF 504
GL F
Sbjct: 156 QLGLEF 161
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYR IT+AYYRGA
Sbjct: 79 AGQERYRTITTAYYRGA 95
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K +K
Sbjct: 27 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 86
Query: 240 AQIWD 254
QIWD
Sbjct: 87 LQIWD 91
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/66 (30%), Positives = 39/66 (59%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 110 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 169
Query: 487 ANGLSF 504
GL F
Sbjct: 170 QLGLEF 175
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYR IT+AYYRGA
Sbjct: 93 AGQERYRTITTAYYRGA 109
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANG 495
LLVYDIA S+EN WL +++++ + + + LVGNK DL R++PT+E K AEA
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEAYQ 137
Query: 496 LSFI 507
+ F+
Sbjct: 138 IPFM 141
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEF-NLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
KV+L+GDS GK+ LL R+ F N ST+G+++ + I + K +K QIWD
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWD 58
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R++T++YYR A
Sbjct: 60 AGQERFRSVTTSYYRDA 76
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANG 495
LLVYDIA S+EN WL +++++ + + + LVGNK DL R++PT+E K AEA
Sbjct: 80 LLVYDIANRASFENCRNWLSQIKEYGKEAVQVTLVGNKCDLP--RAVPTDEGKRLAEAYQ 137
Query: 496 LSFI 507
+ F+
Sbjct: 138 IPFM 141
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEF-NLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
KV+L+GDS GK+ LL R+ F N ST+G+++ + I + K +K QIWD
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWD 58
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R++T++YYR A
Sbjct: 60 AGQERFRSVTTSYYRDA 76
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + +DY+FK+++IG+S VGK+S L R+ + F ST+G++F +++ K +K
Sbjct: 13 GQPDQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVK 72
Query: 240 AQIWD 254
QIWD
Sbjct: 73 LQIWD 77
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/66 (30%), Positives = 39/66 (59%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+G +L+YDI S+ +V+ W +++ ++ +N ++LVGNK D+ R + + + A+
Sbjct: 96 MGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLAD 155
Query: 487 ANGLSF 504
GL F
Sbjct: 156 QLGLEF 161
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYR IT+AYYRGA
Sbjct: 79 AGQERYRTITTAYYRGA 95
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/55 (41%), Positives = 38/55 (69%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
F++V+ GD+ VGKSS + R R +F + ST+GV+F +++ VDG+ + Q+WD
Sbjct: 462 FRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWD 516
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +1
Query: 301 RRVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLR--SIPTEEAK 474
R GA+LVYD+ S+ V W+ +++ +++I I+LVGNK D+R S+ +
Sbjct: 533 RADGAILVYDVCAEQSFLRVRDWIETIKESTERSIPIILVGNKVDMRISTPGSVAKTDGA 592
Query: 475 AFAEANGLSFI 507
+ A A G+ F+
Sbjct: 593 SMAAAMGVLFM 603
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 56.4 bits (130), Expect = 2e-08
Identities = 20/55 (36%), Positives = 42/55 (76%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V +G+ VGK+SL++RF + F+ ++TIG++F ++++ ++ +T++ Q+WD
Sbjct: 11 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 65
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYDI S+ +W+ ++R +++IMLVGNK+DL R + T+E + A+
Sbjct: 86 AVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKEL 145
Query: 493 GLSFI 507
+ FI
Sbjct: 146 NVMFI 150
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWD 254
+ Y +++++IGDS VGKSSLL FT + S T+GV+F R IE+ G +K Q+WD
Sbjct: 14 FHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWD 73
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRE----LRDHADQNILIMLVGNKSDLRHLRSIPTEEAK 474
VG L +YD S+E+VE W++E L + + LVG KSD+ R + EE +
Sbjct: 92 VGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPSKCVFQLVGTKSDMDSQRQVNYEEGE 151
Query: 475 AFAEANGLSFI 507
FA+ + + FI
Sbjct: 152 YFAKYHKMKFI 162
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQE++R+IT +YYR +
Sbjct: 75 AGQEKFRSITKSYYRNS 91
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 56.0 bits (129), Expect = 2e-08
Identities = 20/55 (36%), Positives = 42/55 (76%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V +G+ VGK+S+++RF + F+ ++TIG++F ++++ ++ +TI+ Q+WD
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWD 66
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYDI S+ +W+ ++R+ +++I+LVGNK+DL R + TE+ + A
