Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060785.seq
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-l... 171 2e-41
UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck viru... 58 2e-07
UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red ... 55 2e-06
UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10; Tym... 54 3e-06
UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat... 54 4e-06
UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent viru... 52 1e-05
UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosai... 48 1e-04
UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow... 46 6e-04
UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Vir... 46 6e-04
UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosa... 45 0.001
UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden death-a... 44 0.004
UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 39 0.088
UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; ... 38 0.15
UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 36 1.1
UniRef50_Q6WGM0 Cluster: Attachment glycoprotein; n=1; Mossman v... 34 2.5
UniRef50_Q54RH9 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserve... 34 2.5
UniRef50_UPI000065FE71 Cluster: Homolog of Homo sapiens "ETS dom... 33 4.4
UniRef50_A3EUN9 Cluster: Putative adhesin; n=1; Leptospirillum s... 33 4.4
UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat ... 33 5.8
UniRef50_P08640 Cluster: Mucin-like protein 1 precursor; n=6; Sa... 33 7.7
>UniRef50_Q6AW70 Cluster: Coat protein; n=1; Bombyx mori Macula-like
latent virus|Rep: Coat protein - Bombyx mori Macula-like
latent virus
Length = 237
Score = 171 bits (415), Expect = 2e-41
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +2
Query: 254 QSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVN 433
+SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG N
Sbjct: 92 KSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGFN 151
Query: 434 VLATPSSARITIGGLALMHQATLPC 508
VLATPSSARIT+GGLALMHQATLPC
Sbjct: 152 VLATPSSARITMGGLALMHQATLPC 176
Score = 97.5 bits (232), Expect = 2e-19
Identities = 53/84 (63%), Positives = 53/84 (63%)
Frame = +3
Query: 3 VVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQXXXXXXXXXXXXXXXXXXXXXXXXXX 182
VVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQ
Sbjct: 8 VVSAASAIPSLVNAFSSSKPPQTDNPSARSMDMQPLPSSDSVVLSSQPLPPAPPPPLGSS 67
Query: 183 XXXXXQRLIIPFQRLYFDLTGTET 254
QRLIIPFQRLYFDLTGTET
Sbjct: 68 LGRSPQRLIIPFQRLYFDLTGTET 91
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +1
Query: 502 PLHLGYINPIIKSPIPYTNHPRLNIHFHQSPGGGLEGVRAGLK 630
P LGYINPIIKSPIPYTNHPRLNIHFHQS LEGVRAG+K
Sbjct: 175 PCDLGYINPIIKSPIPYTNHPRLNIHFHQSADAVLEGVRAGVK 217
>UniRef50_Q8UZB5 Cluster: Coat protein; n=1; Grapevine fleck
virus|Rep: Coat protein - Grapevine fleck virus
Length = 230
Score = 57.6 bits (133), Expect = 2e-07
Identities = 31/81 (38%), Positives = 43/81 (53%)
Frame = +2
Query: 263 SVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 442
S+++ S P V ++ + YR A L +LEA V P+A S P TVDLCWT VT +L+
Sbjct: 86 SLSIASRPEVVTVARPYRHARLTSLEAFVQPTASSATYPQTVDLCWTIDSVTPARSEILS 145
Query: 443 TPSSARITIGGLALMHQATLP 505
+ RI G + LP
Sbjct: 146 VFGAQRIAWGSVHFSAPILLP 166
>UniRef50_Q71EB5 Cluster: 25kDa coat protein; n=1; Grapevine Red
Globe virus|Rep: 25kDa coat protein - Grapevine Red
Globe virus
Length = 235
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/93 (33%), Positives = 47/93 (50%)
Frame = +2
Query: 263 SVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLA 442
S+ + S P S+ Y A L +LE VFP PS P++ D W ++ V++ G +L+
