Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060793.seq
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.48
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.48
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.48
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.48
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 1.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 1.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 1.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 3.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 3.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 5.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.9
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 5.9
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 7.8
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 284 DQPRGRRAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP +++ + ++ +N++ + + NNN Y N + P+P+
Sbjct: 69 DRTERERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 284 DQPRGRRAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP +++ + ++ +N++ + + NNN Y N + P+P+
Sbjct: 69 DRTERERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 284 DQPRGRRAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP +++ + ++ +N++ + + NNN Y N + P+P+
Sbjct: 69 DRTERERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.4 bits (53), Expect = 0.48
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 284 DQPRGRRAHEPHRVLLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP +++ + ++ +N++ + + NNN Y N + P+P+
Sbjct: 69 DRTERERSREP-KIISSLSNNTIHNNNYKYNYNNNNYNKKLYYNINYIEQIPIPV 122
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 296 RAVGRVVHRTLCVALCLLWSSQLRIWVRTGATSPRTSL 183
R +G V +T ++ ++ S + W+ ATS R +L
Sbjct: 239 RNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVAL 276
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 341 SDLTNNDDNEISDTNNNLILDE--YLKANIMPMYPLPM 448
S L+NN + IS+ NNN ++ Y N + P+P+
Sbjct: 83 SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 120
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 341 SDLTNNDDNEISDTNNNLILDE--YLKANIMPMYPLPM 448
S L+NN + IS+ NNN ++ Y N + P+P+
Sbjct: 321 SSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPV 358
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 284 DQPRGRRAHEPHRV--LLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP + L N N+ N + NNN +Y N + P+P+
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 284 DQPRGRRAHEPHRV--LLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP + L N N+ N + NNN +Y N + P+P+
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 284 DQPRGRRAHEPHRV--LLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP + L N N+ N + NNN +Y N + P+P+
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 284 DQPRGRRAHEPHRV--LLNPQSDLTNNDDNEISDTNNNLILDEYLKANIMPMYPLPM 448
D+ R+ EP + L N N+ N + NNN +Y N + P+P+
Sbjct: 69 DRKERERSKEPKIISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPV 125
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 301 ATARLVASCTGLSASLSVCC 242
A A V SC G+ A+++V C
Sbjct: 516 AIAPAVISCLGIVATMAVAC 535
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 301 ATARLVASCTGLSASLSVCC 242
A A V SC G+ A+++V C
Sbjct: 606 AIAPAVISCLGIVATMAVAC 625
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 49 PDLSAASSGHFGLPRA 2
PDL+ S G GLP A
Sbjct: 336 PDLAGTSQGSAGLPSA 351
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 118 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 35
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +3
Query: 204 RAGSYPYPQLGRPQQTESDAESPVHDAT 287
+ GS P + R E E P HD T
Sbjct: 1062 KVGSGPMSEERRQHTAEGVPEQPPHDTT 1089
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +2
Query: 332 NPQSDLTNNDDNEISDTNNN 391
N ++ +NN++N ++ NNN
Sbjct: 232 NANTNASNNNNNNNNNNNNN 251
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 7.8
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 341 SDLTNNDDNEISDTN--NNLILDEYLKANIMPMYPLPM 448
S L+NN + IS+ N NN Y N + P+P+
Sbjct: 83 SSLSNNYISNISNYNNDNNYNKKLYYNINYIEQIPVPV 120
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,736
Number of Sequences: 438
Number of extensions: 4089
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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