Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060787.seq
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein. 56 1e-07
U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein. 56 1e-07
U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein. 55 3e-07
U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein. 54 3e-07
U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein. 54 3e-07
U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein. 54 3e-07
U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein. 54 3e-07
U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein. 54 3e-07
AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein. 54 3e-07
AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein. 54 3e-07
AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein. 54 3e-07
M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposo... 54 4e-07
M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein. 54 4e-07
M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein. 54 4e-07
AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein. 54 6e-07
U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein. 53 8e-07
AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens ... 50 5e-06
U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein. 47 5e-05
AK022281-1|BAB14000.1| 124|Homo sapiens protein ( Homo sapiens ... 39 0.018
AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein. 38 0.031
BC051332-1|AAH51332.1| 622|Homo sapiens coagulation factor II (... 33 0.67
AB209775-1|BAD93012.1| 664|Homo sapiens sphingomyelin phosphodi... 32 2.1
BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein. 31 4.7
AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens ... 31 4.7
AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens ... 31 4.7
AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein. 31 4.7
>U93570-2|AAC51273.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 55.6 bits (128), Expect = 1e-07
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTDEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U93567-2|AAC51267.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 55.6 bits (128), Expect = 1e-07
Identities = 30/98 (30%), Positives = 48/98 (48%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTDEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U93574-2|AAC51279.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 54.8 bits (126), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U93572-2|AAC51276.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U93569-2|AAC51271.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U93565-1|AAC51264.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U93563-1|AAC51261.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>U09116-2|AAB60345.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>AF421375-1|AAL50637.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>AF149422-2|AAD38785.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>AF148856-2|AAD39215.1| 1275|Homo sapiens unknown protein.
Length = 1275
Score = 54.4 bits (125), Expect = 3e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>M80343-2|AAB59368.1| 1275|Homo sapiens protein ( Human transposon
L1.2. ).
Length = 1275
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>M80340-1|AAA51622.1| 1275|Homo sapiens ORF2 protein.
Length = 1275
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>M22333-1|AAA88037.1| 1192|Homo sapiens unknown protein protein.
Length = 1192
Score = 54.0 bits (124), Expect = 4e-07
Identities = 30/98 (30%), Positives = 47/98 (47%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+PG DG + +L+ L + + I P + E
Sbjct: 369 PITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEKEGILPNSFYE 428
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 429 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 466
>AF194537-1|AAG27485.1| 420|Homo sapiens NAG13 protein.
Length = 420
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/93 (31%), Positives = 46/93 (49%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L KK+PG DG + +L+ L + + I P + EA +I
Sbjct: 106 EIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIIL 165
Query: 441 IHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
I KPG+ + ++RPISL+ AK N N
Sbjct: 166 IPKPGRDTTKKENFRPISLMNIDAKILNKILAN 198
>U93568-2|AAC51269.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 53.2 bits (122), Expect = 8e-07
Identities = 29/93 (31%), Positives = 46/93 (49%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L KK+PG DG + +L+ L + + I P + EA +I
Sbjct: 457 EIVAIINSLPTKKSPGPDGFTAEFYQRYMEELVPFLLKLFQSIEKEGILPNSFYEASIIL 516
Query: 441 IHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
I KPG+ + ++RPISL+ AK N N
Sbjct: 517 IPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>AK097143-1|BAC04963.1| 372|Homo sapiens protein ( Homo sapiens
cDNA FLJ39824 fis, clone SPLEN2011981. ).
Length = 372
Score = 50.4 bits (115), Expect = 5e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L KK+PG DG + +L+ L + + I P + E +I
Sbjct: 29 EIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSTEKEGILPNSFYEDSIIL 88
Query: 441 IHKPGKPNNETASYRPISLLPAMAKFTN 524
I KPG+ + ++RPISL+ AK N
Sbjct: 89 IPKPGRDTTKKDNFRPISLMNIDAKILN 116
>U93564-2|AAC51263.1| 1275|Homo sapiens putative p150 protein.
Length = 1275
Score = 47.2 bits (107), Expect = 5e-05
Identities = 28/98 (28%), Positives = 45/98 (45%)
Frame = +3
Query: 246 PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKE 425
P E+ +I++L KK+ G D + +L+ L + + I P + E
Sbjct: 452 PITGSEIVAIINSLPTKKSLGPDRFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYE 511
Query: 426 ADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGSFGN 539
A +I I KPG+ + ++RPISL+ AK N N
Sbjct: 512 ASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 549
>AK022281-1|BAB14000.1| 124|Homo sapiens protein ( Homo sapiens
cDNA FLJ12219 fis, clone MAMMA1001078. ).