Sbjct: 89 SLDLASKPPFLSLTSPYAYAVLQSLELTVFPKNPSYTYPMSFDAHWHSSSVSITGSQILS 148
Query: 443 TPSSARITIGGLALMHQATLPCISATSTRSSNP 541
T R+T GG ++ P I RS+NP
Sbjct: 149 TYGGTRVTFGGPI---TSSNPIILPADLRSTNP 178
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +1
Query: 367 PQNTSHS*PLLDYC*RHS*RSQCAGHPFIRSHYYWR---SRPYASSYP---PLHLGYINP 528
P+N S++ P+ HS G + ++ R P SS P P L NP
Sbjct: 119 PKNPSYTYPMSFDAHWHSSSVSITGSQILSTYGGTRVTFGGPITSSNPIILPADLRSTNP 178
Query: 529 IIKSPIPYTNHPRLNIHFHQS 591
++K + Y N P+L + FH++
Sbjct: 179 VVKDTVSYNNTPKLTVAFHKN 199
>UniRef50_Q9IW08 Cluster: Replicase-associated protein; n=10;
Tymoviridae|Rep: Replicase-associated protein -
Poinsettia mosaic virus
Length = 1987
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 287 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARIT 466
++S I YR A L L+A+V P+A S + P+T+DL W+T +V + +L R
Sbjct: 1845 SLSEITAPYRKARLAELKAIVCPTAASFQSPITLDLVWSTNNVIFTDLQILQVYGGTRFA 1904
Query: 467 IGGLALMH 490
IGG L H
Sbjct: 1905 IGGPLLSH 1912
>UniRef50_P20124 Cluster: Coat protein; n=10; Tymovirus|Rep: Coat
protein - Ononis yellow mosaic virus
Length = 192
Score = 53.6 bits (123), Expect = 4e-06
Identities = 32/98 (32%), Positives = 47/98 (47%)
Frame = +2
Query: 182 PGTVSSTFDHPFSTPVLRSYWHRNQSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 361
PG S + PF V S +T+ S P ++ + YR A +V EAV+FP++
Sbjct: 25 PGQQSPSMVVPFQVSV-SDLGVSEVSAQITLSSDPTLAQLTSIYRMASIVECEAVLFPNS 83
Query: 362 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 475
S K PV DL W ++ + +L T R T+GG
Sbjct: 84 TSSKNPVHCDLIWVPSNSSASPKTILQTYGGNRFTVGG 121
>UniRef50_P35927 Cluster: Coat protein; n=2; Erysimum latent
virus|Rep: Coat protein - Erysimum latent virus (ELV)
Length = 202
Score = 52.0 bits (119), Expect = 1e-05
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +2
Query: 254 QSNSVTVQ--SLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEG 427
Q SVT+ + P +++ + +R A L L AVV PSA S+ P+TV L W A T
Sbjct: 57 QEGSVTLPLATFPKMATFLSRHRRAQLTQLHAVVSPSAVSIGHPLTVQLIWVPASSTTTS 116
Query: 428 VNVLATPSSARITIGG 475
+L T +I++GG
Sbjct: 117 SQILGTYGGQQISVGG 132
>UniRef50_P03608 Cluster: Coat protein; n=21; Turnip yellow mosaic
virus|Rep: Coat protein - Turnip yellow mosaic virus
Length = 189
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +2
Query: 182 PGTVSSTFDHPFSTPVLRSYWHRNQSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 361
PG T PF + VL + ++ S+T+ ++ +VS++ YR A L +L + P+
Sbjct: 24 PGPSPLTIKQPFQSEVLFA-GTKDAEASLTIANIDSVSTLTTFYRHASLESLWVTIHPTL 82
Query: 362 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 475
+ P TV +CW A+ V + T IGG
Sbjct: 83 QAPTFPTTVGVCWVPANSPVTPAQITKTYGGQIFCIGG 120
>UniRef50_Q8QY74 Cluster: Coat protein; n=1; Passion fruit yellow
mosaic virus|Rep: Coat protein - Passion fruit yellow
mosaic virus
Length = 188
Score = 46.4 bits (105), Expect = 6e-04
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +2
Query: 182 PGTVSSTFDHPFSTPVLRSYWHRNQSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 361
PG PF T L S S+SV++ + VSS+ YR A L +L A + P+
Sbjct: 28 PGNAPPVIKLPFQTK-LASLGTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNH 86
Query: 362 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG-LALMHQATLPC 508
S P TV L W + T ++L IGG + + ++PC
Sbjct: 87 LSPSNPTTVSLVWVPFNSTATSSDILNVFGGQSFCIGGAVNSLAAISVPC 136
>UniRef50_O89519 Cluster: Virion protein; n=2; Tymovirus|Rep: Virion
protein - Dulcamara mottle virus
Length = 188
Score = 46.4 bits (105), Expect = 6e-04
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 445
V++ + +++ + GYR A LV L + P+ ++ PVTVD+ W A+ T +L+
