Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060796.seq
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical p... 78 6e-15
Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z69663-4|CAA93508.1| 287|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81494-14|CAJ43905.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +1
Query: 256 FSLLHRVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLP 435
F +L+R+F +E +E LK+ AL G ++ ++QAFLVYA ++NSGNYKGFGDTK +P +
Sbjct: 100 FYVLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVE 159
Query: 436 AESLELILKAS 468
+ +L+ S
Sbjct: 160 QTKIRALLEKS 170
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +2
Query: 83 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPES 247
D+S +++PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES
Sbjct: 42 DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPES 96
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 501 KVMQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTR 611
K ++ + I L LG +KGVT Y SSN T+
Sbjct: 180 KTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTK 216
>Z81494-8|CAB54212.3| 707|Caenorhabditis elegans Hypothetical
protein F02E9.9a protein.
Length = 707
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +1
Query: 256 FSLLHRVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLP 435
F +L+R+F +E +E LK+ AL G ++ ++QAFLVYA ++NSGNYKGFGDTK +P +
Sbjct: 62 FYVLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVE 121
Query: 436 AESLELILKAS 468
+ +L+ S
Sbjct: 122 QTKIRALLEKS 132
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +2
Query: 83 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPES 247
D+S +++PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES
Sbjct: 4 DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPES 58
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 501 KVMQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTR 611
K ++ + I L LG +KGVT Y SSN T+
Sbjct: 142 KTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTK 178
>Z81057-7|CAJ43903.2| 745|Caenorhabditis elegans Hypothetical
protein F02E9.9b protein.
Length = 745
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/71 (46%), Positives = 50/71 (70%)
Frame = +1
Query: 256 FSLLHRVFVAEPLENLKQSALKSGVSEDDFQAFLVYAGGLFANSGNYKGFGDTKFIPNLP 435
F +L+R+F +E +E LK+ AL G ++ ++QAFLVYA ++NSGNYKGFGDTK +P +
Sbjct: 100 FYVLYRLFKSESVEQLKEKALSVGFTDAEWQAFLVYAAAFYSNSGNYKGFGDTKIVPGVE 159
Query: 436 AESLELILKAS 468
+ +L+ S
Sbjct: 160 QTKIRALLEKS 170
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/55 (41%), Positives = 39/55 (70%)
Frame = +2
Query: 83 DKSNFLLPNNQRFVELDSSQAFDNLTTNEKLYAHYLSQAAWNGGLIVLVQTSPES 247
D+S +++PN +LD++ AF L+ EK Y+HY+++A+++G L V +Q SPES
Sbjct: 42 DRSLYIIPNETPVCQLDAADAFKTLSEKEKKYSHYVAKASFDGALAVFLQVSPES 96
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 501 KVMQNTKNAIYGLAPRLTSLGLANKGVTTYFSSNCTR 611
K ++ + I L LG +KGVT Y SSN T+
Sbjct: 180 KTWESVEKVIGSLESNELQLGFGDKGVTCYHSSNVTK 216
>Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical
protein AC3.7 protein.
Length = 529
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 391 NYKGFGDTKFIPNLPAESLELILKASKAYENDNT 492
NY+ FG + N E L+ L SKA N+N+
Sbjct: 55 NYEHFGKIRMAKNTNVEILDYHLDESKAVSNENS 88
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 610 RVQLLEKYVVTPLLAKPRLVNLGASP*MAFLVF 512
+++ L + V TPLL R VNLG P L++
Sbjct: 185 QIEKLREVVETPLLHPERYVNLGIEPPKGVLLY 217
>Z69663-4|CAA93508.1| 287|Caenorhabditis elegans Hypothetical
protein K02B9.3a protein.
Length = 287
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 388 GNYKGFGDTKFIPNLPAESLELILKASKAYENDNTHILKLCKILKMPFM 534
GN++ F + F PN + +L ++L+ S N H + +I+ + FM
Sbjct: 68 GNFEWFEEVVFAPNFHSSALNILLRVS----NFLFHAISTLQIIVISFM 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,895,304
Number of Sequences: 27780
Number of extensions: 308563
Number of successful extensions: 798
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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