Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060797.seq
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putati... 120 1e-27
At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putati... 117 6e-27
At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putati... 116 1e-26
At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putati... 115 2e-26
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 114 4e-26
At4g18800.1 68417.m02776 Ras-related GTP-binding family protein ... 113 7e-26
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 113 7e-26
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 113 1e-25
At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putati... 113 1e-25
At3g15060.1 68416.m01905 Ras-related GTP-binding family protein ... 113 1e-25
At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)... 113 1e-25
At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putati... 108 3e-24
At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putati... 104 5e-23
At5g47960.1 68418.m05925 Ras-related GTP-binding family protein ... 100 7e-22
At1g18200.1 68414.m02264 Ras-related GTP-binding family protein ... 95 3e-20
At3g12160.1 68416.m01516 Ras-related GTP-binding family protein ... 95 4e-20
At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putati... 95 5e-20
At3g07410.1 68416.m00883 Ras-related GTP-binding family protein ... 95 5e-20
At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putati... 95 5e-20
At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / sma... 94 6e-20
At1g73640.1 68414.m08525 Ras-related GTP-binding family protein ... 94 8e-20
At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putati... 94 8e-20
At5g65270.1 68418.m08210 Ras-related GTP-binding family protein ... 93 2e-19
At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small GTP... 92 3e-19
At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putati... 91 8e-19
At5g46025.1 68418.m05660 Ras-related GTP-binding family protein ... 84 9e-17
At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small GTP... 83 2e-16
At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putati... 82 3e-16
At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putati... 82 3e-16
At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putati... 80 1e-15
At5g59840.1 68418.m07503 Ras-related GTP-binding family protein ... 80 1e-15
At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putati... 80 1e-15
At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putati... 80 1e-15
At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small GTP... 80 1e-15
At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putati... 79 2e-15
At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putati... 79 2e-15
At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putati... 77 1e-14
At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2) id... 75 3e-14
At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putati... 72 3e-13
At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putati... 71 5e-13
At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 / ... 69 3e-12
At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putati... 68 5e-12
At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small GT... 67 1e-11
At3g16100.1 68416.m02034 Ras-related GTP-binding family protein ... 66 2e-11
At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putati... 66 2e-11
At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putati... 66 3e-11
At4g08190.1 68417.m01354 Ras-related GTP-binding protein, putati... 66 3e-11
At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putati... 63 2e-10
At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putati... 62 4e-10
At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putati... 62 4e-10
At5g03530.1 68418.m00309 Ras-related GTP-binding family protein ... 61 7e-10
At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putati... 61 7e-10
At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small GTP-... 60 1e-09
At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putati... 58 5e-09
At4g39890.1 68417.m05651 Ras-related GTP-binding family protein ... 58 7e-09
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 57 1e-08
At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putati... 54 6e-08
At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putati... 54 6e-08
At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putati... 54 1e-07
At4g07524.1 68417.m01175 GTP-binding protein, putative similar t... 44 1e-04
At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9) id... 43 2e-04
At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) / ... 42 3e-04
At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putati... 42 5e-04
At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3) ... 41 6e-04
At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2) id... 41 6e-04
At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein... 41 6e-04
At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein... 41 6e-04
At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) / ... 41 6e-04
At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) / ... 41 6e-04
At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /... 40 0.001
At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6) id... 40 0.002
At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1) (A... 40 0.002
At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7) id... 39 0.003
At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10) i... 39 0.003
At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8) id... 38 0.006
At5g54840.2 68418.m06831 GTP-binding family protein similar to S... 34 0.072
At5g54840.1 68418.m06830 GTP-binding family protein similar to S... 34 0.072
At3g21700.3 68416.m02737 expressed protein 34 0.072
At3g21700.2 68416.m02735 expressed protein 34 0.072
At3g21700.1 68416.m02736 expressed protein 34 0.072
At4g09720.2 68417.m01597 Ras-related GTP-binding protein, putati... 33 0.13
At5g65960.1 68418.m08303 expressed protein 32 0.29
At3g63150.1 68416.m07092 GTP-binding protein-related low similar... 32 0.29
At5g64813.1 68418.m08152 GTP-binding protein-related contains we... 31 0.51
At3g12080.1 68416.m01504 GTP-binding family protein contains Pfa... 30 1.6
At2g24060.1 68415.m02874 translation initiation factor 3 (IF-3) ... 29 2.1
At1g20050.1 68414.m02510 C-8,7 sterol isomerase identical to C-8... 29 2.1
At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to ... 29 2.7
At5g29070.1 68418.m03617 expressed protein 29 3.6
At2g16640.1 68415.m01910 chloroplast outer membrane protein, put... 29 3.6
At1g02440.1 68414.m00192 ADP-ribosylation factor, putative simil... 29 3.6
At5g25210.1 68418.m02989 expressed protein 28 4.8
At3g06650.1 68416.m00774 ATP-citrate synthase, putative / ATP-ci... 28 4.8
At5g57370.1 68418.m07168 expressed protein low similarity to nuc... 28 6.3
At5g01280.1 68418.m00037 expressed protein 28 6.3
At4g13030.2 68417.m02034 expressed protein 28 6.3
At4g13030.1 68417.m02033 expressed protein 28 6.3
At5g49460.1 68418.m06119 ATP-citrate synthase, putative / ATP-ci... 27 8.3
At5g43240.1 68418.m05284 hypothetical protein contains Pfam prof... 27 8.3
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 27 8.3
>At1g16920.1 68414.m02051 Ras-related GTP-binding protein, putative
similar to GTP binding protein GI:218228 from [Vicia
faba]; identical to cDNA small GTP-binding protein
(Rab11) GI:451859
Length = 216
Score = 120 bits (288), Expect = 1e-27
Identities = 54/62 (87%), Positives = 61/62 (98%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
ED+YDYLFKVVLIGDSGVGKS+LLSRFT+NEFNLESKSTIGVEFATR+++VDGK +KAQI
Sbjct: 7 EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 98.3 bits (234), Expect = 4e-21
Identities = 40/67 (59%), Positives = 56/67 (83%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ + ++ENV+RWL+EL++H D NI++MLVGNKSDLRHL ++PTE+ K++AE
Sbjct: 87 VGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAE 146
Query: 487 ANGLSFI 507
L F+
Sbjct: 147 QESLCFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 31.1 bits (67), Expect = 0.67
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 456 PDGGGESVRGSQRT*FYRTSALDSTNVEPAFQNILNR 566
P G+S + F TSAL++TNVE AF +L +
Sbjct: 137 PTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQ 173
>At5g60860.1 68418.m07634 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 117 bits (282), Expect = 6e-27
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+DEYDYLFKVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 105 bits (252), Expect = 3e-23
