Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060789.seq
(492 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 117 2e-25
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 113 2e-24
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 103 3e-21
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 90 3e-17
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 71 1e-11
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 70 3e-11
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 69 6e-11
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 69 6e-11
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 59 5e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 59 6e-08
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 58 8e-08
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 58 1e-07
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 57 2e-07
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 55 1e-06
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 52 5e-06
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 51 1e-05
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 50 4e-05
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 49 7e-05
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 48 2e-04
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.001
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 44 0.002
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 43 0.004
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 42 0.010
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 42 0.010
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 42 0.010
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 41 0.013
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 41 0.013
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 40 0.030
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 40 0.030
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 40 0.040
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.040
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 38 0.092
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 38 0.12
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 37 0.21
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 37 0.21
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 36 0.49
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 36 0.65
UniRef50_A0YSL9 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q8I2F2 Cluster: Putative uncharacterized protein PFI178... 34 2.0
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 34 2.0
UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;... 33 2.6
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 2.6
UniRef50_Q8YYM7 Cluster: Alr0821 protein; n=6; Cyanobacteria|Rep... 33 2.6
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 33 4.6
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 32 6.0
UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila melanogaster... 32 6.0
UniRef50_Q23K86 Cluster: NADH:ubiquinone oxidoreductase 17.2 kD ... 32 8.0
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 32 8.0
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 32 8.0
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 117 bits (281), Expect = 2e-25
Identities = 52/63 (82%), Positives = 60/63 (95%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 253 IAK 261
+ K
Sbjct: 61 MRK 63
Score = 112 bits (270), Expect = 4e-24
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK RKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 417 IAPLXVVXPAHNTGLG 464
IAP V PA NTGLG
Sbjct: 116 IAPCEVTVPAQNTGLG 131
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 113 bits (272), Expect = 2e-24
Identities = 50/63 (79%), Positives = 59/63 (93%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 253 IAK 261
+ K
Sbjct: 61 MRK 63
Score = 111 bits (267), Expect = 8e-24
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK RKAI+ HL+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGA 115
Query: 417 IAPLXVVXPAHNTGLG 464
IAP V PA NTGLG
Sbjct: 116 IAPCEVTVPAQNTGLG 131
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 103 bits (246), Expect = 3e-21
Identities = 45/76 (59%), Positives = 59/76 (77%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK RKA++ HL+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GA
Sbjct: 56 GKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGA 115
Query: 417 IAPLXVVXPAHNTGLG 464
IAP+ V PA NTGLG
Sbjct: 116 IAPVDVFVPASNTGLG 131
Score = 93.9 bits (223), Expect = 2e-18
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 253 IAK 261
I K
Sbjct: 61 IRK 63
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 89.8 bits (213), Expect = 3e-17
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK RKAIK+ + P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G
Sbjct: 63 GKNTLIRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGV 122
Query: 417 IAPLXVVXPAHNTGL 461
IAP V+ PA +TGL
Sbjct: 123 IAPNDVIVPAGDTGL 137
Score = 62.9 bits (146), Expect = 4e-09
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 253 IAKPSKTTWTTIQP 294
I K K T QP
Sbjct: 68 IRKAIKNQAET-QP 80
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 410
GK +++++ H +N N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 56 GKNTMMKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 115
Query: 411 GAIAPLXVVXPAHNTGL 461
G +AP+ VV NTGL
Sbjct: 116 GLVAPIDVVVQPGNTGL 132
Score = 70.1 bits (164), Expect = 2e-11
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 253 IAK 261
+ +
Sbjct: 61 MKR 63
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 69.7 bits (163), Expect = 3e-11
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 410
GK +++++ H D N A LLP ++GNVG +FT+GDL EV +++ + KV APAR
Sbjct: 57 GKNTMMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARV 116
Query: 411 GAIAPLXVVXPAHNTGL 461
G +AP+ VV NTGL
Sbjct: 117 GLVAPIDVVVQPGNTGL 133
