Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060792.seq
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   3.1  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    22   7.2  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    22   9.5  

>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 153 RRVISSFSFPNTPKYD 106
           + ++S F FPN PK D
Sbjct: 12  KNLLSLFGFPNRPKID 27


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 315 TLSSXSSPNTYXVLTLAME 259
           TL + SSPN Y   T+A++
Sbjct: 160 TLCAASSPNAYTNTTIAVQ 178


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 121 IREAKRRYNTSHCDKL 168
           IREA ++Y  +HC  L
Sbjct: 199 IREATKQYVATHCPHL 214


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 293,862
Number of Sequences: 2352
Number of extensions: 4303
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)