Sbjct: 52 VSLSASESLAKLTAGYRRAKLVELFLTITPTQLAIDNPVTVDVVWVPANSTATPSKILSV 111
Query: 446 PSSARITIGGLALMHQA-TLPC 508
R IGG Q +PC
Sbjct: 112 YGGQRFLIGGTLTTSQVIRVPC 133
>UniRef50_O89518 Cluster: Virion protein; n=1; Wild cucumber mosaic
virus|Rep: Virion protein - Wild cucumber mosaic virus
Length = 188
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 212 PFSTPV-LRSYWHRNQSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTV 388
PF + + ++ + S+ +++ S P + + +R A L++ +A++ P + +P+TV
Sbjct: 33 PFKFQIHVANFGPKEVSSQISLSSCPELLRLTSLFRHARLLSAKAIITPFDGVVSLPITV 92
Query: 389 DLCWTTADVTVEGVNVLATPSSARITIGG 475
DL W +A+ ++L + T GG
Sbjct: 93 DLAWVSANSPASPTDILKIYGGSSYTFGG 121
>UniRef50_Q3HWZ1 Cluster: Polyprotein; n=7; Citrus sudden
death-associated virus|Rep: Polyprotein - Citrus sudden
death-associated virus
Length = 2189
Score = 43.6 bits (98), Expect = 0.004
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +2
Query: 185 GTVSSTFDHPFSTPVLRSYWHRNQSN-SVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSA 361
G + + D+PF V+ SY N S + ++ ++ YR A L ++E V P A
Sbjct: 2025 GLNAPSVDYPFQW-VVASYDGSEAKNLSDDLSGSATLTKVMANYRHAELTSVELEVCPLA 2083
Query: 362 PSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQAT 499
+ P++V WT A ++ + + T+GG LM T
Sbjct: 2084 AAFSKPISVSAVWTIASISPASASETSYYGGRLFTVGGPVLMSSTT 2129
>UniRef50_Q6CCA2 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 911
Score = 39.1 bits (87), Expect = 0.088
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = +2
Query: 320 AYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQAT 499
A + A++ P+A +L +P DL T D+T T + +T ALM AT
Sbjct: 544 ALMETATALMVPTATALMVPTATDLTTTATDLTTTATATDLTTTVTDLTTTATALMETAT 603
Query: 500 LPCISATSTRSSNPRFHTPTTPDLTSISINPLVAD 604
+ T+T + P T P T +++ P V D
Sbjct: 604 ALTV-PTATDLTVPTATDLTVPTATDLTV-PTVTD 636
Score = 38.3 bits (85), Expect = 0.15
Identities = 25/110 (22%), Positives = 51/110 (46%)
Frame = +2
Query: 257 SNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNV 436
+ + T ++P V+++++ + A++ P+A L +P DL T D+T +
Sbjct: 662 TTTATDLTVPTVTALMETATALMVPTATALMVPTATDLMVPTATDLTTTVTDLTTTATAL 721
Query: 437 LATPSSARITIGGLALMHQATLPCISATSTRSSNPRFHTPTTPDLTSISI 586
+ T ++ + ALM AT + T+T P T P T++++
Sbjct: 722 METATALTVPT-ATALMETATALTV-PTATALMVPTATDLTVPTATALTV 769
>UniRef50_P89920 Cluster: Replicase-associated polyprotein; n=5; Oat
blue dwarf virus|Rep: Replicase-associated polyprotein -
Oat blue dwarf virus
Length = 2066
Score = 38.3 bits (85), Expect = 0.15
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 287 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARIT 466
++S + GYR A L++ E P A + P++V WT A + L +T
Sbjct: 1934 HLSRLTIGYRHAELISAELEFAPLAAAFAKPISVTAVWTIASIAPATTTELQYYGGRLLT 1993
Query: 467 IGGLALMHQAT 499
+GG LM T
Sbjct: 1994 LGGPVLMGSVT 2004
>UniRef50_P19128 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Cacao yellow mosaic virus
Length = 188
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/92 (22%), Positives = 39/92 (42%)
Frame = +2
Query: 266 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLAT 445
V++ + +++ YR A L +L+A++ P+ + P +V L W + T +L
Sbjct: 51 VSIAAQAAITAYTSLYRHAILTDLQAIIHPNGYAPAFPTSVALAWVPYNSTATAAKILDV 110
Query: 446 PSSARITIGGLALMHQATLPCISATSTRSSNP 541
+GG +T P I + NP
Sbjct: 111 FGGQEFCVGGSI---NSTSPIIVPCPLTNINP 139
>UniRef50_Q6WGM0 Cluster: Attachment glycoprotein; n=1; Mossman
virus|Rep: Attachment glycoprotein - Mossman virus
Length = 632
Score = 34.3 bits (75), Expect = 2.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 446 PSSARITIGGLALMHQATLPCISATSTRSSNPRFHTPTTPDLTSI-SINPLVAD*K 610
P R+T G +H+ + S ++ R+ NPR P+T +LTS+ S PL D K
