Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060785.seq
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022458-1|AAY54874.1|   44|Drosophila melanogaster IP05917p pro...    29   7.0  
BT022413-1|AAY54829.1|   44|Drosophila melanogaster IP05617p pro...    29   7.0  
AE014297-26|ABI31120.1|   44|Drosophila melanogaster CG14638-PB,...    29   7.0  
BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p pro...    28   9.3  
BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p pro...    28   9.3  

>BT022458-1|AAY54874.1|   44|Drosophila melanogaster IP05917p
           protein.
          Length = 44

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 249 ETNRTVSLCNHYRTSPPSSKATAT 320
           E    V++CNHY  SP S K  AT
Sbjct: 6   ERRLAVTICNHYGRSPRSEKECAT 29


>BT022413-1|AAY54829.1|   44|Drosophila melanogaster IP05617p
           protein.
          Length = 44

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 249 ETNRTVSLCNHYRTSPPSSKATAT 320
           E    V++CNHY  SP S K  AT
Sbjct: 6   ERRLAVTICNHYGRSPRSEKECAT 29


>AE014297-26|ABI31120.1|   44|Drosophila melanogaster CG14638-PB,
           isoform B protein.
          Length = 44

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 249 ETNRTVSLCNHYRTSPPSSKATAT 320
           E    V++CNHY  SP S K  AT
Sbjct: 6   ERRLAVTICNHYGRSPRSEKECAT 29


>BT030255-1|ABN49394.1|  424|Drosophila melanogaster IP18339p
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = +2

Query: 296 SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 475
           S I+  RD Y   L+ +  P A +    VTV    TT D+  +   +  T S+A  T   
Sbjct: 60  SAIQSCRDGYYCVLDGICAPMASAEPACVTVTSTATT-DIVTDSSTLETTESTATTT--- 115

Query: 476 LALMHQATLPCISAT--STRSSNPRFHTPTTPDLTS 577
            A    +T+  I  T  +T S+   F T ++ D T+
Sbjct: 116 -AETTDSTVTEILTTQFTTDSTTSEFSTDSSTDSTT 150


>BT030205-1|ABN49344.1|  424|Drosophila melanogaster IP18039p
           protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = +2

Query: 296 SIIKGYRDAYLVNLEAVVFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSARITIGG 475
           S I+  RD Y   L+ +  P A +    VTV    TT D+  +   +  T S+A  T   
Sbjct: 60  SAIQSCRDGYYCVLDGICAPMASAEPACVTVTSTATT-DIVTDSSTLETTESTATTT--- 115

Query: 476 LALMHQATLPCISAT--STRSSNPRFHTPTTPDLTS 577
            A    +T+  I  T  +T S+   F T ++ D T+
Sbjct: 116 -AETTDSTVTEILTTQFTTDSTTSEFSTDSSTDSTT 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,616,696
Number of Sequences: 53049
Number of extensions: 595093
Number of successful extensions: 2041
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2041
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)