Length = 124
Score = 38.7 bits (86), Expect = 0.018
Identities = 25/90 (27%), Positives = 39/90 (43%)
Frame = +3
Query: 255 SDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADV 434
S ++ VI+ L KK+P DG + +L+ + T+ + P A +
Sbjct: 27 SSKIEAVINILPIKKSPSPDGFTAEFYQRYKEKLVPFIPTLFQTTEKEELLPNSCYGAII 86
Query: 435 IGIHKPGKPNNETASYRPISLLPAMAKFTN 524
I I KPG ++R ISL+ AK N
Sbjct: 87 ILIPKPGIDTTRKENFRTISLMNIDAKILN 116
>AF003535-1|AAD04635.1| 573|Homo sapiens ORF2-like protein protein.
Length = 573
Score = 37.9 bits (84), Expect = 0.031
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 351 QLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETASYRPISLLPAMAKFTNGS 530
+L+ L + + I P + EA +I I KPG+ + ++RPISL+ AK N
Sbjct: 1 ELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKI 60
Query: 531 FGN 539
N
Sbjct: 61 LAN 63
>BC051332-1|AAH51332.1| 622|Homo sapiens coagulation factor II
(thrombin) protein.
Length = 622
Score = 33.5 bits (73), Expect = 0.67
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = -1
Query: 502 GRRLIGR*LAVSLFGLPGLCIPITSASFHTAGKMQCVIAAFRMVANIVXSWTGKSFNAWL 323
G++ GR LAV+ GLP C+ SA K Q +A ++V N + G AW
Sbjct: 218 GQQYQGR-LAVTTHGLP--CLAWASAQAKALSKHQDFNSAVQLVENFCRNPDGDEEGAWC 274
Query: 322 RMPSEPGAF 296
+ +PG F
Sbjct: 275 YVAGKPGDF 283
>AB209775-1|BAD93012.1| 664|Homo sapiens sphingomyelin
phosphodiesterase 1, acid lysosomal isoform 1 precursor
variant protein.
Length = 664
Score = 31.9 bits (69), Expect = 2.1
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +3
Query: 168 RGPRTHRGSRRGGRAQSFPATLGRVT-PHYSDEVREVIDNLQPKKAPGSDGIRNHALKLL 344
RGP GSR GG Q+ +G T P Y +R+ + + G DG A LL
Sbjct: 8 RGPEGWLGSRPGGTGQTNQPRVGSATMPRYGASLRQSCP--RSGREQGQDGTAG-APGLL 64
Query: 345 PVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKP 461
+ L LA L A+ +W A+ + G P
Sbjct: 65 WMGLALALALALALALALSDSRVLWAPAEAHPLSPQGHP 103
>BC040485-1|AAH40485.1| 435|Homo sapiens GRSF1 protein protein.
Length = 435
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 177 RTHRGSRRGGRAQSFPATLGRVTPHYSDEVREVIDNLQPKKA 302
RTH GS +G + SFP P E EV +++QP A
Sbjct: 330 RTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTA 371
>AK127161-1|BAC86863.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ45225 fis, clone BRCAN2020331, highly similar
to G-rich sequence factor-1. ).
Length = 447
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 177 RTHRGSRRGGRAQSFPATLGRVTPHYSDEVREVIDNLQPKKA 302
RTH GS +G + SFP P E EV +++QP A
Sbjct: 297 RTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTA 338
>AK090755-1|BAC03513.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ33436 fis, clone BRACE2021478, highly similar to
G-RICH SEQUENCE FACTOR-1. ).
Length = 415
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 177 RTHRGSRRGGRAQSFPATLGRVTPHYSDEVREVIDNLQPKKA 302
RTH GS +G + SFP P E EV +++QP A
Sbjct: 265 RTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTA 306
>AC021989-1|AAY40942.1| 435|Homo sapiens unknown protein.
Length = 435
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 177 RTHRGSRRGGRAQSFPATLGRVTPHYSDEVREVIDNLQPKKA 302
RTH GS +G + SFP P E EV +++QP A
Sbjct: 330 RTHVGSYKGKKIASFPTAKYITEPEMVFEEHEVNEDIQPMTA 371
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,906,188
Number of Sequences: 237096
Number of extensions: 1874139
Number of successful extensions: 5675
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5671
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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