Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060787.seq
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 86 3e-17
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 85 1e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 82 6e-16
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 82 7e-16
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 76 4e-14
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 74 1e-13
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 74 1e-13
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 73 3e-13
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 71 1e-12
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 71 1e-12
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 71 1e-12
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 71 1e-12
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 71 1e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 65 7e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 63 4e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 63 4e-10
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 63 4e-10
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 63 4e-10
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 63 4e-10
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 63 4e-10
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 60 3e-09
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 48 8e-06
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 48 1e-05
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 42 0.001
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 38 0.009
BT021469-1|AAX33617.1| 530|Drosophila melanogaster AT07710p pro... 31 1.4
AE014297-695|AAF54189.1| 530|Drosophila melanogaster CG7910-PA ... 31 1.4
AY051924-1|AAK93348.1| 678|Drosophila melanogaster LD40883p pro... 30 2.4
AE014297-3733|AAF56411.2| 678|Drosophila melanogaster CG11849-P... 30 2.4
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 86.2 bits (204), Expect = 3e-17
Identities = 43/92 (46%), Positives = 56/92 (60%)
Frame = +3
Query: 240 VTPHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVW 419
+ P +E+ E I +L KK+PG D + N LK LPV+ I LA I NA + FP W
Sbjct: 434 IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQW 493
Query: 420 KEADVIGIHKPGKPNNETASYRPISLLPAMAK 515
K A ++ IHKPGKP SYRPISLL +++K
Sbjct: 494 KMAAILMIHKPGKPEESPESYRPISLLSSLSK 525
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERL+ RL D +T +IL D QFGFR S V QVHRLT+HIL
Sbjct: 525 KLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHIL 570
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 84.6 bits (200), Expect = 1e-16
Identities = 45/92 (48%), Positives = 53/92 (57%)
Frame = +3
Query: 240 VTPHYSDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVW 419
+TP EV EVI KAPG D I N LK LP Q I + + NA + FP W
Sbjct: 433 ITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQW 492
Query: 420 KEADVIGIHKPGKPNNETASYRPISLLPAMAK 515
K + IHKPGKP E ASYRPISLLP+++K
Sbjct: 493 KLGIISMIHKPGKPEREPASYRPISLLPSISK 524
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERL+ R+ + A I + QFGFRA V Q+HR+ E IL
Sbjct: 524 KVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQIL 569
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 82.2 bits (194), Expect = 6e-16
Identities = 39/86 (45%), Positives = 52/86 (60%)
Frame = +3
Query: 258 DEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVI 437
+EV+ +I L KKAPG D + N ++LLP Q + L I N+ + FP WK A +I
Sbjct: 243 EEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASII 302
Query: 438 GIHKPGKPNNETASYRPISLLPAMAK 515
IHK GK + SYRPISLLP++ K
Sbjct: 303 MIHKTGKTPTDVDSYRPISLLPSLGK 328
Score = 34.3 bits (75), Expect = 0.15
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 509 GKIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
GKI ERL+ RL K + QFGFR + Q+HR+ L
Sbjct: 327 GKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 373
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 81.8 bits (193), Expect = 7e-16
Identities = 39/86 (45%), Positives = 52/86 (60%)
Frame = +3
Query: 258 DEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVI 437
+EV+ +I L KKAPG D + N ++LLP Q + LA I N+ + FP WK A +I
Sbjct: 441 EEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASII 500
Query: 438 GIHKPGKPNNETASYRPISLLPAMAK 515
IHK GK + SYRP SLLP++ K
Sbjct: 501 MIHKTGKTPTDVDSYRPTSLLPSLGK 526
Score = 34.3 bits (75), Expect = 0.15
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = +2
Query: 509 GKIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
GKI ERL+ RL K + QFGFR + Q+HR+ L
Sbjct: 525 GKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 571
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 76.2 bits (179), Expect = 4e-14
Identities = 39/86 (45%), Positives = 50/86 (58%)
Frame = +3
Query: 258 DEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVI 437
+E+ E I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 496 NELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVK 555
Query: 438 GIHKPGKPNNETASYRPISLLPAMAK 515
I KPGK +NE SYRPISLL ++K
Sbjct: 556 MILKPGKSSNEPKSYRPISLLSGLSK 581
Score = 37.1 bits (82), Expect = 0.021
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 581 KMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 626
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
EV ++ L +K+PG DGI N +LK LP I + I N + FP WK A ++
Sbjct: 465 EVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVP 524
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGKP + SYRPISLL ++K