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +1
Query: 88 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM+ +
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKR 64
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 68.9 bits (161), Expect = 6e-11
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +3
Query: 255 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 392
++AI+ HL+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 68.9 bits (161), Expect = 6e-11
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPG 413
GK R A+K +L P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G
Sbjct: 56 GKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLG 115
Query: 414 AIAPLXVVXPAHNTGL 461
IAP+ V P TG+
Sbjct: 116 VIAPIDVFIPPGPTGM 131
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/61 (47%), Positives = 36/61 (59%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 253 I 255
I
Sbjct: 61 I 61
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 243 KHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 422
KH+ R ++ NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A
Sbjct: 3 KHSIR--LRAEKTGNPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVA 60
Query: 423 PLXVVXPAHNTGL 461
+ V+ P NT L
Sbjct: 61 HIDVIVPPGNTXL 73
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 59.3 bits (137), Expect = 5e-08
Identities = 30/73 (41%), Positives = 44/73 (60%)
Frame = +3
Query: 243 KHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIA 422
KH+ R ++ NP L+P + GNVG +FT+GDL E +++ + KV APA G +A
Sbjct: 44 KHSIR--LRAEKTGNPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVA 101
Query: 423 PLXVVXPAHNTGL 461
+ V+ P NTGL
Sbjct: 102 HIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 58.8 bits (136), Expect = 6e-08
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 216 WLQYRAHGKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 395
WL R + H+ R + NP L+P + GNVG + T+GDL EV ++ + KV
Sbjct: 592 WLPKRLFSQ-HSSR--LHAEKTGNPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVG 648
Query: 396 APARPGAIAPLXVVXPAHNTGL 461
APAR G ++ + V+ P NTGL
Sbjct: 649 APARAGLVSHIDVIVPPGNTGL 670
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 58.4 bits (135), Expect = 8e-08
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +3
Query: 255 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXV 434
R A+++ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +
Sbjct: 74 RIALEEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDI 133
Query: 435 VXP 443
V P
Sbjct: 134 VVP 136
Score = 39.5 bits (88), Expect = 0.040
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 76 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 249
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 250 MI 255
++
Sbjct: 72 LM 73
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 58.0 bits (134), Expect = 1e-07
Identities = 33/74 (44%), Positives = 40/74 (54%)
Frame = -3
Query: 457 PVLWAGMTTXNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLLS 278
PVL A +GA AP AGA TL S V TKPTLPL GN+FS++G
Sbjct: 24 PVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVKTKPTLPLTKGNNFSKSGKSD 83
Query: 277 RWSLMALRSLCFFP 236
+ LMAL ++ F P
Sbjct: 84 KKPLMALLTMVFLP 97
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 56.8 bits (131), Expect = 2e-07
Identities = 28/75 (37%), Positives = 43/75 (57%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GKK RK I+D D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G
Sbjct: 55 GKKTMIRKVIRDLADSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGV 114
Query: 417 IAPLXVVXPAHNTGL 461
AP V+ PA TG+
Sbjct: 115 FAPNDVIIPAGPTGM 129
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +1
Query: 100 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TMI K
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRK 62
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 219 LQYRAHGKKHNDRKAIK-DHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQ 395
LQ + ++ D+KA D L N +EK L + GN +FT ++ + L +++VQ
Sbjct: 58 LQKKIVERRAEDKKASAYDKLLYNTCIEKKL--LCGNTALIFTNEEIPVITAVLDKHRVQ 115
Query: 396 APARPGAIAPLXVVXPAHNTGL 461
APAR GAIAP V+ PA NTG+
Sbjct: 116 APARVGAIAPCDVIVPAGNTGM 137
Score = 34.7 bits (76), Expect = 1.1
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 100 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ K
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKK 61
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +3
Query: 294 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VV P TG+
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGM 148
Score = 52.0 bits (119), Expect = 7e-06
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIVLMGKNT 249
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 250 MIAK 261
+ K
Sbjct: 61 LFKK 64
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1
Query: 100 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMI 255
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT+I
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLI 54
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 288 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP V TG+
Sbjct: 83 PELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYPGPTGM 140
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/62 (37%), Positives = 38/62 (61%)
Frame = +3
Query: 288 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGLGS 467
P +E L+ +KGN+G +FT DL +++D + + +APAR G++A V A TGL
Sbjct: 91 PHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGGTGLDP 150
Query: 468 RE 473
++
Sbjct: 151 KQ 152
Score = 48.4 bits (110), Expect = 9e-05
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 249
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 250 MI 255
+I
Sbjct: 61 LI 62
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 48.8 bits (111), Expect = 7e-05
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +1
Query: 85 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++ K