Identities = 45/67 (67%), Positives = 57/67 (85%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ +H+++ENVERWL+ELRDH D NI+IM VGNK+DLRHLR++ TE+AKAFAE
Sbjct: 87 VGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAE 146
Query: 487 ANGLSFI 507
F+
Sbjct: 147 RENTFFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 489 QRT*FYRTSALDSTNVEPAFQNILNR 566
+ T F TSAL+S NVE AF +L++
Sbjct: 148 ENTFFMETSALESMNVENAFTEVLSQ 173
>At5g45750.1 68418.m05624 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303744 from [Pisum
sativum]
Length = 216
Score = 116 bits (279), Expect = 1e-26
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+DEYDYLFKVVLIGDSGVGKS+LLSRFT+NEF+LESKSTIGVEFATRS+ VD K IKAQI
Sbjct: 7 DDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 99 bits (238), Expect = 1e-21
Identities = 43/67 (64%), Positives = 56/67 (83%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ +H ++ENVE WL+ELR+H D NI++MLVGNKSDLRHL ++ TE+AK+FAE
Sbjct: 87 VGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 146
Query: 487 ANGLSFI 507
L F+
Sbjct: 147 KESLYFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNILNR 566
F TSAL++TNVE AF +L +
Sbjct: 152 FMETSALEATNVENAFAEVLTQ 173
>At1g09630.1 68414.m01080 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1370146 from [Lotus
japonicus]
Length = 217
Score = 115 bits (277), Expect = 2e-26
Identities = 52/62 (83%), Positives = 61/62 (98%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
++EYDYLFKVVLIGDSGVGKS+LLSRFTRNEF LESKSTIGVEFATR+++V+G+T+KAQI
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQI 65
Query: 249 WD 254
WD
Sbjct: 66 WD 67
Score = 105 bits (253), Expect = 2e-23
Identities = 47/89 (52%), Positives = 66/89 (74%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GALLVYD+ K ++ENV RWL+ELRDHAD NI+IML+GNK+DL+HLR++ TE+A+++AE
Sbjct: 86 LGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAE 145
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
GLSFI + +T +E+Y
Sbjct: 146 KEGLSFIETSALEALNVEKAFQTILSEVY 174
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 69 AGQERYRAITSAYYRGA 85
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 114 bits (275), Expect = 4e-26
Identities = 54/67 (80%), Positives = 62/67 (92%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MGTRED-EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 233
M R D EYDYLFK+VLIGDSGVGKS++LSRFTRNEF LESKSTIGVEFATR+++V+GKT
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 234 IKAQIWD 254
+KAQIWD
Sbjct: 61 VKAQIWD 67
Score = 103 bits (246), Expect = 1e-22
Identities = 49/89 (55%), Positives = 61/89 (68%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDI K ++ENV RWLRELRDHAD NI+IM+ GNKSDL HLRS+ E+ ++ AE
Sbjct: 86 VGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAE 145
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
GLSF+ + +T +EIY
Sbjct: 146 KEGLSFLETSALEATNIEKAFQTILSEIY 174
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 69 AGQERYRAITSAYYRGA 85
>At4g18800.1 68417.m02776 Ras-related GTP-binding family protein
similar to ras-related GTP binding protein RIC2
SP:P40393 from [Oryza sativa]; contains Pfam profile:
PF00071 Ras family
Length = 214
Score = 113 bits (273), Expect = 7e-26
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+D+YDYLFKVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRS+ V+ K IKAQI
Sbjct: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 105 bits (251), Expect = 3e-23
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ +H ++ENVERWLRELRDH D NI++MLVGNKSDLRHL ++ TE+AK+FAE
Sbjct: 87 VGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAE 146
Query: 487 ANGLSFI 507
L F+
Sbjct: 147 NESLYFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNILNR 566
F TSAL+STNVE AF +L +
Sbjct: 152 FMETSALESTNVENAFSEVLTQ 173
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 113 bits (273), Expect = 7e-26
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+ EYDYLFK+VLIGDSGVGKS++LSRFTRNEF LESKSTIGVEFATR+ +V+GKTIKAQI
Sbjct: 6 DQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQI 65
Query: 249 WD 254
WD
Sbjct: 66 WD 67
Score = 100 bits (239), Expect = 1e-21
Identities = 48/89 (53%), Positives = 60/89 (67%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDI K +++NV RWLRELRDHAD NI+IM+ GNKSDL HLRS+ E+ ++ AE
Sbjct: 86 VGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAE 145
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
GLSF+ + +T EIY
Sbjct: 146 KEGLSFLETSALEATNVEKAFQTILGEIY 174
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 69 AGQERYRAITSAYYRGA 85
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 113 bits (272), Expect = 1e-25
Identities = 50/62 (80%), Positives = 60/62 (96%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
E +YDYLFK+VLIGDSGVGK+++LSRFTRNEF LESKSTIGVEFATR+++V+GKT+KAQI
Sbjct: 6 EQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQI 65
Query: 249 WD 254
WD
Sbjct: 66 WD 67
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDI K +++NV RWLRELRDHAD NI+IM+ GNK+DL HLRS+ E+ + AE
Sbjct: 86 VGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAE 145
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
GLSF+ + +T EIY
Sbjct: 146 TEGLSFLETSALEATNVEKAFQTVLAEIY 174
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 69 AGQERYRAITSAYYRGA 85
>At4g18430.1 68417.m02735 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 217
Score = 113 bits (271), Expect = 1e-25
Identities = 51/62 (82%), Positives = 59/62 (95%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+D+YDYLFK+VLIGDSGVGKS+LLSRFTRNEF++ESKSTIGVEFATRS+ VD K IKAQ+
Sbjct: 7 DDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQL 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 109 bits (262), Expect = 2e-24
Identities = 45/67 (67%), Positives = 60/67 (89%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDI +H+++ENVERWL+ELRDH D N++IMLVGNK+DLRHLR++PTEEA++F+E
Sbjct: 87 VGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKADLRHLRAVPTEEARSFSE 146
Query: 487 ANGLSFI 507
+ F+
Sbjct: 147 RENMFFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNILNR 566
F TSALD+TNVE AF ++L +
Sbjct: 152 FMETSALDATNVEQAFTHVLTQ 173
>At3g15060.1 68416.m01905 Ras-related GTP-binding family protein
similar to GTP-binding protein GI:303742 from [Pisum
sativum]; contains Pfam profile: PF00071 ras family
Length = 217
Score = 113 bits (271), Expect = 1e-25
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+D+YD+L+KVVLIGDSGVGKS+LLSRFTRNEF+LESKSTIGVEFATRSI VD K +KAQI
Sbjct: 7 DDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 105 bits (252), Expect = 3e-23
Identities = 45/67 (67%), Positives = 58/67 (86%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ +H+++ENVERWL+ELRDH + NI+IMLVGNK+DLRHLR++ TE+AKAFAE
Sbjct: 87 VGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKADLRHLRAVSTEDAKAFAE 146
Query: 487 ANGLSFI 507
F+
Sbjct: 147 RENTFFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 489 QRT*FYRTSALDSTNVEPAFQNILNR 566
+ T F TSAL++ NVE AF +L++
Sbjct: 148 ENTFFMETSALEALNVENAFTEVLSQ 173
>At1g06400.1 68414.m00677 Ras-related GTP-binding protein (ARA-2)
identical to Ras-related protein ARA-2 SP:P28185 from
[Arabidopsis thaliana]
Length = 216
Score = 113 bits (271), Expect = 1e-25
Identities = 50/62 (80%), Positives = 60/62 (96%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
++EYDYLFK+VLIGDSGVGKS+LLSRFT+NEFNLESKSTIGVEFAT++ +V+GK +KAQI
Sbjct: 7 DEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/67 (62%), Positives = 53/67 (79%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALL+YD+ +H ++EN RWLRELR H D NI++ML+GNK DLRHL ++ TEEAKAFAE
Sbjct: 87 VGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAE 146
Query: 487 ANGLSFI 507
L F+
Sbjct: 147 RESLYFM 153
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNILNR 566
F TSALD+TNVE AF +L +
Sbjct: 152 FMETSALDATNVENAFTEVLTQ 173
>At1g28550.1 68414.m03513 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from (Pisum
sativum)
Length = 218
Score = 108 bits (260), Expect = 3e-24
Identities = 48/67 (71%), Positives = 58/67 (86%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ +H+++ENVERWL+ELRDH D NI+IMLVGNK+DLRHLR+I TEEAKAFAE
Sbjct: 87 VGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAISTEEAKAFAE 146
Query: 487 ANGLSFI 507
F+
Sbjct: 147 RENTFFM 153
Score = 106 bits (255), Expect = 1e-23
Identities = 48/62 (77%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
ED+YDYLFKVVL GDSGVGKS+LLSRFTRN+F+ +S++TIGVEFATRSI+ D K +KAQI
Sbjct: 7 EDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 70 AGQERYRAITSAYYRGA 86
