Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060794.seq
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CD1B7 Cluster: glutamine amidotransferase class...    38   0.20 
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    36   0.61 
UniRef50_Q4Z1H5 Cluster: Putative uncharacterized protein; n=2; ...    33   7.5  
UniRef50_Q5UQ79 Cluster: Uncharacterized protein L516; n=1; Acan...    32   9.9  

>UniRef50_UPI00006CD1B7 Cluster: glutamine amidotransferase class-I
           family protein; n=1; Tetrahymena thermophila SB210|Rep:
           glutamine amidotransferase class-I family protein -
           Tetrahymena thermophila SB210
          Length = 1447

 Score = 37.9 bits (84), Expect = 0.20
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -3

Query: 167 IEIYIKCF*KKFNYGLYFILSKISDISYFSHFFYCLWRRTGI 42
           ++I+IK   K    GL  +L  I  + YF+H F CLW   GI
Sbjct: 410 VDIFIKANTKSSESGLISLLYLILQLLYFAHLFSCLWNAIGI 451


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep:
          Like moricin - Manduca sexta (Tobacco hawkmoth)
          (Tobacco hornworm)
          Length = 248

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +3

Query: 9  GDGNHSPSGGPYARPPPKAIKKM 77
          GDGNHSPSG PYA  P +A  K+
Sbjct: 2  GDGNHSPSGRPYASLPTRAKMKL 24


>UniRef50_Q4Z1H5 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 647

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
 Frame = -1

Query: 631 INKFEKIIIPKSLNYNIH----IGSN*E*KSLYI---QTKMSEXINNYNKRYTDYARVYF 473
           IN+ E+II     NY+      I SN   + LY    +   +  INN N    +   +Y 
Sbjct: 215 INEHEEIIKDLKKNYSFEKFYSIYSNKFFEDLYFLLNEIIFAYMINNINININEIVNIYI 274

Query: 472 KVACVYFNVGNITCFNNKIKVIHV-NKL 392
            +  +YFN  NI  ++ + ++ H+ NKL
Sbjct: 275 YLLNIYFNYINIKEYDYEYQITHISNKL 302


>UniRef50_Q5UQ79 Cluster: Uncharacterized protein L516; n=1;
           Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
           protein L516 - Mimivirus
          Length = 650

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = -1

Query: 595 LNYNIHIGSN*E*KSLYIQTKMSEXINNYNKRYTDYARVYFKVACVYFNVGNITCFNNKI 416
           ++Y   I  N   K   +  K+ + +NN NK + D  + YFK++ + F++   T   N+ 
Sbjct: 95  IDYYYRIEVNKYGKQTDLFDKLLQSVNNSNKDFFDKYKNYFKISGIDFDLNINTSNTNRF 154

Query: 415 KVI 407
           ++I
Sbjct: 155 EII 157


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 577,672,289
Number of Sequences: 1657284
Number of extensions: 10538536
Number of successful extensions: 23295
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23290
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)