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRK 65
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 288 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
P L L+PH+K + +VF + ++ K+ V APAR G +A V+ P TG+
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGM 148
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 88 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT+I +
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKR 66
Score = 46.4 bits (105), Expect = 3e-04
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 258 KAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVV 437
K + + LD++ L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VV
Sbjct: 65 KRVINQLDDDK-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVV 123
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 255 RKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXV 434
+KA K+ P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P V
Sbjct: 65 KKAAKEL--GKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDV 122
Query: 435 VXPAHNTGL 461
V PA T L
Sbjct: 123 VVPAGPTPL 131
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 43.6 bits (98), Expect = 0.002
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK R+A+ + P + +L H+ G +FT G+ ++D + N + + A+ GA
Sbjct: 58 GKNSLMRRAVDQLKEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGA 117
Query: 417 IAPLXVVXPAHNTGLGSRE 473
IAP V+ T + +
Sbjct: 118 IAPCDVILQPQRTSMSPND 136
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 258 KAIKDHLDNN--PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLX 431
K + L+N+ P ++ ++ KG V +FT ++ L +NK+ AR G IA +
Sbjct: 61 KVAQKALENSDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVD 120
Query: 432 VVXPAHNTGL 461
VV PA NTG+
Sbjct: 121 VVVPAKNTGI 130
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 41.5 bits (93), Expect = 0.010
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK +K ++D L N+ ++L I GNV F+FT D +++ L N + A+ G
Sbjct: 55 GKNTLIKKVLRDRLKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQ 114
Query: 417 IA 422
+A
Sbjct: 115 VA 116
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 41.5 bits (93), Expect = 0.010
Identities = 29/67 (43%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -3
Query: 457 PVLWAGMTTXNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAG--L 284
PVL G T A P RAGA TL+ + S TS +SP V PTLP G + G +
Sbjct: 17 PVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRRGTRLRKTGFPV 76
Query: 283 LSRWSLM 263
S SLM
Sbjct: 77 FSARSLM 83
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 41.5 bits (93), Expect = 0.010
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 243 KHNDRKAIKDHLDNNPA--LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
K + + IK L+N+ +E L +++G VFT+ + ++ L ++K +APA+ G+
Sbjct: 52 KMSRKNFIKIALENSDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGS 111
Query: 417 IAPLXVVXPAHNT 455
IAP +V PA +T
Sbjct: 112 IAPADIVVPAGDT 124
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 41.1 bits (92), Expect = 0.013
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 97 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+MIA+
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIAR 65
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 41.1 bits (92), Expect = 0.013
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 82 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 294 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
L+ L +++G VG V T + + +L +K AP G +AP +V P +TG+
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGI 133
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 39.9 bits (89), Expect = 0.030
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +1
Query: 118 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIA 258
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + ++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLS 57
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 39.9 bits (89), Expect = 0.030
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +3
Query: 288 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
P ++K++ + G F+FT + L +NK AR G IA + V PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGI 116
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 39.5 bits (88), Expect = 0.040
Identities = 19/76 (25%), Positives = 41/76 (53%)
Frame = +1
Query: 28 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 207
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 208 SLRGSSIVLMGKNTMI 255
S++G + + MGKN ++
Sbjct: 69 SMKGYARIFMGKNQLM 84
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 39.5 bits (88), Expect = 0.040
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +3
Query: 315 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNT 455
++G VGF FT + EV + EN V+ A+PG AP +V PA T
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPT 136
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 38.3 bits (85), Expect = 0.092
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 285 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
N +EK ++ G GF+FT + ++ +++N V+ A+PG + ++ PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGI 141
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -2
Query: 425 WGNGTRTSWSLDFVLQQFVTDLNEVSAGEHEANVALDVWQQFLEGWIV 282
WGN T + WS + V D+ + GE E NV LD QQ W V
Sbjct: 209 WGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQLFVVWEV 256
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 37.1 bits (82), Expect = 0.21
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 97 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMI 255
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT+I
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLI 63
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 37.1 bits (82), Expect = 0.21
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +3
Query: 294 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
+E + H++G +FT + E+ L + K+ AR G IA +V PA NTG+