Sbjct: 87 AVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDL 146
Query: 493 GLSFI 507
+ FI
Sbjct: 147 NVMFI 151
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 242
T D+ + FK+VL+G+ VGKSSL+ RF N+F+ + STI F +++ V+
Sbjct: 4 TNVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADL 63
Query: 243 QIWD 254
IWD
Sbjct: 64 HIWD 67
Score = 55.2 bits (127), Expect = 4e-08
Identities = 24/66 (36%), Positives = 40/66 (60%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G LLV+DI S+E V+ W+ E++ I++VGNK DL R + ++A+A+AE+
Sbjct: 87 GVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILIVGNKIDLEEERQVTRQDAEAYAES 146
Query: 490 NGLSFI 507
G ++
Sbjct: 147 EGALYM 152
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWD 254
D +FKVV +GDS VGK+ L RF N F +TIGV+F +++++ + I Q+WD
Sbjct: 200 DRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWD 258
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 438
G +L++D+ S+ NV W+ +R D ++ LVGNK DL
Sbjct: 278 GVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCLVGNKMDL 320
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R+IT Y+R A
Sbjct: 260 AGQERFRSITKQYFRKA 276
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/55 (41%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWD 254
KVV++G+SG GK++LL+ F N F + +TIG++F + +++ DG++I+ Q+WD
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWD 62
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 54.4 bits (125), Expect = 7e-08
Identities = 19/55 (34%), Positives = 42/55 (76%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
F++V +G+ VGK+SL++RF + F+ ++TIG++F ++++ ++ +T++ Q+WD
Sbjct: 11 FELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWD 65
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 54.4 bits (125), Expect = 7e-08
Identities = 20/54 (37%), Positives = 41/54 (75%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 251
FK+V +G+ VGK+S+++RF + F+ ++TIG++F ++++ ++ +TI+ QIW
Sbjct: 12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 215
+YDYL K + +GDSGVGK+S L R+T N F + ST+G++F + +
Sbjct: 3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKV 49
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
+G +L++DI S+ N+ WL +L+ HA + I++ GNK+DL + R + T AK A
Sbjct: 90 MGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLA 149
Query: 484 EANGLSF 504
+ GL +
Sbjct: 150 DQLGLPY 156
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R++T+A++R A
Sbjct: 73 AGQERFRSLTTAFFRDA 89
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 54.0 bits (124), Expect = 9e-08
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 215
+YDYL K + +GDSGVGK+S L R+T N F + ST+G++F + +
Sbjct: 3 DYDYLIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKV 49
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
+G +L++DI S+ N+ WL +L+ HA + I++ GNK+DL + R + T AK A
Sbjct: 90 MGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPDIIICGNKADLENRRQVSTARAKQLA 149
Query: 484 EANGLSF 504
+ GL +
Sbjct: 150 DQLGLPY 156
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R++T+A++R A
Sbjct: 73 AGQERFRSLTTAFFRDA 89
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/55 (38%), Positives = 37/55 (67%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FKV+++G++ VGK+ L RF F +++TIGV+F RS ++ + ++ Q+WD
Sbjct: 101 FKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWD 155
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 301 RRVGALL-VYDIAKHLSYENVERWLRELRDHA---DQNILIMLVGNKSDLRHLRSIPTEE 468
R V A++ VYD+ S+ ++ W++E H D + +L+GNK D+ + T+E
Sbjct: 172 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNKCDVECTNRVSTDE 231
Query: 469 AKAFAEANGLS 501
A+ FA+ N ++
Sbjct: 232 AQMFADRNNMA 242
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = +3
Query: 72 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV 221
++Y YLFKVVL+ ++GVGK+ L+ +FT+ F +TIGV+F ++++V
Sbjct: 2 EDYKYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVD---------G 227
+YDYL K + GD GVGK+S L R+T N F + ST+G++F + + + G
Sbjct: 3 DYDYLIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVVYESSRGGFGGRG 62
Query: 228 KTIKAQIWD 254
+ + QIWD
Sbjct: 63 QRVLLQIWD 71
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
AL+VYD+ ++E+VE+WL++L R ++ + L+GNK+DL R + E KA A
Sbjct: 132 ALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDANVYLIGNKTDLVEKREVTEAEGKAMA 189
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK----TIKAQIWD 254
KVV++GDSGVGK+S++ R +TIG F + + D + ++ Q+WD
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWD 111