>At2g33870.1 68415.m04158 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303742 from [Pisum
sativum]
Length = 219
Score = 104 bits (250), Expect = 5e-23
Identities = 52/69 (75%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Frame = +3
Query: 57 MGT--REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFAT-RSIEVDG 227
MGT ED+YDYLFKVVL GDSGVGKS+LLSRFTRN+F+ +S+STIGVEFAT R I+VD
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRRGIQVDD 60
Query: 228 KTIKAQIWD 254
K +KAQIWD
Sbjct: 61 KIVKAQIWD 69
Score = 100 bits (240), Expect = 7e-22
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYD+ +H+++ENVERWL+ELRDH D N +IMLVGNK+DL HLR+I TEE K FAE
Sbjct: 88 VGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAISTEEVKDFAE 147
Query: 487 ANGLSFI 507
F+
Sbjct: 148 RENTFFM 154
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRAITSAYYRGA
Sbjct: 71 AGQERYRAITSAYYRGA 87
>At5g47960.1 68418.m05925 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 223
Score = 100 bits (240), Expect = 7e-22
Identities = 45/58 (77%), Positives = 54/58 (93%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
DY+FKVVLIGDS VGKS LL+RF+RNEF++ESK+TIGVEF TR++E+D KTIKAQIWD
Sbjct: 13 DYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWD 70
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/67 (61%), Positives = 54/67 (80%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGA+LVYDI K S+++V RWL ELR HAD+NI+IML+GNK+DL LR++PTE+AK FA+
Sbjct: 89 VGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQ 148
Query: 487 ANGLSFI 507
L F+
Sbjct: 149 RENLFFM 155
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRA+TSAYYRGA
Sbjct: 72 AGQERYRAVTSAYYRGA 88
Score = 30.7 bits (66), Expect = 0.89
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNIL 560
F TSALDS NVEP+F +L
Sbjct: 154 FMETSALDSNNVEPSFLTVL 173
>At1g18200.1 68414.m02264 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 354
Score = 95.5 bits (227), Expect = 3e-20
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
++E DYLFK VLIGDS VGKS+LLSRF+R+EF L+SK TIGV+FA R++ V KTIKAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 249 WD 254
WD
Sbjct: 67 WD 68
Score = 74.9 bits (176), Expect = 4e-14
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GALL+YDI + ++++N+E+WL ELR + +++LVGNKSDL R + EE K AE
Sbjct: 87 LGALLIYDITRRITFKNIEKWLSELRGFSSPETVVVLVGNKSDLGQSREVEEEEGKTLAE 146
Query: 487 ANGLSFI 507
+ GL F+
Sbjct: 147 SEGLYFL 153
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RAITS+YYRGA
Sbjct: 70 AGQERFRAITSSYYRGA 86
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +3
Query: 468 GESVRGSQRT*FYRTSALDSTNVEPAFQNILNR 566
G+++ S+ F TSAL++ NVE AF +++ R
Sbjct: 141 GKTLAESEGLYFLETSALENQNVEEAFLSMIGR 173
>At3g12160.1 68416.m01516 Ras-related GTP-binding family protein
similar to ras-related GTP-binding protein RGP1
SP:P25766 from [Oryza sativa];contains Pfam profile:
PF00071 Ras family
Length = 222
Score = 95.1 bits (226), Expect = 4e-20
Identities = 41/65 (63%), Positives = 54/65 (83%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + DY+FKVVLIGDS VGK+ LL+RF RNEF+++SK+TIGVEF T+++ +D KT+K
Sbjct: 6 GDYNQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVK 65
Query: 240 AQIWD 254
AQIWD
Sbjct: 66 AQIWD 70
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/89 (47%), Positives = 58/89 (65%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGA+LVYD+ K S++++ +WL ELR HAD+NI+IML+GNK DL LR++PTE+A+ FA+
Sbjct: 89 VGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLGSLRAVPTEDAQEFAQ 148
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
L F+ T TEIY
Sbjct: 149 RENLFFMETSALEATNVETAFLTILTEIY 177
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRA+TSAYYRGA
Sbjct: 72 AGQERYRAVTSAYYRGA 88
>At4g39990.1 68417.m05663 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303738 from [Pisum
sativum]
Length = 224
Score = 94.7 bits (225), Expect = 5e-20
Identities = 44/89 (49%), Positives = 59/89 (66%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGA+LVYD+ K ++E++ RWL ELR HAD+NI+I+L+GNKSDL R++PTE+AK FAE
Sbjct: 91 VGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAE 150
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
GL F+ T T+IY
Sbjct: 151 KEGLFFLETSALNATNVENSFNTLMTQIY 179
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/65 (63%), Positives = 54/65 (83%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + DY+FKVVLIGDS VGKS LL+RF R+EF+++SK+TIGVEF TR++ ++ K+IK
Sbjct: 8 GGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIK 67
Query: 240 AQIWD 254
AQIWD
Sbjct: 68 AQIWD 72
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRA+TSAYYRGA
Sbjct: 74 AGQERYRAVTSAYYRGA 90
>At3g07410.1 68416.m00883 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 217
Score = 94.7 bits (225), Expect = 5e-20
Identities = 43/67 (64%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 MGTREDE-YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 233
MG +D +YLFK+VLIGDS VGKS+LLSRF+R+EF+ SK+TIGVEF T+ +E++GK
Sbjct: 1 MGKEDDRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKE 60
Query: 234 IKAQIWD 254
+KAQIWD
Sbjct: 61 VKAQIWD 67
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GAL+VYDI + ++E+V+RWL+EL H D + MLVGNK DL +R++ EE KA AE
Sbjct: 87 GALIVYDITRGDTFESVKRWLQELNTHCDTAVAQMLVGNKCDLEDIRAVSVEEGKALAEE 146
Query: 490 NGLSFI 507
GL F+
Sbjct: 147 EGLFFM 152
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAW 310
AGQER+RA+TSAYYRGA+
Sbjct: 69 AGQERFRAVTSAYYRGAF 86
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 468 GESVRGSQRT*FYRTSALDSTNVEPAFQNIL 560
G+++ + F TSALD+TNV+ AF+ ++
Sbjct: 140 GKALAEEEGLFFMETSALDATNVDKAFEIVI 170
>At2g31680.1 68415.m03867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:289370 from [Brassica
napus]
Length = 219
Score = 94.7 bits (225), Expect = 5e-20
Identities = 40/58 (68%), Positives = 52/58 (89%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YLFK+V+IGDS VGKS+LLSR+ RNEFN SK+TIGVEF T+++E++GK +KAQIWD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWD 67
Score = 78.6 bits (185), Expect = 3e-15
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGAL+VYDI++ ++E+V RWL EL+ H+D + MLVGNK DL +R++ EE KA AE
Sbjct: 86 VGALVVYDISRRSTFESVGRWLDELKTHSDTTVARMLVGNKCDLESIRAVSVEEGKALAE 145
Query: 487 ANGLSFI 507
GL F+
Sbjct: 146 TEGLFFM 152
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RA+TSAYYRGA
Sbjct: 69 AGQERFRAVTSAYYRGA 85
Score = 30.7 bits (66), Expect = 0.89
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 468 GESVRGSQRT*FYRTSALDSTNVEPAFQNILNRDL 572
G+++ ++ F TSALDSTNV+ AF+ ++ RD+
Sbjct: 140 GKALAETEGLFFMETSALDSTNVKTAFEMVI-RDI 173
>At1g05810.1 68414.m00608 Ras-related protein (ARA-1) (ARA) / small
GTP-binding protein, putative nearly identical to
SP:P19892 Ras-related protein ARA-1 [Arabidopsis
thaliana] (Gene 76:313-319(1989))
Length = 261
Score = 94.3 bits (224), Expect = 6e-20
Identities = 41/62 (66%), Positives = 53/62 (85%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
E +YLFK+V+IGDS VGKS+LLSR+ RNEF+ SK+TIGVEF T+S+E++GK +KAQI
Sbjct: 49 EGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQI 108
Query: 249 WD 254
WD
Sbjct: 109 WD 110
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/67 (52%), Positives = 48/67 (71%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGAL+VYDI + ++E+V RWL EL+ H+D + MLVGNK DL ++R++ EE KA AE
Sbjct: 129 VGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAE 188
Query: 487 ANGLSFI 507
GL F+
Sbjct: 189 EEGLFFV 195
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RA+TSAYYRGA
Sbjct: 112 AGQERFRAVTSAYYRGA 128
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 468 GESVRGSQRT*FYRTSALDSTNVEPAFQNIL 560
G+++ + F TSALDSTNV+ AF+ ++
Sbjct: 183 GKALAEEEGLFFVETSALDSTNVKTAFEMVI 213
>At1g73640.1 68414.m08525 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 ras family Pfam profile:
PF00071 Ras family
Length = 233
Score = 93.9 bits (223), Expect = 8e-20
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +3
Query: 63 TREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKA 242
T E+E DYLFK VLIGDS VGKS+LLSRF+++EF +SK TIGVEFA R++ V K IKA
Sbjct: 5 TYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKA 64
Query: 243 QIWD 254
QIWD
Sbjct: 65 QIWD 68
Score = 77.8 bits (183), Expect = 6e-15
Identities = 32/67 (47%), Positives = 49/67 (73%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+GALL+YDI + +++N+++WL ELRD A+ +++LVGNKSDLR R + +E K AE
Sbjct: 87 LGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQSREVEEDEGKTLAE 146
Query: 487 ANGLSFI 507
+ GL F+
Sbjct: 147 SEGLYFL 153
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RAITS+YYRGA
