Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060794.seq
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457161-1|CAG33442.1| 599|Homo sapiens SCMH1 protein. 30 7.8
BC021252-1|AAH21252.1| 599|Homo sapiens SCMH1 protein protein. 30 7.8
BC009752-1|AAH09752.1| 660|Homo sapiens sex comb on midleg homo... 30 7.8
AL606484-1|CAH72242.1| 648|Homo sapiens sex comb on midleg homo... 30 7.8
AL391730-7|CAH72796.1| 577|Homo sapiens sex comb on midleg homo... 30 7.8
AL391730-6|CAH72795.1| 599|Homo sapiens sex comb on midleg homo... 30 7.8
AL391730-5|CAH72794.1| 648|Homo sapiens sex comb on midleg homo... 30 7.8
AL391730-4|CAH72793.1| 660|Homo sapiens sex comb on midleg homo... 30 7.8
AL391730-2|CAH72791.1| 591|Homo sapiens sex comb on midleg homo... 30 7.8
AL110502-5|CAI22112.1| 577|Homo sapiens sex comb on midleg homo... 30 7.8
AL110502-4|CAI22113.1| 599|Homo sapiens sex comb on midleg homo... 30 7.8
AL110502-3|CAI22111.1| 648|Homo sapiens sex comb on midleg homo... 30 7.8
AL110502-2|CAI22110.1| 660|Homo sapiens sex comb on midleg homo... 30 7.8
AL110502-1|CAI22109.1| 591|Homo sapiens sex comb on midleg homo... 30 7.8
AF149046-1|AAF01151.1| 577|Homo sapiens Sex comb on midleg homo... 30 7.8
AF149045-1|AAF01150.1| 591|Homo sapiens Sex comb on midleg homo... 30 7.8
>CR457161-1|CAG33442.1| 599|Homo sapiens SCMH1 protein.
Length = 599
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>BC021252-1|AAH21252.1| 599|Homo sapiens SCMH1 protein protein.
Length = 599
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>BC009752-1|AAH09752.1| 660|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 660
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 411 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 452
>AL606484-1|CAH72242.1| 648|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 648
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 421 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 462
>AL391730-7|CAH72796.1| 577|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 577
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>AL391730-6|CAH72795.1| 599|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 599
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>AL391730-5|CAH72794.1| 648|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 648
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 421 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 462
>AL391730-4|CAH72793.1| 660|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 660
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 411 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 452
>AL391730-2|CAH72791.1| 591|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 591
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 364 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 405
>AL110502-5|CAI22112.1| 577|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 577
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>AL110502-4|CAI22113.1| 599|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 599
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>AL110502-3|CAI22111.1| 648|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 648
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 421 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 462
>AL110502-2|CAI22110.1| 660|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 660
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 411 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 452
>AL110502-1|CAI22109.1| 591|Homo sapiens sex comb on midleg homolog
1 (Drosophila) protein.
Length = 591
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 364 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 405
>AF149046-1|AAF01151.1| 577|Homo sapiens Sex comb on midleg homolog
1 isoform 2 protein.
Length = 577
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 350 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 391
>AF149045-1|AAF01150.1| 591|Homo sapiens Sex comb on midleg homolog
1 isoform 1 protein.
Length = 591
Score = 29.9 bits (64), Expect = 7.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 226 VYFLLKEPHGRLVPSSNINRSKYTLNVFKKNLITVFISFFLK 101
V+ LK+ HG V S+ +R ++TLN+ N IT + F K
Sbjct: 364 VFSFLKQGHGGEVISAVFDREQHTLNLPAVNSITYVLRFLEK 405
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,695,737
Number of Sequences: 237096
Number of extensions: 1523845
Number of successful extensions: 2528
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2528
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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