Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060787.seq
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.41 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.2  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.1  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +3

Query: 423 EADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGNASGTSLPRIKF 572
           ++DV+ + KPG P +      P+ L  +  K +N    +      PR  F
Sbjct: 220 DSDVVNLSKPGTPPSGEPGNGPLDLSVSSRKRSNDDSVSQPPNRKPRTDF 269


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 411 AVWKEADVIGIHKPGKPNN 467
           AV++   ++G+H+PG  N+
Sbjct: 192 AVYEPVRIMGVHRPGFDND 210


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 305 GCLLRLKVIYYFSNFVRV 252
           GC+  LKVI  F N   V
Sbjct: 107 GCIFALKVIEVFKNIEEV 124


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 305 GCLLRLKVIYYFSNFVRV 252
           GC+  LKVI  F N   V
Sbjct: 107 GCIFALKVIEVFKNIEEV 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,562
Number of Sequences: 336
Number of extensions: 3015
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)