Sbjct: 525 ILKPGKPPDNPESYRPISLLSGLSK 549
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 74.1 bits (174), Expect = 1e-13
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
EV ++ L +K+PG DGI N +LK LP I + I N + FP WK A ++
Sbjct: 413 EVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVP 472
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGKP + SYRPISLL ++K
Sbjct: 473 ILKPGKPPDNPESYRPISLLSGLSK 497
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 73.3 bits (172), Expect = 3e-13
Identities = 38/85 (44%), Positives = 48/85 (56%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ + I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 485 ELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKM 544
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK NE SYRPISLL ++K
Sbjct: 545 ILKPGKSANEPRSYRPISLLSGLSK 569
Score = 38.7 bits (86), Expect = 0.007
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
KI+ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 569 KIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFIL 614
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 71.3 bits (167), Expect = 1e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ + I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 369 ELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKM 428
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK N+ SYRPISLL ++K
Sbjct: 429 ILKPGKSVNDPKSYRPISLLSGLSK 453
Score = 37.1 bits (82), Expect = 0.021
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 453 KMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 498
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 71.3 bits (167), Expect = 1e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ + I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 485 ELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKM 544
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK N+ SYRPISLL ++K
Sbjct: 545 ILKPGKSVNDPKSYRPISLLSGLSK 569
Score = 37.1 bits (82), Expect = 0.021
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 569 KMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 614
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 71.3 bits (167), Expect = 1e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ + I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 485 ELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKM 544
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK N+ SYRPISLL ++K
Sbjct: 545 ILKPGKSVNDPKSYRPISLLSGLSK 569
Score = 37.1 bits (82), Expect = 0.021
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 569 KMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 614
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 71.3 bits (167), Expect = 1e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ + I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 447 ELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKM 506
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK N+ SYRPISLL ++K
Sbjct: 507 ILKPGKSVNDPKSYRPISLLSGLSK 531
Score = 37.1 bits (82), Expect = 0.021
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 531 KMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 576
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 71.3 bits (167), Expect = 1e-12
Identities = 37/85 (43%), Positives = 48/85 (56%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ + I NL+ KAPG D I N +K LP + L I N+ + +P WK A V
Sbjct: 485 ELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKM 544
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK N+ SYRPISLL ++K
Sbjct: 545 ILKPGKSVNDPKSYRPISLLSGLSK 569
Score = 37.1 bits (82), Expect = 0.021
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K++ERLL KRL+ K + QFGFR + +Q+ R+T+ IL
Sbjct: 569 KMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 614
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 65.3 bits (152), Expect = 7e-11
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 EVREVI-DNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVI 437
E+ ++I DNL PKK+PG D I + LP + + + NA FP WK +I
Sbjct: 437 EITKIIKDNLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKII 496
Query: 438 GIHKPGKPNNETASYRPISLLPAMAK 515
I KPGK + +SYRPISLL ++K
Sbjct: 497 MIPKPGKNHTVASSYRPISLLSCISK 522
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHI 646
K++E+ L RL T + I+ QFGFR + QV+R+T I
Sbjct: 522 KLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEI 566
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 EVREVI-DNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVI 437
E+ +VI + L P+K+PG D I L LP I + + NA FP WK++ ++
Sbjct: 435 ELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIV 494
Query: 438 GIHKPGKPNNETASYRPISLLPAMAK 515
I KPGK + +SYRPISLL ++K
Sbjct: 495 MIPKPGKDKTQPSSYRPISLLTCLSK 520
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHI 646
K++E++L R+ + N L QFGFR K + QV+R+T I
Sbjct: 520 KLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEI 564
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +3
Query: 261 EVREVI-DNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVI 437
E+ +VI + L P+K+PG D I L LP I + + NA FP WK++ ++
Sbjct: 435 ELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIV 494
Query: 438 GIHKPGKPNNETASYRPISLLPAMAK 515
I KPGK + +SYRPISLL ++K
Sbjct: 495 MIPKPGKDKTQPSSYRPISLLTCLSK 520
Score = 38.3 bits (85), Expect = 0.009
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHI 646
K++E++L R+ + N L QFGFR K + QV+R+T I