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 9/62 (14%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSS---------LLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
L KV+++GDSGVGK+S L++++ F + K+TIG +F TR + +D +T+
Sbjct: 9 LLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDRTVT 68
Query: 240 AQ 245
Q
Sbjct: 69 LQ 70
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK-TIKAQ 245
+D D + K+V++GD GK+S+ RF + F+ T+G++F +R I + + + Q
Sbjct: 29 DDPDDKVIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHEMQVLVQ 88
Query: 246 IWD 254
+WD
Sbjct: 89 VWD 91
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +1
Query: 319 LVYDIAKHLSYENVERWLRELRDHADQN---ILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
LVYD+ S+EN WL ++ + + + ++L+GNK+DL R + E K FA +
Sbjct: 114 LVYDVTNSKSFENAVDWLSVVKKNTKSSETPVKLVLMGNKTDLEERRVVSVEAHKNFATS 173
Query: 490 NGL 498
N +
Sbjct: 174 NDM 176
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+VL+GD G GK++ + R EF + +T+GVE + I+ +WD
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWD 64
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 441
A++++D+ ++Y+NV W R+L +NI I+L GNK D++
Sbjct: 85 AIIMFDVTARVTYKNVPNWHRDLA-RVCENIPIVLCGNKVDVK 126
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G +LV+ +A+ ++EN+++ ++ + + ++LVGNKSDL R + EA FAE
Sbjct: 77 GFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDLAETRQVDESEAHNFAE 135
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V++G+ GVGKS+L ++ + F +TI + S +VD + + +I D
Sbjct: 4 YKIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLS-KVDAENARLEILD 57
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++T ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYST-NVMVDGRPINLSLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++T ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYST-NVMVDGRPINLSLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FKVV++G GVGKS+L +F + F + TI +F + IEVDG+ +I D
Sbjct: 4 FKVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI-EDFYRKEIEVDGQPSVLEILD 57
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+ LL F++++F T+ E IEVDGK ++ +WD
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV-FENYVADIEVDGKQVELALWD 59
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
L+ + I S EN+ E+W E+R H N+ I+LVGNK DLR
Sbjct: 81 LMCFSIDSPDSLENIPEKWTPEVR-HFCPNVPIILVGNKRDLR 122
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD GK+ LL F++++F T+ E IEVDGK ++ +WD
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTV-FENYVADIEVDGKQVELALWD 59
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
L+ + I S EN+ E+W E+R H N+ I+LVGNK DLR
Sbjct: 81 LMCFSIDSPDSLENIPEKWTPEVR-HFCPNVPIILVGNKRDLR 122
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWD 57
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVE-RWLRELRDHADQNILIMLVGNKSDLRHLR 450
L+ + + S+ENV +W E+ H N I+LVG K+DLR R
Sbjct: 79 LVCFALNNPASFENVRAKWYPEVSHHCP-NTPIILVGTKADLREDR 123
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N F E T+ ++ ++ VDG+ I +WD
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSA-NVMVDGRPINLGLWD 57
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGK----TIKAQIWD 254
KVV++GDSGVGK+S++ R +TIG F + + D + ++ Q+WD
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWD 111
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V++GD GVGKS+L + +N F E TI + + + +DG+T I D
Sbjct: 4 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSY-RKQVVIDGETCLLDILD 57
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G LLV+ + + S+ENV + ++R D ++ ++LVGNK DL RS+ A+
Sbjct: 77 GFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSS-RSVDFRTVSETAK 135
Query: 487 ANGL 498
G+
Sbjct: 136 GYGI 139
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V++GD GVGKS+L + +N F E TI + + + +DG+T I D
Sbjct: 7 YKLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSY-RKQVVIDGETCLLDILD 60
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G LLV+ + + S+ENV + ++R D ++ ++LVGNK DL RS+ A+
Sbjct: 80 GFLLVFAVNEAKSFENVANYREQIRRVKDSDDVPMVLVGNKCDLSS-RSVDFRTVSETAK 138
Query: 487 ANGL 498
G+
Sbjct: 139 GYGI 142
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3
Query: 144 RFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
RF + F+ E +TIGV+F S+ +DG +K IWD
Sbjct: 3 RFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWD 39
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDH-ADQNILIMLVGNKSDL 438
G + VYD+ S+E + W++E+ + + NI+ M+V NK D+
Sbjct: 59 GVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDM 102
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R +T +YYRGA
Sbjct: 41 AGQERFRTLTPSYYRGA 57
