Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060792.seq
         (398 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC075085-1|AAH75085.1|  503|Homo sapiens basic, immunoglobulin-l...    29   7.5  
BC075084-1|AAH75084.1|  503|Homo sapiens basic, immunoglobulin-l...    29   7.5  
BC051813-1|AAH51813.2|  437|Homo sapiens BIVM protein protein.         29   7.5  
AL157769-6|CAI14526.1|  503|Homo sapiens basic, immunoglobulin-l...    29   7.5  
AF411385-1|AAM45761.1|  503|Homo sapiens basic, immunoglobulin-l...    29   7.5  
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp...    29   7.5  

>BC075085-1|AAH75085.1|  503|Homo sapiens basic, immunoglobulin-like
           variable motif containing protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 246 VGARRSSQTRGRIQXQYPLCPRAAPLEFVAMRRVI 142
           V  R++S  +GR Q +   CP+ +PLE +  R+V+
Sbjct: 166 VSKRKTSDKKGRYQKE---CPQHSPLEDIKQRKVL 197


>BC075084-1|AAH75084.1|  503|Homo sapiens basic, immunoglobulin-like
           variable motif containing protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 246 VGARRSSQTRGRIQXQYPLCPRAAPLEFVAMRRVI 142
           V  R++S  +GR Q +   CP+ +PLE +  R+V+
Sbjct: 166 VSKRKTSDKKGRYQKE---CPQHSPLEDIKQRKVL 197


>BC051813-1|AAH51813.2|  437|Homo sapiens BIVM protein protein.
          Length = 437

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 246 VGARRSSQTRGRIQXQYPLCPRAAPLEFVAMRRVI 142
           V  R++S  +GR Q +   CP+ +PLE +  R+V+
Sbjct: 100 VSKRKTSDKKGRYQKE---CPQHSPLEDIKQRKVL 131


>AL157769-6|CAI14526.1|  503|Homo sapiens basic, immunoglobulin-like
           variable motif containing protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 246 VGARRSSQTRGRIQXQYPLCPRAAPLEFVAMRRVI 142
           V  R++S  +GR Q +   CP+ +PLE +  R+V+
Sbjct: 166 VSKRKTSDKKGRYQKE---CPQHSPLEDIKQRKVL 197


>AF411385-1|AAM45761.1|  503|Homo sapiens basic, immunoglobulin-like
           variable motif-containing protein protein.
          Length = 503

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 246 VGARRSSQTRGRIQXQYPLCPRAAPLEFVAMRRVI 142
           V  R++S  +GR Q +   CP+ +PLE +  R+V+
Sbjct: 166 VSKRKTSDKKGRYQKE---CPQHSPLEDIKQRKVL 197


>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
           complementing XP-G cells variant protein.
          Length = 1611

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -3

Query: 246 VGARRSSQTRGRIQXQYPLCPRAAPLEFVAMRRVI 142
           V  R++S  +GR Q +   CP+ +PLE +  R+V+
Sbjct: 137 VSKRKTSDKKGRYQKE---CPQHSPLEDIKQRKVL 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,308,133
Number of Sequences: 237096
Number of extensions: 498627
Number of successful extensions: 1056
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)