Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060791.seq
         (460 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121670-1|AAM51997.1|  563|Drosophila melanogaster RE14858p pro...    31   0.75 
AF245116-1|AAF66981.1|  743|Drosophila melanogaster cactin protein.    31   0.75 
AE014298-3022|AAF50904.2|  762|Drosophila melanogaster CG1676-PA...    31   0.75 

>AY121670-1|AAM51997.1|  563|Drosophila melanogaster RE14858p
           protein.
          Length = 563

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 21  PRYFVKVHTYLHYFTFNRRHWNMSN 95
           PRYF +VHT   +  +N+ H++M N
Sbjct: 448 PRYFNRVHTGFEWNKYNQTHYDMDN 472


>AF245116-1|AAF66981.1|  743|Drosophila melanogaster cactin protein.
          Length = 743

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 21  PRYFVKVHTYLHYFTFNRRHWNMSN 95
           PRYF +VHT   +  +N+ H++M N
Sbjct: 605 PRYFNRVHTGFEWNKYNQTHYDMDN 629


>AE014298-3022|AAF50904.2|  762|Drosophila melanogaster CG1676-PA
           protein.
          Length = 762

 Score = 31.1 bits (67), Expect = 0.75
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 21  PRYFVKVHTYLHYFTFNRRHWNMSN 95
           PRYF +VHT   +  +N+ H++M N
Sbjct: 647 PRYFNRVHTGFEWNKYNQTHYDMDN 671


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,979,116
Number of Sequences: 53049
Number of extensions: 265419
Number of successful extensions: 525
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)