Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060786.seq
(639 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 101 2e-21
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 101 2e-21
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 101 2e-21
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 101 2e-21
M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein. 99 1e-20
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 73 7e-13
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 73 7e-13
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 101 bits (242), Expect = 2e-21
Identities = 58/96 (60%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +3
Query: 354 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADDL-VQLPIS 530
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+ I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 531 SHV*IVSQCLAQLLLYSTDSSCTLKCHQTGLVIYCG 638
S V +S L + K GLV+YCG
Sbjct: 64 SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCG 98
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 101 bits (242), Expect = 2e-21
Identities = 58/96 (60%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +3
Query: 354 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADDL-VQLPIS 530
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+ I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 531 SHV*IVSQCLAQLLLYSTDSSCTLKCHQTGLVIYCG 638
S V +S L + K GLV+YCG
Sbjct: 64 SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCG 98
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 101 bits (242), Expect = 2e-21
Identities = 58/96 (60%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +3
Query: 354 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADDL-VQLPIS 530
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+ I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 531 SHV*IVSQCLAQLLLYSTDSSCTLKCHQTGLVIYCG 638
S V +S L + K GLV+YCG
Sbjct: 64 SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCG 98
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 101 bits (242), Expect = 2e-21
Identities = 58/96 (60%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Frame = +3
Query: 354 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADDL-VQLPIS 530
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+ I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 531 SHV*IVSQCLAQLLLYSTDSSCTLKCHQTGLVIYCG 638
S V +S L + K GLV+YCG
Sbjct: 64 SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLVVYCG 98
>M75715-1|AAA36665.1| 428|Homo sapiens TB3-1 protein.
Length = 428
Score = 99.1 bits (236), Expect = 1e-20
Identities = 57/96 (59%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Frame = +3
Query: 354 EESSADRNVEIWKIKKLIKSLEMARGNGTSMISLIIPPKDQISRVSKMLADDL-VQLPIS 530
+ S+ADRNVEIWKIKKLIKSLE ARGNGTSMISLIIPPKDQISRV+KMLAD+ I
Sbjct: 4 DPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIK 63
Query: 531 SHV*IVSQCLAQLLLYSTDSSCTLKCHQTGLVIYCG 638
S V +S L + K GL +YCG
Sbjct: 64 SRVNRLS-VLGAITSVQQRLKLYNKVPPNGLEVYCG 98
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 73.3 bits (172), Expect = 7e-13
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +2
Query: 509 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNG 619
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNG
Sbjct: 23 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNG 59
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/66 (48%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 444 MISLIIPPKDQISRVSKMLADDL-VQLPISSHV*IVSQCLAQLLLYSTDSSCTLKCHQTG 620
MISLIIPPKDQISRV+KMLAD+ I S V +S L + K G
Sbjct: 1 MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLS-VLGAITSVQQRLKLYNKVPPNG 59
Query: 621 LVIYCG 638
LV+YCG
Sbjct: 60 LVVYCG 65
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 73.3 bits (172), Expect = 7e-13
Identities = 35/37 (94%), Positives = 35/37 (94%)
Frame = +2
Query: 509 FGTASNIKSRVNRLSVLGAITSVQHRLKLYTKVPPNG 619
FGTASNIKSRVNRLSVLGAITSVQ RLKLY KVPPNG
Sbjct: 23 FGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNG 59
Score = 48.8 bits (111), Expect = 2e-05
Identities = 32/66 (48%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +3
Query: 444 MISLIIPPKDQISRVSKMLADDL-VQLPISSHV*IVSQCLAQLLLYSTDSSCTLKCHQTG 620
MISLIIPPKDQISRV+KMLAD+ I S V +S L + K G
Sbjct: 1 MISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLS-VLGAITSVQQRLKLYNKVPPNG 59
Query: 621 LVIYCG 638
LV+YCG
Sbjct: 60 LVVYCG 65
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,162,282
Number of Sequences: 237096
Number of extensions: 1764219
Number of successful extensions: 3500
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3495
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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