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
G +LVY I S+E ++ R + D +I I++VGNK+DL R + EE + A
Sbjct: 87 GFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGEELAR 146
Query: 487 ANGLSFI 507
F+
Sbjct: 147 QWDAKFV 153
Score = 31.1 bits (67), Expect = 0.72
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTI 188
KV ++G VGKS+L+ RFT+N F +STI
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIFPERYESTI 46
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 242
T ++ + +++V++G + VGK++++ R+ NEF+ + K TI + +R + G +
Sbjct: 9 TEDEMCEERYRLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI-EDLHSREFRIQGVPLPL 67
Query: 243 QIWD 254
I D
Sbjct: 68 DILD 71
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V++G GVGKS+L +F + F + TI + + +EVDG+ +I D
Sbjct: 4 YKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSY-RKQVEVDGQQCMLEILD 57
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V+IGD GVGKSSL +F + +F TI ++ + E+DG + + D
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQY-IQHCEIDGNWVIMDVLD 71
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V+IGD GVGKSSL +F + +F TI ++ + E+DG + + D
Sbjct: 18 YKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQY-IQHCEIDGNWVIMDVLD 71
>AF067623-4|AAC17556.2| 393|Caenorhabditis elegans Hypothetical
protein T26C12.3 protein.
Length = 393
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G +++Y + S+ + + L + N I+LVG+K D+R R + + E + A
Sbjct: 291 GIIIMYSVVDRQSFYHAAEIFKRLEHSREHNQPIVLVGSKKDMRVKRVVTSFEGQQLART 350
Query: 490 NGLSFI 507
G+ F+
Sbjct: 351 LGIPFL 356
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
GT + + KV+++G GVGKS+L +F +EF E + T + + + +DG+
Sbjct: 8 GTLPPQQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSY-RKKVVLDGEECS 66
Query: 240 AQIWD 254
I D
Sbjct: 67 IDILD 71
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELR--DHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G + V+ I S+E + ++ ++D ++ I+LVGNK D+R R + E + A
Sbjct: 91 GFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKGDMRDQRVVSAELCRQRA 150
Query: 484 EANGLSFI 507
E G ++
Sbjct: 151 EQWGCHYV 158
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ +L +T + F ++ T+ ++ + + +DG + +WD
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWD 61
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ +L +T + F ++ T+ ++ + + +DG + +WD
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQ-MSLDGNVVNLGLWD 61
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR 441
A++++D+ ++Y+NV W +L +NI I+L GNK D++
Sbjct: 19 AIIMFDVTARVTYKNVPNWHHDLA-RVCENIPIVLCGNKVDVK 60
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+V++GD+ GK+SLL +T+ +F L++ +T + S+ +D K ++D
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQF-LDNYTTTVFDNWAVSVHIDNKNYAVNLFD 58
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 367 WLRELRDHADQNILIMLVGNKSDL 438
W+ E+R +A N+ IMLVG K+DL
Sbjct: 98 WIPEIRKYAGDNVPIMLVGTKNDL 121
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 99 VLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEF 200
++IG+SGVGKSSL+ RF + + E +IGV F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.058
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + EA+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
Query: 484 EANGLSFI 507
+ ++
Sbjct: 150 HRLSIPYL 157
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.058
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + EA+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
Query: 484 EANGLSFI 507
+ ++
Sbjct: 150 HRLSIPYL 157
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 34.7 bits (76), Expect = 0.058
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + EA+ A
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVARHEAEELA 149
Query: 484 EANGLSFI 507
+ ++
Sbjct: 150 HRLSIPYL 157
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 34.3 bits (75), Expect = 0.077
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDH----ADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
++VYD+ LS++ E L + H + +LVGNK+DL R + E + A
Sbjct: 83 VVVYDVTSQLSFQYAEGILERISRHEHVLCPREHRTLLVGNKTDLERYRQVSETEGERLA 142
Query: 484 EANGLSF 504
+ F
Sbjct: 143 SQHKAQF 149
>Z73422-14|CAD37351.1| 441|Caenorhabditis elegans Hypothetical
protein C39E9.14b protein.
Length = 441
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>Z73422-13|CAA97773.2| 443|Caenorhabditis elegans Hypothetical
protein C39E9.14a protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>Z70307-16|CAC42262.2| 441|Caenorhabditis elegans Hypothetical
protein C39E9.14b protein.