Sbjct: 70 AGQERFRAITSSYYRGA 86
>At1g01200.1 68414.m00034 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GB:D12541 GI:303736 from
[Pisum sativum]
Length = 237
Score = 93.9 bits (223), Expect = 8e-20
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +3
Query: 54 KMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 233
K T ++ DY+FKVV+IGDS VGK+ LLSRFT NEF +SKSTIGVEF TR+I + GK
Sbjct: 17 KKPTMPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKL 76
Query: 234 IKAQIWD 254
+KAQIWD
Sbjct: 77 VKAQIWD 83
Score = 78.2 bits (184), Expect = 4e-15
Identities = 37/67 (55%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLR-HLRSIPTEEAKAFA 483
+GA++VYDI K LS+++V RW+ ELR HAD + +IMLVGNK+DL R++PTE+A FA
Sbjct: 102 LGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKADLSVGKRAVPTEDAVEFA 161
Query: 484 EANGLSF 504
E L F
Sbjct: 162 ETQRLFF 168
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERYRA+TSAYYRGA
Sbjct: 85 AGQERYRAVTSAYYRGA 101
>At5g65270.1 68418.m08210 Ras-related GTP-binding family protein
similar to GTP-binding protein RAB11A GI:1370142 from
[Lotus japonicus]; contains Pfam profile: PF00071 Ras
family
Length = 226
Score = 92.7 bits (220), Expect = 2e-19
Identities = 44/89 (49%), Positives = 60/89 (67%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGA+LVYDI + +++++ RWL ELR HAD+NI+I+L+GNKSDL R+IPTE+AK FAE
Sbjct: 91 VGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIPTEDAKEFAE 150
Query: 487 ANGLSFIGRRPWTLPTSSRPSRTF*TEIY 573
GL F+ + T TEI+
Sbjct: 151 KEGLFFLETSAFNATNVESAFSTVLTEIF 179
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/65 (61%), Positives = 54/65 (83%)
Frame = +3
Query: 60 GTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIK 239
G + DY+FKVVLIGDS VGKS +L+R+ R+EF+L+SK+TIGVEF TR++ +D K++K
Sbjct: 8 GDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVK 67
Query: 240 AQIWD 254
AQIWD
Sbjct: 68 AQIWD 72
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/29 (68%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = +2
Query: 230 DHKSSDM---GPAGQERYRAITSAYYRGA 307
DHKS AGQERYRA+TSAYYRGA
Sbjct: 62 DHKSVKAQIWDTAGQERYRAVTSAYYRGA 90
>At2g43130.1 68415.m05356 Ras-related protein (ARA-4) / small
GTP-binding protein, putative identical to SP:P28187
Ras-related protein ARA-4 {Arabidopsis thaliana}
Length = 214
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YLFK+V+IGDS VGKS+LL+R+ RNEFN SK+TIGVEF T+S+ +DGK +KAQIWD
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWD 67
Score = 77.8 bits (183), Expect = 6e-15
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGAL+VYDI + ++ENV RWL EL H+D + ML+GNK DL +R++ EE K+ AE
Sbjct: 86 VGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAE 145
Query: 487 ANGLSFI 507
+ GL F+
Sbjct: 146 SEGLFFM 152
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RA+TSAYYRGA
Sbjct: 69 AGQERFRAVTSAYYRGA 85
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 468 GESVRGSQRT*FYRTSALDSTNVEPAFQNIL 560
G+S+ S+ F TSALDSTNV+ AF+ ++
Sbjct: 140 GKSLAESEGLFFMETSALDSTNVKTAFEMVI 170
>At5g47520.1 68418.m05867 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11J GI:1370160 from
[Lotus japonicus]
Length = 221
Score = 90.6 bits (215), Expect = 8e-19
Identities = 41/58 (70%), Positives = 50/58 (86%)
Frame = +3
Query: 81 DYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
DYLFK+VLIGDS VGKS+LL+RF R+EF SKSTIGVEF T+ ++++GK IKAQIWD
Sbjct: 12 DYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWD 69
Score = 84.6 bits (200), Expect = 5e-17
Identities = 37/67 (55%), Positives = 50/67 (74%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
VGALLVYDI++ ++ ++ RWL EL H+D N++ +LVGNKSDL+ LR + T E KA AE
Sbjct: 88 VGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILVGNKSDLKDLREVSTAEGKALAE 147
Query: 487 ANGLSFI 507
A GL F+
Sbjct: 148 AQGLFFM 154
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+RA+TSAYYRGA
Sbjct: 71 AGQERFRAVTSAYYRGA 87
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 468 GESVRGSQRT*FYRTSALDSTNVEPAFQNIL 560
G+++ +Q F TSALDS+NV AF+ ++
Sbjct: 142 GKALAEAQGLFFMETSALDSSNVAAAFETVV 172
>At5g46025.1 68418.m05660 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 113
Score = 83.8 bits (198), Expect = 9e-17
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 RRVGALLVYDIAKHLSYENVERWLRELRDHAD-QNILIMLVGNKSDLRHLRSIPTEEAKA 477
R +GAL+VYDI H +++NVE+WL+ELR D ++IMLVGNKSDL H R + EEAK+
Sbjct: 16 RAMGALIVYDITSHTTFKNVEQWLKELRGFFDTDKLMIMLVGNKSDLDHRREVSMEEAKS 75
Query: 478 FAEANGLSFI 507
FAE L FI
Sbjct: 76 FAEKEKLLFI 85
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 501 FYRTSALDSTNVEPAFQNILNRDLQD 578
F TSALD+TNVE F N+L + D
Sbjct: 84 FIETSALDATNVEECFTNVLTQIYND 109
>At1g02130.1 68414.m00139 Ras-related protein (ARA-5) / small
GTP-binding protein, putative identical to Ras-related
protein ARA-5 SP:P28188 from [Arabidopsis thaliana]
Length = 203
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
EYDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R++E DGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYD+ S+ NV++WL E+ +A N+ +LVGNKSDL R+IP E AKAFA+
Sbjct: 83 GIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADE 142
Query: 490 NGLSFI 507
G+ F+
Sbjct: 143 IGIPFM 148
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 65 AGQERFRTITSSYYRGA 81
>At5g47200.1 68418.m05820 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:303750 from [Pisum
sativum]
Length = 202
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++E DGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++ YD+ S+ NV++WL E+ +A +N+ +LVGNK+DL + + TE AKAFA+
Sbjct: 83 GIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKVVSTETAKAFADE 142
Query: 490 NGLSFI 507
G+ F+
Sbjct: 143 LGIPFL 148
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 65 AGQERFRTITSSYYRGA 81
>At4g17530.1 68417.m02622 Ras-related GTP-binding protein, putative
very strong similarity to RAB1C [Lotus corniculatus var.
japonicus] GI:1370166; contains Pfam profile PF00071:
Ras family
Length = 202
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++E DGKTIK QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/66 (40%), Positives = 43/66 (65%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++ YD+ S+ NV++WL E+ +A +N+ +LVGNK DL + + TE AKAFA+
Sbjct: 83 GIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTSQKVVSTETAKAFADE 142
Query: 490 NGLSFI 507
G+ F+
Sbjct: 143 LGIPFL 148
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 65 AGQERFRTITSSYYRGA 81
>At3g11730.1 68416.m01439 Ras-related GTP-binding protein, putative
similar to Rab1-like small GTP-binding protein
GI:4096662 from [Petunia x hybrida]
Length = 205
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = +3
Query: 72 DEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIW 251
+EYDYLFK++LIGDS VGKS LL RF + + STIGV+F R+IE DGKTIK QIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 252 D 254
D
Sbjct: 63 D 63
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/66 (33%), Positives = 44/66 (66%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
G ++VYD + S+ NV++WL E+ +A++++ +L+GNK+D+ + + TE +A A+
Sbjct: 83 GIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADE 142
Query: 490 NGLSFI 507
G+ F+
Sbjct: 143 LGIPFL 148
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R ITS+YYRGA
Sbjct: 65 AGQERFRTITSSYYRGA 81
>At5g59840.1 68418.m07503 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+IE+DGK IK QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Score = 60.9 bits (141), Expect = 7e-10
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFA 483
+G LLVYD+ S+ N+ W+R + HA N+ +LVGNK+D+ R++P + +A A
Sbjct: 89 MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALA 148
Query: 484 EANGLSF 504
+ G+ F
Sbjct: 149 DEYGIKF 155
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 72 AGQERFRTITTAYYRGA 88
>At3g53610.2 68416.m05922 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+IE+DGK IK QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFA 483
+G LLVYD+ S+ N+ W+R + HA ++ +LVGNK+D+ R++P + +A A
Sbjct: 89 MGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALA 148
Query: 484 EANGLSF 504
+ G+ F
Sbjct: 149 DEYGMKF 155
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 72 AGQERFRTITTAYYRGA 88
>At3g53610.1 68416.m05921 Ras-related GTP-binding protein, putative
similar to Ras-related protein ARA-3 SP:P28186 from
[Arabidopsis thaliana]
Length = 216
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+IE+DGK IK QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFA 483
+G LLVYD+ S+ N+ W+R + HA ++ +LVGNK+D+ R++P + +A A
