Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060793.seq
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK025589-1|BAB15181.1| 818|Homo sapiens protein ( Homo sapiens ... 31 3.6
BC112080-1|AAI12081.1| 593|Homo sapiens GATA zinc finger domain... 31 4.7
BC112052-1|AAI12053.1| 593|Homo sapiens GATA zinc finger domain... 31 4.7
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 4.7
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 4.7
BC069419-1|AAH69419.1| 593|Homo sapiens GATA zinc finger domain... 31 4.7
AL513523-12|CAH71425.1| 593|Homo sapiens GATA zinc finger domai... 31 4.7
AF411836-1|AAL39080.1| 593|Homo sapiens transcription repressor... 31 4.7
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 4.7
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 4.7
AB032976-1|BAA86464.1| 499|Homo sapiens KIAA1150 protein protein. 31 4.7
AK131105-1|BAC85155.1| 638|Homo sapiens FLJ00362 protein protein. 30 8.2
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 30 8.2
>AK025589-1|BAB15181.1| 818|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21936 fis, clone HEP04408. ).
Length = 818
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +2
Query: 332 NPQSDLTNNDDNEISDTNNNLILDE----YLKANIMPMYPLPMKY 454
+P D + DN++SDT++N LD Y KA I P+ P K+
Sbjct: 8 SPVMDHSREKDNDLSDTDSNYSLDSLSCVYAKALIEPLKPEERKW 52
>BC112080-1|AAI12081.1| 593|Homo sapiens GATA zinc finger domain
containing 2B protein.
Length = 593
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 302 RAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMY 436
R EP R L P D+ DNE S ++ ++E LKA + M+
Sbjct: 110 RRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMF 154
>BC112052-1|AAI12053.1| 593|Homo sapiens GATA zinc finger domain
containing 2B protein.
Length = 593
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 302 RAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMY 436
R EP R L P D+ DNE S ++ ++E LKA + M+
Sbjct: 110 RRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMF 154
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 72 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 203
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 72 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 203
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC069419-1|AAH69419.1| 593|Homo sapiens GATA zinc finger domain
containing 2B protein.
Length = 593
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 302 RAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMY 436
R EP R L P D+ DNE S ++ ++E LKA + M+
Sbjct: 110 RRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMF 154
>AL513523-12|CAH71425.1| 593|Homo sapiens GATA zinc finger domain
containing 2B protein.
Length = 593
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 302 RAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMY 436
R EP R L P D+ DNE S ++ ++E LKA + M+
Sbjct: 110 RRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMF 154
>AF411836-1|AAL39080.1| 593|Homo sapiens transcription repressor
p66 protein.
Length = 593
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 302 RAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMY 436
R EP R L P D+ DNE S ++ ++E LKA + M+
Sbjct: 110 RRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMF 154
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 72 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 203
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 72 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 203
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AB032976-1|BAA86464.1| 499|Homo sapiens KIAA1150 protein protein.
Length = 499
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 302 RAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMY 436
R EP R L P D+ DNE S ++ ++E LKA + M+
Sbjct: 16 RRSEPERGRLTPSPDIIVLSDNEASSPRSSSRMEERLKAANLEMF 60
>AK131105-1|BAC85155.1| 638|Homo sapiens FLJ00362 protein protein.
Length = 638
Score = 29.9 bits (64), Expect = 8.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 277 CTGLSASLSVCCGRPSCGYGYEPARHLHVHPSPEFSR 167
C+ ASLS+C R + + + PA +VHP+ +F R
Sbjct: 145 CSQFPASLSLCDLRRAQPHSFLPAAPPYVHPASQFLR 181
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 391 VVVCIRYFIIVIVCQ-IRLWVQKYTVRFMCSATARLVASCTGLSASLSVC-CGRPS 230
V +C+ ++ V VC + L + Y ++C V+ C + A LS+C C R S
Sbjct: 93 VFLCVCVYVSVSVCLCVYLHISVYLCVYVCICVCVSVSLCVSVCACLSLCVCIRVS 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,801,674
Number of Sequences: 237096
Number of extensions: 1971446
Number of successful extensions: 9931
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9931
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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