Length = 441
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>Z70307-15|CAA94342.2| 443|Caenorhabditis elegans Hypothetical
protein C39E9.14a protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIG 191
V+++GD+ GKSSLLSR +++ ++ KS +G
Sbjct: 49 VIVLGDNRSGKSSLLSRLDKSDRTVKPKSLLG 80
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++D
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFD 57
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++D
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFD 54
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++D
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAM-IGGEPYTLGLFD 57
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEF 164
+K+ ++GD+G GKSSL+S+ +E+
Sbjct: 238 YKIYVVGDTGTGKSSLISQLITSEY 262
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 30.7 bits (66), Expect = 0.95
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +2
Query: 518 PGLYQRRAGLPE--HSEPRSTGFVSQRQMRD--PPXGERHPARRRSP 646
P RR+ P HS PR F + R+ PP +R PAR RSP
Sbjct: 120 PDALVRRSRSPPRYHSGPREDRFSDRNPPREHSPPPPQRFPARERSP 166
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLREL--RDHADQNILIMLVGNKSDLRHLRSIPTE 465
G L+V+ + S+E V++ L EL R + I+LVGNK+DL + R + E
Sbjct: 91 GFLIVFAVTDRNSFEEVKK-LHELICRIKDRDDFPIILVGNKADLENERHVSFE 143
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFA--TRSIEVDGKTIKAQIWD 254
Y K+V+ GD VGK+ L R F E +T ++ A + +K +WD
Sbjct: 42 YNLKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWD 100
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTI-GVEFATRSIEVDGKTI 236
V L+G SG GKS+++S R L+ K TI GV+ ++E K +
Sbjct: 447 VALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNV 494
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTI-GVEFATRSIEVDGKTI 236
V L+G SG GKS+++S R L+ K TI GV+ ++E K +
Sbjct: 447 VALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNV 494
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +1
Query: 301 RRVGALL-VYDIAKHLSYENVERWLRELRDH---ADQNILIMLVGNK 429
R V A++ VYD+ S+ ++ W++E H D + +L+GNK
Sbjct: 19 RNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSEVPRILIGNK 65
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = +1
Query: 316 LLVYDIAKHLSYEN---VERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+L+Y + S+ + ++E++ +A IMLVGNK D R + + + A
Sbjct: 13 ILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSGQKVAT 72
Query: 487 ANGLSFI 507
FI
Sbjct: 73 NMECGFI 79
>U64848-10|AAB04888.1| 168|Caenorhabditis elegans Hypothetical
protein C50E3.2 protein.
Length = 168
Score = 28.3 bits (60), Expect = 5.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +1
Query: 82 IICSKLYSLEILVWVKAVFCRV 147
+IC KL + ++ +W A+FC +
Sbjct: 71 VICGKLEACQVALWTSAMFCDI 92
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEF 164
++VLIGD G GK+SL+ +E+
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLEDEW 34
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLREL 381
VGA+LV+D+ S EN+ WL L
Sbjct: 91 VGAILVHDLTNKRSEENLATWLTML 115
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
protein H08M01.2b protein.
Length = 1341
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 108 GDSGVGKSSLLSRFTR---NEFNLESKSTI 188
G SGVGKS L +RF R +EF+ E S +
Sbjct: 32 GPSGVGKSLLCNRFVRPAADEFHREHSSVL 61
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
protein H08M01.2a protein.
Length = 1320
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 108 GDSGVGKSSLLSRFTR---NEFNLESKSTI 188
G SGVGKS L +RF R +EF+ E S +
Sbjct: 32 GPSGVGKSLLCNRFVRPAADEFHREHSSVL 61
>Z37093-6|CAJ85783.1| 176|Caenorhabditis elegans Hypothetical
protein ZK669.5b protein.
Length = 176
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRF 149
YD +FK ++ G VGK +LL F
Sbjct: 8 YDRVFKFLIFGGKSVGKKTLLRSF 31
>Z37093-5|CAJ85782.1| 212|Caenorhabditis elegans Hypothetical
protein ZK669.5a protein.
Length = 212
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRF 149
YD +FK ++ G VGK +LL F
Sbjct: 8 YDRVFKFLIFGGKSVGKKTLLRSF 31
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,263,537
Number of Sequences: 27780
Number of extensions: 296524
Number of successful extensions: 1313
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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