Sbjct: 89 MGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALA 148
Query: 484 EANGLSF 504
+ G+ F
Sbjct: 149 DEYGMKF 155
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 72 AGQERFRTITTAYYRGA 88
>At3g46060.1 68416.m04984 Ras-related protein (ARA-3) / small
GTP-binding protein, putative identical to SP|P28186
Ras-related protein ARA-3 {Arabidopsis thaliana};
contains Pfam profile: PF00071 Ras family
Length = 216
Score = 79.8 bits (188), Expect = 1e-15
Identities = 36/60 (60%), Positives = 45/60 (75%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+IE+DGK IK QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFA 483
+G LLVYD+ S+ N+ W+R + HA N+ +LVGNK+D+ R++PT + +A A
Sbjct: 89 MGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148
Query: 484 EANGLSF 504
+ G+ F
Sbjct: 149 DEYGIKF 155
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 72 AGQERFRTITTAYYRGA 88
>At5g03520.1 68418.m00308 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871508 from [Pisum
sativum]
Length = 216
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R++E+DGK IK QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Score = 61.7 bits (143), Expect = 4e-10
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFA 483
+G LLVYD+ S+ N+ W++ + HA N+ +LVGNK+D+ R++PT + +A A
Sbjct: 89 MGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALA 148
Query: 484 EANGLSF 504
+ G+ F
Sbjct: 149 DEYGIKF 155
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 72 AGQERFRTITTAYYRGA 88
>At3g09900.1 68416.m01180 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:871510 from [Pisum
sativum]; contains Pfam profile: PF00071 Ras family
Length = 218
Score = 79.4 bits (187), Expect = 2e-15
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +3
Query: 75 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R++E+DGK IK QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +1
Query: 307 VGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL-RHLRSIPTEEAKAFA 483
+G LLVYD+ S+ N+ W++ + HA ++ +LVGNK+D+ R++PT + +A A
Sbjct: 89 MGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALA 148
Query: 484 EANGLSF 504
+ G+ F
Sbjct: 149 DEYGIKF 155
Score = 34.7 bits (76), Expect = 0.055
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R IT+AYYRGA
Sbjct: 72 AGQERFRTITTAYYRGA 88
>At4g35860.1 68417.m05093 Ras-related GTP-binding protein, putative
similar to Rab2-like GTP-binding protein GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 76.6 bits (180), Expect = 1e-14
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + VDG+ IK QIWD
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWD 61
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/66 (46%), Positives = 46/66 (69%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GALLVYDI + ++ ++ WL + R HA+ N+ IML+GNK DL H R++ EE + FA+
Sbjct: 81 GALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKE 140
Query: 490 NGLSFI 507
+GL F+
Sbjct: 141 HGLLFL 146
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQE +R+IT +YYRGA
Sbjct: 63 AGQESFRSITRSYYRGA 79
>At4g17170.1 68417.m02583 Rab2-like GTP-binding protein (RAB2)
identical to Rab2-like protein (At-RAB2) GI:1765896 from
[Arabidopsis thaliana]
Length = 211
Score = 75.4 bits (177), Expect = 3e-14
Identities = 32/66 (48%), Positives = 47/66 (71%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
GALLVYDI + ++ ++ WL + R HA+ N+ IML+GNK DL H R++ TEE + FA+
Sbjct: 81 GALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKE 140
Query: 490 NGLSFI 507
+GL F+
Sbjct: 141 HGLIFM 146
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWD
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
Score = 30.7 bits (66), Expect = 0.89
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQE +R+IT +YYRGA
Sbjct: 63 AGQESFRSITRSYYRGA 79
>At4g17160.1 68417.m02582 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:1208537 from [Glycine
max]
Length = 205
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/68 (45%), Positives = 44/68 (64%)
Frame = +1
Query: 304 RVGALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
R G LLVYDI + ++ ++ WL E R HA +N+ ML+GNK DL R++ TEE + FA
Sbjct: 79 RAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNKCDLEDKRTVSTEEGEQFA 138
Query: 484 EANGLSFI 507
+GL F+
Sbjct: 139 REHGLIFM 146
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
Y Y FK ++IGD+GVGKS LL +FT F TIGVEF ++I +D K IK QIWD
Sbjct: 3 YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWD 61
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 257 AGQERYRAITSAYYRG 304
AGQE +R++T +YYRG
Sbjct: 63 AGQESFRSVTRSYYRG 78
>At1g43890.1 68414.m05059 Ras-related GTP-binding protein, putative
similar to GTP-binding protein(RAB1Y) GI:1370173 from
(Lotus japonicus)
Length = 212
Score = 71.3 bits (167), Expect = 5e-13
Identities = 34/62 (54%), Positives = 44/62 (70%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+ E+DYLFKV+LIGDSGVGKSSLL FT N F+ + TIGV+F + + + K +K I
Sbjct: 7 QPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAI 65
Query: 249 WD 254
WD
Sbjct: 66 WD 67
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENV-ERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G ++VYD+ + ++ N+ + W +E+ ++ +Q+ + MLVGNK D R++ +E FA
Sbjct: 87 GIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFA 146
Query: 484 EANGLSFI 507
G F+
Sbjct: 147 REYGCLFL 154
Score = 33.9 bits (74), Expect = 0.096
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R +TS+YYRGA
Sbjct: 69 AGQERFRTLTSSYYRGA 85
>At1g22740.1 68414.m02841 Ras-related protein (RAB7) / AtRab75 /
small GTP-binding protein, putative identical to
SP:O04157 Ras-related protein Rab7 (AtRab75)
[Arabidopsis thaliana]
Length = 203
Score = 68.9 bits (161), Expect = 3e-12
Identities = 25/56 (44%), Positives = 44/56 (78%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL++++ N+F+ + K+TIG +F T+ +++D + + QIWD
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWD 63
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHADQN----ILIMLVGNKSDLRHLRSIPTEEAKA 477
+LVYD+ S+E+++ W E A +L+GNK D+ S E KA
Sbjct: 85 VLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVVSEKKA 142
>At2g21880.1 68415.m02600 Ras-related GTP-binding protein, putative
similar to Ras family GTP-binding protein SP:Q43463 from
[Glycine max]
Length = 212
Score = 68.1 bits (159), Expect = 5e-12
Identities = 26/56 (46%), Positives = 43/56 (76%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL++++ +FN + K+TIG +F T+ + +D K++ QIWD
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWD 64
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER++++ +A+YRGA
Sbjct: 66 AGQERFQSLGAAFYRGA 82
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDL 438
+LVYD+ S+E + W E A+ + +L+GNK+D+
Sbjct: 86 VLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFVLIGNKTDV 130
>At3g54840.1 68416.m06076 Rab GTPase (ARA6) identical to small
GTPase Ara6 [Arabidopsis thaliana] GI:13160603
Length = 202
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYDI S++ + W++EL+ H +I++ LVGNK+DL R +PTE+ AE N
Sbjct: 110 AVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKN 169
Query: 493 GLSFI 507
G+ FI
Sbjct: 170 GMFFI 174
Score = 60.9 bits (141), Expect = 7e-10
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWD 254
K+VL+GDSGVGKS ++ RF R +F+ SK T+G F +++I + D T+K +IWD
Sbjct: 35 KLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQERY A+ YYRGA
Sbjct: 91 AGQERYSALAPLYYRGA 107
>At3g16100.1 68416.m02034 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 66.1 bits (154), Expect = 2e-11
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL+++F +F+ + K+TIG +F T+ +++D + QIWD
Sbjct: 8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWD 63
>At1g52280.1 68414.m05899 Ras-related GTP-binding protein, putative
similar to RAB7D GI:1370187 from [Lotus japonicus]
(Plant J. 11 (2), 237-250 (1997)); contains Pfam
PF00071: Ras family
Length = 206
Score = 66.1 bits (154), Expect = 2e-11
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL+++F +F+ + K+TIG +F T+ +++D + QIWD
Sbjct: 8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWD 63
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDL--RHLRSIPTEEAKA 477
+LVYD+ S++N+ W E A +N +++GNK+D+ R + ++AKA
Sbjct: 85 VLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGKSRVVSEKKAKA 144
Query: 478 FAEANG 495
+ + G
Sbjct: 145 WCASKG 150
>At4g09720.1 68417.m01596 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 206
Score = 65.7 bits (153), Expect = 3e-11
Identities = 24/56 (42%), Positives = 43/56 (76%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL++++ +F+++ K+TIG +F T+ +++ K + QIWD
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER++++ +A+YRGA
