Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060791.seq
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   2.9  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    23   5.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    22   9.0  

>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 27  YFVKVHTYLHYFTFNRRHWNMSNLQKILR 113
           YF  +  YL+Y T      N  NLQ++++
Sbjct: 170 YFAGILDYLNYLTKTNLLENFPNLQEVVQ 198


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 27  YFVKVHTYLHYFTFNRRHWNMSNLQKIL 110
           YF  +  YL+Y T +    N  NLQ+++
Sbjct: 147 YFTAILDYLNYMTKSDLVANHPNLQRVV 174


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 372 GVDLXXMIDRSCSHAAYKEGLIVRVSSSIFS 280
           G  L   IDRS S    +EG +V++    F+
Sbjct: 864 GAMLRYYIDRSLSEGKTEEGALVKLDDYDFA 894


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,566
Number of Sequences: 2352
Number of extensions: 7261
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)