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGI 135
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 35.9 bits (79), Expect = 0.49
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 321 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
G+ F+FT + ++ K+ + + APA+PG +A +V PA +TGL
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGL 139
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 35.5 bits (78), Expect = 0.65
Identities = 24/75 (32%), Positives = 39/75 (52%)
Frame = +3
Query: 237 GKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 416
GK R+AI D P L + +KG+V FVF +G+ +++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 417 IAPLXVVXPAHNTGL 461
+A V + TG+
Sbjct: 138 VAQRDVWVESCITGM 152
Score = 35.1 bits (77), Expect = 0.86
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 73 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 252
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 253 IAK 261
I +
Sbjct: 85 IRR 87
>UniRef50_A0YSL9 Cluster: Putative uncharacterized protein; n=1;
Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
protein - Lyngbya sp. PCC 8106
Length = 1122
Score = 34.7 bits (76), Expect = 1.1
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 193 QQIRISLRGSSIVLMGKNTMIAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVT 372
QQ R + G I+++G TM PS+T + Q + T L+ AET R +
Sbjct: 857 QQQRQKVSGQDILIVGNPTMPTVPSQTNLSAEQITAQLSDTRSEQLSDLPGAETEAREIA 916
Query: 373 NCWRTKSKLQ 402
++T+ L+
Sbjct: 917 RIFQTEPLLK 926
>UniRef50_Q8I2F2 Cluster: Putative uncharacterized protein PFI1780w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI1780w - Plasmodium falciparum
(isolate 3D7)
Length = 383
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 222 QYRAHGKKHNDRKAIKDH-LDNNPALEKLL-PHIKGNVGFVFTRGDLVEVRDKLLENKVQ 395
++R HG+ N ++ +K H LD EK+L H +G +F +G L EV + ++ K +
Sbjct: 228 EFREHGEMLNQKRKLKQHELDRRAQREKMLEEHSRG----IFAKGYLGEVESETIKKKTE 283
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 33.9 bits (74), Expect = 2.0
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 285 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLXVVXPAHNTGL 461
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGM 136
>UniRef50_UPI00015B4FCF Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 170
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +1
Query: 256 AKPSKTTWTTIQPSRNCCHTSRATLASCSP---AETSLRSVTNCWRTKS 393
A T WTT + T+ AT A+ + A ++ ++TN WRTKS
Sbjct: 102 ASTISTRWTTTAATTTTTATTAATTAAAATSTSASNAISTITNAWRTKS 150
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.5 bits (73), Expect = 2.6
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 273 HLDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 368
+L NN L+KLLP I+G ++ RGDL E++
Sbjct: 831 NLANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_Q8YYM7 Cluster: Alr0821 protein; n=6; Cyanobacteria|Rep:
Alr0821 protein - Anabaena sp. (strain PCC 7120)
Length = 140
Score = 33.5 bits (73), Expect = 2.6
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +3
Query: 192 AADPYLATWLQYRAHGKKHNDRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRD 371
A+DP + WL K + K +K++L + P+LE I+ G +++ G++
Sbjct: 42 ASDPEIKPWLYELVAVKPNECYKWVKEYLGDRPSLEDCEHLIEAISGLIYSDGEVAIEEA 101
Query: 372 KLLENKVQAPAR 407
KLL K+Q A+
Sbjct: 102 KLL-TKLQDLAK 112
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 32.7 bits (71), Expect = 4.6
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 37 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 216
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 217 GSSIVLMGKNTMIAK 261
G+ GK ++AK
Sbjct: 63 GTGRFFFGKGKVMAK 77
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 127 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIVLMGKNTMI 255
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVL 210
>UniRef50_Q9VQB9 Cluster: CG3557-PA; n=1; Drosophila
melanogaster|Rep: CG3557-PA - Drosophila melanogaster
(Fruit fly)
Length = 271
Score = 32.3 bits (70), Expect = 6.0
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 244 NTMIAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKL 399
+T +KPS T +P+R CC + +A L CSP +T S C++T S+L
Sbjct: 100 STCCSKPS-TICCYPKPTR-CCASPKAPLVPCSPMDTPKSS---CFKTASRL 146
>UniRef50_Q23K86 Cluster: NADH:ubiquinone oxidoreductase 17.2 kD
subunit family protein; n=1; Tetrahymena thermophila
SB210|Rep: NADH:ubiquinone oxidoreductase 17.2 kD
subunit family protein - Tetrahymena thermophila SB210
Length = 1464
Score = 31.9 bits (69), Expect = 8.0
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +1
Query: 163 GADNVGSQQMQQIRISLRGSSIVLMGKNTMIAKPSKT-----TWTTI---QPSRNCCHTS 318
G N+ SQQ+ + IS SS + KN++I + KT + I Q S+N
Sbjct: 217 GKQNMKSQQITNVNISNLDSSAITSNKNSVIGQTGKTKNELNSLNNIVGQQTSKNLQSKQ 276
Query: 319 RATLASCSPAETSLRSVTNCWRTKSKLQLV-LVPL 420
+ L +L S+TN +K +L L PL
Sbjct: 277 NSALEISQSQSNNLESLTNAKTVNTKNKLTPLEPL 311
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 31.9 bits (69), Expect = 8.0
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 118 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMIAK 261
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLER 65
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 31.9 bits (69), Expect = 8.0
Identities = 19/80 (23%), Positives = 37/80 (46%)
Frame = +1
Query: 37 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 216
K R+ L+++ ++++ K F I + + Y CF+ DN+ + ++ +R L
Sbjct: 3 KSKRAKVYNLTQVTKKNREQ-KEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELN 61
Query: 217 GSSIVLMGKNTMIAKPSKTT 276
I GK + A+ TT
Sbjct: 62 DCRI-FFGKTKLTARALGTT 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,100,019
Number of Sequences: 1657284
Number of extensions: 10596367
Number of successful extensions: 32687
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 31690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32680
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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