Sbjct: 65 AGQERFQSLGAAFYRGA 81
>At4g08190.1 68417.m01354 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11A
(Swiss-Prot:Q96283) [Arabidopsis thaliana]
Length = 127
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = +1
Query: 337 KHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEANGLSFI 507
+ L E ++RWLRELRDHAD NI+IM+ GNK+DL HLRS+ E+ + LSF+
Sbjct: 60 RSLMKERLQRWLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDGH---KTESLSFL 113
>At4g19640.1 68417.m02884 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB5A GI:1370178 from
[Lotus japonicus]
Length = 200
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/65 (36%), Positives = 44/65 (67%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++V+D+ S+E ++W++EL+ + N+++ L GNKSDL R + E+A+ +A+ N
Sbjct: 86 AIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQTYAQEN 145
Query: 493 GLSFI 507
GL F+
Sbjct: 146 GLFFM 150
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+VL+GD G GKSSL+ RF +++F +STIG F ++++ V+ T+K +IWD
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWA 313
AGQERY ++ YYRGA A
Sbjct: 67 AGQERYHSLAPMYYRGAAA 85
>At3g18820.1 68416.m02390 Ras-related GTP-binding protein, putative
similar to Ras-related protein RAB7 GI:1370186 from
[Pisum sativum], Plant Mol. Biol. 21 (6), 1195-1199
(1993); contains Pfam profile: PF00071 Ras family
Length = 206
Score = 61.7 bits (143), Expect = 4e-10
Identities = 23/56 (41%), Positives = 41/56 (73%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL++++ +F+ + K+TIG +F T+ ++ + + QIWD
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDL--RHLRSIPTEEAKA 477
+LVYD+ S+EN+ W E A +N +L+GNK D+ + R + ++AKA
Sbjct: 85 VLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVVSEKKAKA 144
Query: 478 FAEANG 495
+ + G
Sbjct: 145 WCASKG 150
>At1g49300.1 68414.m05526 Ras-related GTP-binding protein, putative
contains Pfam profile: PF00071 Ras family
Length = 206
Score = 61.7 bits (143), Expect = 4e-10
Identities = 23/56 (41%), Positives = 41/56 (73%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
L KV+++GDSGVGK+SL++++ +F+ + K+TIG +F T+ ++ + + QIWD
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERWLRELRDHAD----QNILIMLVGNKSDL--RHLRSIPTEEAKA 477
+LVYD+ S+E++ W E A +N +++GNK D+ R + ++A+A
Sbjct: 85 VLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVIGNKIDVDGGSSRVVSEKKARA 144
Query: 478 FAEANG 495
+ + G
Sbjct: 145 WCASKG 150
>At5g03530.1 68418.m00309 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 210
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YD FK++LIGDSGVGKSSLL F + + TIGV+F + + V GK +K IWD
Sbjct: 10 YDLSFKILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWD 67
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 310 GALLVYDIAKHLSYEN-VERWLRELRDHA-DQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
G +LVYD+ + ++ N V+ W +E+ ++ +Q + MLVGNK D R + EE A A
Sbjct: 87 GIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRESERGVSREEGIALA 146
Query: 484 EANGLSFI 507
+ F+
Sbjct: 147 KELNCMFL 154
Score = 33.9 bits (74), Expect = 0.096
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER+R +TS+YYRGA
Sbjct: 69 AGQERFRTLTSSYYRGA 85
>At3g09910.1 68416.m01181 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:2723477 from
[Arabidopsis thaliana] ;contains Pfam profile: PF00071
Ras family
Length = 205
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +3
Query: 78 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
YD FK++LIGDSGVGKSSLL F + + TIGV+F + ++V GK +K IWD
Sbjct: 10 YDLSFKILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWD 67
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 310 GALLVYDIAKHLSYENV-ERWLRELRDHADQNILI-MLVGNKSDLRHLRSIPTEEAKAFA 483
G +LVYD+ K ++ N+ + W +E+ ++ + I MLVGNK D R + EE A A
Sbjct: 87 GIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRESERKVSREEGMALA 146
Query: 484 E 486
+
Sbjct: 147 K 147
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 197 IRNKKYRGRR*DHKSSDMGPAGQERYRAITSAYYRGA 307
I+ K RG+R K + AGQE++R +TS+Y+RG+
Sbjct: 51 IKQMKVRGKR--LKLTIWDTAGQEKFRTLTSSYFRGS 85
>At5g45130.1 68418.m05540 Ras-related protein (RHA1) / small
GTP-binding protein identical to Ras-related protein
RHA1 SP:P31582 from [Arabidopsis thaliana]
Length = 200
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++V+DI S+E ++W++EL+ + N+++ L GNK+DL R + EEA+ +A+ N
Sbjct: 86 AIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQEN 145
Query: 493 GLSFI 507
L F+
Sbjct: 146 SLFFM 150
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K+VL+GD G GKSSL+ RF +++F +STIG F ++++ V+ T+K +IWD
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWD 65
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGAWA 313
AGQERY ++ YYRGA A
Sbjct: 67 AGQERYHSLAPMYYRGAAA 85
>At2g22290.1 68415.m02645 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 207
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYD+A LS+ N +W+ E+R+ +++I+LVGNK+DL R + EE +
Sbjct: 85 AVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLVGNKTDLVEKRQVSIEEGDSKGREY 144
Query: 493 GLSFI 507
G+ FI
Sbjct: 145 GVMFI 149
Score = 57.2 bits (132), Expect = 9e-09
Identities = 19/55 (34%), Positives = 43/55 (78%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V +GD VGK+S+++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WD
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
>At4g39890.1 68417.m05651 Ras-related GTP-binding family protein
contains Pfam profile: PF00071 Ras family
Length = 214
Score = 57.6 bits (133), Expect = 7e-09
Identities = 20/55 (36%), Positives = 42/55 (76%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V +GD VGK+S+++RF ++F+ + TIG++F ++++ ++ +T++ Q+WD
Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWD 64
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLREL-RDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEA 489
A++VYD++ ++ N +W+ ++ R+ N++I+LVGNK+DL R + E + +
Sbjct: 85 AIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDKGKE 144
Query: 490 NGLSFI 507
G+ FI
Sbjct: 145 YGVMFI 150
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYD+A S+ N +W+ E+R +++++LVGNK+DL R + EEA+A A
Sbjct: 85 AVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKAREL 144
Query: 493 GLSFI 507
+ FI
Sbjct: 145 NVMFI 149
Score = 56.4 bits (130), Expect = 2e-08
Identities = 19/55 (34%), Positives = 43/55 (78%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V +GD VGK+S+++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WD
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
>At5g64990.1 68418.m08174 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:550072 from [Homo
sapiens]
Length = 206
Score = 54.4 bits (125), Expect = 6e-08
Identities = 19/55 (34%), Positives = 39/55 (70%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
+K+V +GD GVGK+S+++ F +F+ ++TIG++F +++ + +T + Q+WD
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWD 62
Score = 53.2 bits (122), Expect = 1e-07
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYD+A S+ N +W+ E+R ++I+LVGNK+DL + R + EE + A
Sbjct: 83 AVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNKRQVSIEEGENKAREF 142
Query: 493 GLSFI 507
G F+
Sbjct: 143 GALFM 147
>At5g10260.1 68418.m01191 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab-6A SP:P20340 from
[Homo sapiens]
Length = 178
Score = 54.4 bits (125), Expect = 6e-08
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
A++VYD+A S+ N +W+ ++R +++I+LVGNK+DL R + EE A
Sbjct: 56 AVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDNKARDY 115
Query: 493 GLSFI 507
G+ FI
Sbjct: 116 GVIFI 120
Score = 33.1 bits (72), Expect = 0.17
Identities = 9/33 (27%), Positives = 26/33 (78%)
Frame = +3
Query: 156 NEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
++F+ ++TIG++F ++++ ++ +T++ Q+WD
Sbjct: 3 DKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWD 35
>At5g39620.1 68418.m04798 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A GI:1370182 from
[Lotus japonicus]
Length = 204
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K++L+GDSGVGK+SLL R+ +F STI V+ T+ I + + + QIWD
Sbjct: 7 KIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWD 60
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 316 LLVYDIAKHLSYENVERW----LRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFA 483
+LVYD+ ++E+++ W +++ +L+GNK+D+ + + P AK A
Sbjct: 82 VLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTDVNNGK--PRVVAKEIA 139
Query: 484 E 486
+
Sbjct: 140 D 140
>At4g07524.1 68417.m01175 GTP-binding protein, putative similar to
GTP-binding protein [Pisum sativum]
gi|303736|dbj|BAA02109
Length = 70