Sbjct: 520 KLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEI 564
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L+ KKAPG+D + N + LP + L I N + FP WK A +
Sbjct: 41 ELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISM 100
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK SYRPISLL ++K
Sbjct: 101 IPKPGKSPFALNSYRPISLLSGLSK 125
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K+ ER+L KRL+D + K + QFGFR Q+ R+T+ IL
Sbjct: 125 KLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 170
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L+ KKAPG+D + N + LP + L I N + FP WK A +
Sbjct: 488 ELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISM 547
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK SYRPISLL ++K
Sbjct: 548 IPKPGKSPFALNSYRPISLLSGLSK 572
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K+ ER+L KRL+D + K + QFGFR Q+ R+T+ IL
Sbjct: 572 KLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 617
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L+ KKAPG+D + N + LP + L I N + FP WK A +
Sbjct: 488 ELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISM 547
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK SYRPISLL ++K
Sbjct: 548 IPKPGKSPFALNSYRPISLLSGLSK 572
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K+ ER+L KRL+D + K + QFGFR Q+ R+T+ IL
Sbjct: 572 KLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 617
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 62.9 bits (146), Expect = 4e-10
Identities = 34/85 (40%), Positives = 47/85 (55%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
E+ +I++L+ KKAPG+D + N + LP + L I N + FP WK A +
Sbjct: 488 ELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISM 547
Query: 441 IHKPGKPNNETASYRPISLLPAMAK 515
I KPGK SYRPISLL ++K
Sbjct: 548 IPKPGKSPFALNSYRPISLLSGLSK 572
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRSCVRQVHRLTEHIL 649
K+ ER+L KRL+D + K + QFGFR Q+ R+T+ IL
Sbjct: 572 KLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 617
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 60.1 bits (139), Expect = 3e-09
Identities = 31/73 (42%), Positives = 41/73 (56%)
Frame = +3
Query: 297 KAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETA 476
K+PG+D + LK L L T L I N +T +P W+ A +I I KP KP ++
Sbjct: 452 KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDIN 511
Query: 477 SYRPISLLPAMAK 515
SYRPISLL + K
Sbjct: 512 SYRPISLLSCLGK 524
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 48.4 bits (110), Expect = 8e-06
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +3
Query: 261 EVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIG 440
EV + L+ +++PG DGI K + + LA++ + + FPA WK V+
Sbjct: 438 EVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVS 497
Query: 441 IHK-PGKPNNETASYRPISLLPAMAKFTNGSFGNASGTSLP 560
+ K P K E +SYR I LLP K N LP
Sbjct: 498 LLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVLP 538
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/87 (31%), Positives = 39/87 (44%)
Frame = +3
Query: 255 SDEVREVIDNLQPKKAPGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADV 434
S EV E ++P KAPG DGI +K + + +FP WK+ +
Sbjct: 404 SCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKL 463
Query: 435 IGIHKPGKPNNETASYRPISLLPAMAK 515
+ + K P N SYRP+ LL + K
Sbjct: 464 VLLLKGKGPANVPRSYRPLCLLDIVGK 490
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 41.5 bits (93), Expect = 0.001
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 342 LPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETASYRPISLLPAMAK 515
LP+ + + + NA FP WK++ +I I KP K + SYRPISLL ++K
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQ-PSYRPISLLTCLSK 61
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 512 KIYERLLRKRLWDFVTANKILIDEQFGFRAKRS 610
KI ++++ KRLW VT N ++ D+QFGF+ +S
Sbjct: 519 KILDKIIAKRLWWLVTYNNLINDKQFGFKKGKS 551
Score = 33.5 bits (73), Expect = 0.26
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 300 APGSDGIRNHALKLLPVQLITMLATILNAAMTHCIFPAVWKEADVIGIHKPGKPNNETAS 479
APG + I +K + + N I P +K + +I I KP +T+S
Sbjct: 449 APGLNRISYQMIKNSSHTTKNRITKLFNEIFNSHI-PQAYKTSLIIPILKPNTDKTKTSS 507
Query: 480 YRPISLLPAMAK 515
YRPISL +AK
Sbjct: 508 YRPISLNCCIAK 519
>BT021469-1|AAX33617.1| 530|Drosophila melanogaster AT07710p
protein.
Length = 530
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 264 VREVIDNLQPKKAPGSDGIRNHALKLLPVQLITML 368
V +++D + P++ P GIRN LK V+L+T L
Sbjct: 19 VNKILDFVLPRQKPKFSGIRNPLLKKSVVELVTQL 53
>AE014297-695|AAF54189.1| 530|Drosophila melanogaster CG7910-PA
protein.
Length = 530
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 264 VREVIDNLQPKKAPGSDGIRNHALKLLPVQLITML 368
V +++D + P++ P GIRN LK V+L+T L
Sbjct: 19 VNKILDFVLPRQKPKFSGIRNPLLKKSVVELVTQL 53
>AY051924-1|AAK93348.1| 678|Drosophila melanogaster LD40883p
protein.
Length = 678
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 314 RHPQPRVKTLTSPTXNNVGYHPKCRYDALHLSGGMERSG 430
R P+P+ KT T T N+ K + L GGME +G
Sbjct: 508 RSPEPKAKTKTPETTNSTSECKKILDNMLFKMGGMEATG 546
>AE014297-3733|AAF56411.2| 678|Drosophila melanogaster CG11849-PA
protein.
Length = 678
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 314 RHPQPRVKTLTSPTXNNVGYHPKCRYDALHLSGGMERSG 430
R P+P+ KT T T N+ K + L GGME +G
Sbjct: 508 RSPEPKAKTKTPETTNSTSECKKILDNMLFKMGGMEATG 546
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,235,973
Number of Sequences: 53049
Number of extensions: 600674
Number of successful extensions: 2024
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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