Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060786.seq
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.40 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    23   2.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   2.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   5.0  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 230 PNSSFKLP*SSLNRTDETPRDSDHTF*FTFTS 135
           P +SFKL  SS +  DE PR    T   TF++
Sbjct: 91  PTTSFKLKDSSSDSEDERPRPGGGTKYQTFSN 122


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = +1

Query: 13  FVQRHLLFL*CLN-FVFHML 69
           F   HLLFL CL+ F  H+L
Sbjct: 188 FFNMHLLFLLCLDYFTLHLL 207


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 265  KTLKNEYYGKGARIPVSNC 209
            KTL NE  G  + I V+NC
Sbjct: 2681 KTLNNELRGTPSDISVTNC 2699


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 316 TNTIFV*ITKIMSLHNTKTLKNEYY 242
           T T+F+   K  SL N   LK+ YY
Sbjct: 15  TVTLFMPFGKFESLRNAAELKDFYY 39


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 316 TNTIFV*ITKIMSLHNTKTLKNEYY 242
           T T+F+   K  SL N   LK+ YY
Sbjct: 233 TVTLFMPFGKFESLRNAAELKDFYY 257


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 316 TNTIFV*ITKIMSLHNTKTLKNEYY 242
           T T+F+   K  SL N   LK+ YY
Sbjct: 233 TVTLFMPFGKFESLRNAAELKDFYY 257


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 316 TNTIFV*ITKIMSLHNTKTLKNEYY 242
           T T+F+   K  SL N   LK+ YY
Sbjct: 233 TVTLFMPFGKFESLRNAAELKDFYY 257


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 279 DIILVIYTNIVFVVN*LNK 335
           D++L IY+ +VF+   +NK
Sbjct: 212 DLVLPIYSQLVFMCKKINK 230


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 383 NMEDKETYKELGNGQRK 433
           N  + E YKE+ NG+RK
Sbjct: 204 NNNNIELYKEIFNGKRK 220


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 585 RCCTEVIAPSTERR 544
           RCC   +AP T+ R
Sbjct: 614 RCCYHAVAPGTDIR 627


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 585 RCCTEVIAPSTERR 544
           RCC   +AP T+ R
Sbjct: 506 RCCYHAVAPGTDIR 519


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 310 TIFV*ITKIMSLHNTKTLKNEYY 242
           T+F+   K  SL N   LK+ YY
Sbjct: 2   TLFMPFGKFESLRNAAELKDFYY 24


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 428 SGHFQALYKFLYLPYF 381
           S HF  + +FL LP++
Sbjct: 70  SAHFSFMSRFLCLPFY 85


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 428 SGHFQALYKFLYLPYF 381
           S HF  + +FL LP++
Sbjct: 26  SAHFSFMSRFLCLPFY 41


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 639 YHSI*LGPFGGTLVYS 592
           YH   LG FG T VY+
Sbjct: 135 YHHQLLGHFGATKVYN 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,038
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)