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 159 EFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
EF ESKSTI +EF TR+I + GK +K QIW+
Sbjct: 2 EFCYESKSTISMEFQTRTITLQGKLVKDQIWE 33
>At2g44690.1 68415.m05562 Rac-like GTP-binding protein (ARAC9)
identical to rac-like protein ARAC9 GI:5381419 from
[Arabidopsis thaliana]
Length = 209
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ LL +T N F + T+ F ++ VDGKT+ +WD
Sbjct: 20 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-NANVLVDGKTVNLGLWD 72
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHLRSIP 459
+L + + S+EN+ ++W+ ELR +A + I+LVG KSDLR P
Sbjct: 94 ILAFSLISRPSFENIAKKWVPELRHYAP-TVPIVLVGTKSDLRDNMQFP 141
>At4g35020.1 68417.m04967 Rac-like GTP-binding protein (ARAC3) /
Rho-like GTP-binding protein (ROP6) identical to
SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
identical to cDNA Rho-like GTP binding protein (Rop6)
GI:2645642
Length = 198
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ LL +T N F + T+ F+ I VDG TI +WD
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVI-VDGNTINLGLWD 60
>At5g55080.1 68418.m06866 Ras-related GTP-binding protein, putative
similar to GTP-binding protein atran3 GI:2058280 from
[Arabidopsis thaliana]
Length = 222
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK++++GD G GK++ L R EF ++ T+GV+ + I+ + WD
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWD 68
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/42 (40%), Positives = 29/42 (69%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDL 438
A++++D+ +Y N++RW R+LR +NI I+L GNK D+
Sbjct: 89 AIIMFDVTARHTYMNIDRWYRDLR-RVCKNIPIVLCGNKVDV 129
>At5g55190.1 68418.m06880 Ras-related GTP-binding protein (RAN3)
identical to atran3 [Arabidopsis thaliana] GI:2058280
Length = 221
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V++GD G GK++ + R EF + + TIGVE + I+ WD
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 444
A++++D+ L+Y+NV W R+L +NI I+L GNK D+++
Sbjct: 89 AIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
>At5g45970.1 68418.m05652 Rac-like GTP-binding protein (ARAC2)
identical to RAC-like GTP binding protein ARAC2
SP:Q38903
Length = 201
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG T+ +WD
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWD 60
Score = 37.1 bits (82), Expect = 0.010
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
LL + + SYEN+ ++WL EL+ +A I I+LVG K DLR
Sbjct: 82 LLAFSLISKASYENIHKKWLPELKHYAP-GIPIVLVGTKLDLR 123
>At5g20020.1 68418.m02382 Ras-related GTP-binding nuclear protein
(RAN-2) identical to GTP-binding nuclear protein RAN-2
SP:P41917 from [Arabidopsis thaliana]
Length = 221
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V++GD G GK++ + R EF + + TIGVE + I+ WD
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 444
A++++D+ L+Y+NV W R+L +NI I+L GNK D+++
Sbjct: 89 AIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
>At5g20010.1 68418.m02381 Ras-related GTP-binding nuclear protein
(RAN-1) identical to GTP-binding nuclear protein RAN-1
SP:P41916 from [Arabidopsis thaliana]
Length = 221
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 90 FKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
FK+V++GD G GK++ + R EF + + TIGVE + I+ WD
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWD 68
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/44 (38%), Positives = 30/44 (68%)
Frame = +1
Query: 313 ALLVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRH 444
A++++D+ L+Y+NV W R+L +NI I+L GNK D+++
Sbjct: 89 AIIMFDVTARLTYKNVPTWHRDL-CRVCENIPIVLCGNKVDVKN 131
>At1g75840.1 68414.m08809 Rac-like GTP-binding protein (ARAC5) /
Rho-like GTP-binding protein (ROP4) identical to
RAC-like GTP-binding protein (ARAC5) SP:Q38937
[Arabidopsis thaliana], Rho-like GTP binding protein
[Arabidopsis thaliana] GI:2654009; identical to cDNA
Rho-like GTP binding protein (Rop4) GI:2654008
Length = 196
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG T+ +WD
Sbjct: 8 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWD 60
>At1g20090.1 68414.m02514 Rac-like GTP-binding protein (ARAC4) /
Rho-like GTP-binding protein (ROP2) identical to
SP:Q38919 RAC-like GTP binding protein ARAC4 (GTP
binding protein ROP2) [Arabidopsis thaliana], Rho-like
GTP binding protein [Arabidopsis thaliana] GI:2654009
Length = 195
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ +L +T N F + T+ F+ ++ VDG T+ +WD
Sbjct: 7 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGNTVNLGLWD 59
>At3g51300.1 68416.m05615 Rac-like GTP-binding protein (ARAC11) /
Rho-like GTP-binding protein (ROP1) identical to GTP
binding protein Rop1At [Arabidopsis thaliana]
GI:2558666, rac-like GTP binding protein Arac11
[Arabidopsis thaliana] GI:3603426
Length = 197
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ LL +T N F + T+ F+ ++ V+G T+ +WD
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGSTVNLGLWD 60
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
+L + + SYENV ++W+ EL+ +A + I+LVG K DLR
Sbjct: 82 ILAFSLISKASYENVSKKWIPELKHYAP-GVPIVLVGTKLDLR 123
>At4g35950.1 68417.m05115 Rac-like GTP-binding protein (ARAC6)
identical to rac-like GTP binding protein Arac6
GI:3406757 from [Arabidopsis thaliana]
Length = 197
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ LL +T N F + T+ F+ ++ V+G T+ +WD
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGATVNLGLWD 60
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
+L + + SYENV ++W+ EL+ +A + I+LVG K DLR
Sbjct: 82 ILAFSLISKASYENVSKKWIPELKHYAP-GVPIVLVGTKLDLR 123
>At2g17800.1 68415.m02063 Rac-like GTP-binding protein (ARAC1)
(ATGP2) identical to Rac-like GTP-binding protein
(ARAC1) SP:Q38902 from [Arabidopsis thaliana]
Length = 197
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ LL +T N F + T+ F+ ++ V+G T+ +WD
Sbjct: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVNGATVNLGLWD 60
Score = 35.5 bits (78), Expect = 0.031
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
+L + + SYENV ++W+ EL+ +A + I+LVG K DLR
Sbjct: 82 ILAFSLISKASYENVSKKWIPELKHYAP-GVPIVLVGTKLDLR 123
>At4g28950.1 68417.m04136 Rac-like GTP-binding protein (ARAC7)
identical to rac GTP binding protein Arac7 GI:3702962
from [Arabidopsis thaliana]
Length = 209
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ +L +T N+F + T+ F+ ++ VDG+ + +WD
Sbjct: 8 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGQIVNLGLWD 60
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAEAN 492
+L + + SYENV ++W+ ELR A N+ I+LVG K DLR + +
Sbjct: 82 VLAFSLISKASYENVLKKWMPELRRFAP-NVPIVLVGTKLDLRDDKGYLADHTNVITSTQ 140
Query: 493 G 495
G
Sbjct: 141 G 141
>At5g62880.1 68418.m07890 Rac-like GTP-binding protein (ARAC10)
identical to rac GTP binding protein Arac10 [Arabidopsis
thaliana] GI:3702964, rac-like GTP binding protein
Arac10 [Arabidopsis thaliana] GI:7211193; contains Pfam
profile: PF00071 Ras family
Length = 215
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ +L +T N+F + T+ F+ ++ V+G T+ +WD
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVVVEGTTVNLGLWD 62
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLR 441
+L + + SYENV ++W+ EL+ H + ++LVG K DLR
Sbjct: 84 VLSFSLVSRASYENVFKKWIPELQ-HFAPGVPLVLVGTKLDLR 125
>At3g48040.1 68416.m05237 Rac-like GTP-binding protein (ARAC8)
identical to rac GTP binding protein Arac8 GI:3702966
from [Arabidopsis thaliana]
Length = 208
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWD 254
K V +GD VGK+ +L +T N+F + T+ F+ ++ V+G T+ +WD
Sbjct: 10 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSV-NVVVEGITVNLGLWD 62
Score = 35.5 bits (78), Expect = 0.031
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 316 LLVYDIAKHLSYENV-ERWLRELRDHADQNILIMLVGNKSDLRHLR 450
+L + + SYENV ++W+ EL+ H + I+LVG K DLR R
Sbjct: 84 VLAFSLISRASYENVFKKWIPELQ-HFAPGVPIVLVGTKMDLREDR 128
>At5g54840.2 68418.m06831 GTP-binding family protein similar to
SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase
spg1)(Sid3 protein) {Schizosaccharomyces pombe}
Length = 215
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 54 KMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 233
+ G+ D K+ L+GD GK++ + ++ +E N G+ ++ V G T
Sbjct: 90 RFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYVGDE-NQSFLEMTGLNLMDKTFYVQGVT 148
Query: 234 IKAQIWD 254
I IWD
Sbjct: 149 ISFSIWD 155
>At5g54840.1 68418.m06830 GTP-binding family protein similar to
SP|P87027 Septum-promoting GTP-binding protein 1 (GTPase
spg1)(Sid3 protein) {Schizosaccharomyces pombe}
Length = 288
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 54 KMGTREDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKT 233