Sbjct: 491 PIRGRVTFDGQVTLHEHSRTYDSLSNQRACNPRLGCPSTCELTSMASYFPLDKDFK 546
>UniRef50_Q54RH9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1256
Score = 34.3 bits (75), Expect = 2.5
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 365 SLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGGLALMHQATLPCISATSTRSSNPR 544
S K P T +T ++ VN + TP+++ I + G+ T ++ ST +
Sbjct: 920 STKDPETTTTTTSTTELDAATVNPIITPATSEIILSGVESKETTTTTTTTSESTDIPSTS 979
Query: 545 FHTPTTPDLTSISI-NPLVAD 604
T T+P+ TS + N LV++
Sbjct: 980 TITSTSPNNTSSELENSLVSE 1000
>UniRef50_Q5JJ70 Cluster: Hypothetical membrane protein, conserved;
n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
membrane protein, conserved - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 541
Score = 34.3 bits (75), Expect = 2.5
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 287 NVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARI 463
NVS +KG ++ Y V+ VV P SL + +D ++ + TVE +T S +R+
Sbjct: 180 NVSLSVKGVKELYSVSKSMVVAPGYSSLVFEIPIDSKYSEGEYTVELAVRCSTTSVSRL 238
>UniRef50_UPI000065FE71 Cluster: Homolog of Homo sapiens "ETS domain
transcription factor ERF; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "ETS domain transcription factor
ERF - Takifugu rubripes
Length = 803
Score = 33.5 bits (73), Expect = 4.4
Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Frame = +2
Query: 188 TVSSTFDHPFSTPVLRSYWHRNQSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPS 367
T ST S V + H SNSV + N++ I ++ L ++ A V +A
Sbjct: 523 TTISTSSPALSDTVNTAANHFKSSNSVVISMNKNINKSIISSNNSKLPSV-ATVDSTATE 581
Query: 368 LKIPVTVDLCWTTADVTVE--GVNVLATPSSARITIGGLALMHQATLPCISATSTRSSNP 541
V+++ + D + G N PSS R + A H A L AT +
Sbjct: 582 TNHLVSIENRTRSIDYHEKESGENETGAPSSVRSSSTDTASEHSADLDVNEATRSSQHQK 641
Query: 542 RFHTPTTPDLTS 577
F TP P+ S
Sbjct: 642 IFDTPDHPNSAS 653
>UniRef50_A3EUN9 Cluster: Putative adhesin; n=1; Leptospirillum sp.
Group II UBA|Rep: Putative adhesin - Leptospirillum sp.
Group II UBA
Length = 362
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +2
Query: 239 YW----HRNQSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVT 385
YW HR ++ T Q + VS+ + GY Y + V P+ P++ IPV+
Sbjct: 34 YWIQQQHRQLTDQTTAQEIRQVSTALSGYIQTYASTISGVATPTKPAV-IPVS 85
>UniRef50_P15158 Cluster: Coat protein; n=9; Tymovirus|Rep: Coat
protein - Belladonna mottle virus (BMDV)
Length = 190
Score = 33.1 bits (72), Expect = 5.8
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = +2
Query: 266 VTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVL 439
V++Q+ ++ + YR A +V +A++ P+ ++ P+TV L W A+ +L
Sbjct: 52 VSLQTADPITKLTAPYRHAQIVECKAILTPTDLAVSNPLTVYLAWVPANSPATPTQIL 109
>UniRef50_P08640 Cluster: Mucin-like protein 1 precursor; n=6;
Saccharomyces cerevisiae|Rep: Mucin-like protein 1
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 1367
Score = 32.7 bits (71), Expect = 7.7
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = +2
Query: 353 PSAPSLKIPVTVDLCWTTADVTVEGVNVLATP--SSARITIGGLALMHQATLPCISATST 526
P + +P T TT+ T V +T S+ T G T+PC ++ S
Sbjct: 960 PKTVTTTVPTTTTTSVTTSSTTTITTTVCSTGTNSAGETTSGCSPKTITTTVPCSTSPSE 1019
Query: 527 RSSNPRFHTPTTPDLTSIS 583
+S +PTTP T +S
Sbjct: 1020 TASESTTTSPTTPVTTVVS 1038
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,099,636
Number of Sequences: 1657284
Number of extensions: 12539183
Number of successful extensions: 44707
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 42084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44657
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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