+ G+ D K+ L+GD GK++ + ++ +E N G+ ++ V G T
Sbjct: 90 RFGSSSDSDLVSLKISLLGDCQTGKTTFVVKYVGDE-NQSFLEMTGLNLMDKTFYVQGVT 148
Query: 234 IKAQIWD 254
I IWD
Sbjct: 149 ISFSIWD 155
>At3g21700.3 68416.m02737 expressed protein
Length = 292
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS-TIGVEFATRSIEVDGKTIKA 242
R D K+ L+GD +GK+S L+++ E +E + G+ +++ + G I
Sbjct: 99 RSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKGINCTDKTLYMGGARISY 158
Query: 243 QIWD 254
IW+
Sbjct: 159 SIWE 162
>At3g21700.2 68416.m02735 expressed protein
Length = 248
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS-TIGVEFATRSIEVDGKTIKA 242
R D K+ L+GD +GK+S L+++ E +E + G+ +++ + G I
Sbjct: 99 RSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKGINCTDKTLYMGGARISY 158
Query: 243 QIWD 254
IW+
Sbjct: 159 SIWE 162
>At3g21700.1 68416.m02736 expressed protein
Length = 291
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 66 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLESKS-TIGVEFATRSIEVDGKTIKA 242
R D K+ L+GD +GK+S L+++ E +E + G+ +++ + G I
Sbjct: 99 RSDSDLVSLKISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKGINCTDKTLYMGGARISY 158
Query: 243 QIWD 254
IW+
Sbjct: 159 SIWE 162
>At4g09720.2 68417.m01597 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB7A from [Lotus
japonicus]
Length = 172
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 168 LESKSTIGVEFATRSIEVDGKTIKAQIWD 254
++ K+TIG +F T+ +++ K + QIWD
Sbjct: 1 MQYKATIGADFVTKELQIGEKLVTLQIWD 29
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/17 (58%), Positives = 16/17 (94%)
Frame = +2
Query: 257 AGQERYRAITSAYYRGA 307
AGQER++++ +A+YRGA
Sbjct: 31 AGQERFQSLGAAFYRGA 47
>At5g65960.1 68418.m08303 expressed protein
Length = 393
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVE 197
V+++G SGVGK +LLSR EF S+S+ E
Sbjct: 7 VLVVGSSGVGKRTLLSRLLSVEFEDSSESSSQTE 40
>At3g63150.1 68416.m07092 GTP-binding protein-related low similarity
to SP|Q38912 RAC-like GTP binding protein ARAC3
(GTP-binding protein ROP6) {Arabidopsis thaliana};
contains Pfam profile PF00036: EF hand (domain)
Length = 643
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 87 LFKVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQI 248
+F+ + G GKS+LL F +F+ K+T+G +A I+ G + K I
Sbjct: 425 VFQCFVFGPKKSGKSALLDSFLGRKFSNSYKATMGERYAANVIDQPGGSKKTLI 478
>At5g64813.1 68418.m08152 GTP-binding protein-related contains weak
similarity to Ras-related protein Rab-27A (Rab-27)
(GTP-binding protein Ram) (Swiss-Prot:P51159) [Homo
sapiens]
Length = 342
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSI 215
+V+++GDSGVGK+SL+ + + TIG + I
Sbjct: 24 RVLVVGDSGVGKTSLVHLINKGSSIVRPPQTIGCTVGVKHI 64
>At3g12080.1 68416.m01504 GTP-binding family protein contains Pfam
domain, PF01926: GTPase of unknown function
Length = 663
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLES 176
E+E +Y+ + +IG VGKSS+L+ R + + S
Sbjct: 362 EEEENYIPAIAIIGRPNVGKSSILNALVREDRTIVS 397
>At2g24060.1 68415.m02874 translation initiation factor 3 (IF-3)
family protein similar to SP|P33319 Translation
initiation factor IF-3 {Proteus vulgaris}; contains Pfam
profiles PF00707: Translation initiation factor IF-3,
C-terminal domain, PF05198: Translation initiation
factor IF-3, N-terminal domain
Length = 312
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 319 LVYDIAKHLSYENVERWLRELRDHADQNILIMLVGNKSDLRHLRSIPTEEAKAFAE 486
+ ++ + E E E ++ D+N+ I+LV NK +R + PT + K AE
Sbjct: 216 IAIELLRRFQTEIGELATEESKNFRDRNMFIILVPNKEMIRKPQEPPTRKKKKTAE 271
>At1g20050.1 68414.m02510 C-8,7 sterol isomerase identical to C-8,7
sterol isomerase GI:11279073 from [Arabidopsis thaliana]
(Plant Mol. Biol. 38 (5), 807-815 (1998))
Length = 223
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 290 AYYRGAWARCWFTTSPSTCRTRTWSGGCASCATTPTRTSSSCWSATR 430
+YY GA CW+ PS R W CA+ A + TR
Sbjct: 179 SYYIGA--NCWWVLIPSLISFRCWKKICAAAAIANNNVETKTKKKTR 223
>At2g41880.1 68415.m05179 guanylate kinase 1 (GK-1) identical to
guanylate kinase (GK-1) [Arabidopsis thaliana]
gi|7861795|gb|AAF70408
Length = 387
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGVEFATRSIEVDG 227
+V+ G SGVGK +L+S + ++ S + RS+E+DG
Sbjct: 140 IVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRSPRSMEMDG 183
>At5g29070.1 68418.m03617 expressed protein
Length = 307
Score = 28.7 bits (61), Expect = 3.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 308 WARCWFTTSPSTCRTRTWSGGCASCATTPTRTSSSCWSAT 427
WA TT P + T +G C+ A P S WS T
Sbjct: 114 WATQGATTGPESSPTCRPTGSCSVAAPQPQNFGRSTWSMT 153
>At2g16640.1 68415.m01910 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1206
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +3
Query: 69 EDEYDYLFKVVLIGDSGVGKSSLLS------RFTRNEFNLESKSTIGVEFATRSIEV 221
+D D+ ++++G SGVGKS+ ++ +F + F + +K VE + I+V
Sbjct: 568 QDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKV 624
>At1g02440.1 68414.m00192 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor GB:AAA32729 GI:166586 from
(Arabidopsis thaliana)
Length = 190
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 93 KVVLIGDSGVGKSSLLSRFTRNEFNLESKSTIGV 194
++VL G G GKSS++ +F E + T+G+
Sbjct: 19 RIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGL 52
>At5g25210.1 68418.m02989 expressed protein
Length = 175
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 311 ARCWFTTSPSTCRTRT---WSGGCASCATTPTRTSSSCWSATRAISGI 445
+RC S S C T WSGGC +++P+ + +R IS +
Sbjct: 48 SRCPRKESESRCSPSTPLSWSGGCGGSSSSPSGYVDGYEATSRQISAV 95
>At3g06650.1 68416.m00774 ATP-citrate synthase, putative /
ATP-citrate (pro-S-)-lyase, putative / citrate cleavage
enzyme, putative strong similarity to ATP:citrate lyase
[Capsicum annuum] GI:13160653; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 608
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/101 (21%), Positives = 44/101 (43%)
Frame = -1
Query: 516 PTSDKTKSVGFRERFRLLRRDGPKMPEIALVADQHDEDVLVGVVAQLAQPPLHVLVRQVL 337
PTS + V +E F L +G P + Q ED+ + + + P H++ +
Sbjct: 300 PTSFEALEVAIKETFDKLVEEGKVSPIKEVTPPQIPEDLSSAIKSGKVRAPTHII--STI 357
Query: 336 GDVVNQQRAHAPR*YADVMARYRSWPAGPISELLWSYRRPL 214
D ++ +A + ++ + + G + LLW ++R L
Sbjct: 358 SDDRGEEPCYAGVPMSSIIE--QGYGVGDVISLLW-FKRSL 395
>At5g57370.1 68418.m07168 expressed protein low similarity to
nucleic acid binding protein [Homo sapiens] GI:431953
Length = 219
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 194 GIRNKKYRGRR*DHKSSDMGPAGQERYRA 280
G+RNKK R R DH + ERYR+
Sbjct: 47 GLRNKKSRSRTPDHHARARHVRSPERYRS 75
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 314 RCWFTTSPSTCRTRTWSGGCASCATTPTRTSSSCWSATR 430
R T+S +T TR+WS +S T +R + + ATR
Sbjct: 124 RATLTSSSTTSSTRSWSRPSSSSGTGTSRVTLTAARATR 162
>At4g13030.2 68417.m02034 expressed protein
Length = 479
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTR 155
++L+G G GKSSL+++ TR
Sbjct: 107 IMLVGPKGAGKSSLVNKITR 126
>At4g13030.1 68417.m02033 expressed protein
Length = 481
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 96 VVLIGDSGVGKSSLLSRFTR 155
++L+G G GKSSL+++ TR
Sbjct: 109 IMLVGPKGAGKSSLVNKITR 128
>At5g49460.1 68418.m06119 ATP-citrate synthase, putative /
ATP-citrate (pro-S-)-lyase, putative / citrate cleavage
enzyme, putative strong similarity to ATP:citrate lyase
[Capsicum annuum] GI:13160653; contains Pfam profiles
PF00549: CoA-ligase, PF02629: CoA binding domain
Length = 608
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/101 (20%), Positives = 44/101 (43%)
Frame = -1
Query: 516 PTSDKTKSVGFRERFRLLRRDGPKMPEIALVADQHDEDVLVGVVAQLAQPPLHVLVRQVL 337
PTS + +E F L +G P ++ Q ED+ + + + P H++ +
Sbjct: 300 PTSFEALESAIKETFEKLVEEGKVSPIKEVIPPQIPEDLNSAIKSGKVRAPTHII--STI 357
Query: 336 GDVVNQQRAHAPR*YADVMARYRSWPAGPISELLWSYRRPL 214
D ++ +A + ++ + + G + LLW ++R L
Sbjct: 358 SDDRGEEPCYAGVPMSSIIE--QGYGVGDVISLLW-FKRSL 395
>At5g43240.1 68418.m05284 hypothetical protein contains Pfam profile
PF05056: Protein of unknown function (DUF674)
Length = 512
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -3
Query: 178 LDSKLNSFLVKRDRRLL--LPTPESPMSTTL--NK*SYSSSLVPILVYPELCSRRQKS 17
LD K++ ++ LL L T ++P++ T K SYS+ + L P LC R++S
Sbjct: 208 LDEKIHDVNLEEVPTLLECLSTSDNPLTDTFLKKKSSYSTKRIQKLPSPGLCEDREES 265
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 530 QRRAGLPEHSEPRSTGFVSQ---RQMRDPPXGERHPARRRSPP 649
+RR+ P + R + S+ R+ R P R P+R RSPP
Sbjct: 582 RRRSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSPSRSRSPP 624
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,599,326
Number of Sequences: 28952
Number of extensions: 279909
Number of successful extensions: 1249
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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