Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060784.seq
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0241 - 8204430-8205398 65 5e-11
03_03_0256 + 15898702-15900420 43 2e-04
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 42 6e-04
08_02_1540 + 27694565-27694579,27696364-27696447,27696599-276967... 40 0.001
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 40 0.001
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 40 0.002
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 40 0.002
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 40 0.002
03_05_0448 - 24426509-24426737,24427306-24427401,24427723-244278... 38 0.007
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 38 0.007
01_01_0542 + 3975500-3975546,3976273-3976370,3976694-3976830,397... 37 0.016
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 36 0.036
11_01_0204 - 1612505-1612636,1612809-1612926,1613050-1613162,161... 36 0.036
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 35 0.048
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 35 0.048
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 35 0.063
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 34 0.083
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 34 0.083
07_03_1546 + 27602598-27602917,27602995-27603052,27603130-276032... 33 0.15
07_03_0971 + 23038409-23039134,23040321-23040611 33 0.19
12_02_0111 - 13749387-13749634,13750319-13750472 32 0.34
09_06_0328 + 22365308-22365415,22365743-22366018,22366166-223664... 32 0.34
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496... 32 0.45
04_03_0368 + 15004949-15005659,15005789-15005848 32 0.45
02_03_0367 + 18220099-18220905 32 0.45
02_02_0017 - 6131265-6131284,6131654-6131774,6132011-6132146,613... 31 0.59
02_02_0016 - 6118739-6118758,6119116-6119236,6119478-6119613,611... 31 0.59
08_01_0255 + 2089543-2089583,2089696-2090089,2090797-2090862,209... 31 0.78
01_05_0653 - 23948911-23948937,23949031-23949141,23949361-239494... 31 1.0
06_01_0320 - 2320317-2320336,2320791-2320902,2321092-2321236,232... 30 1.4
09_02_0152 + 5040845-5041001,5042645-5042757,5043556-5043816,504... 29 2.4
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 29 2.4
09_06_0121 + 20975132-20975755,20976834-20976977,20977333-209774... 29 3.1
02_05_0322 - 27926619-27927686 29 3.1
08_01_0253 + 2072766-2072954,2073526-2073591,2073755-2073877,207... 29 4.1
08_01_0190 - 1583044-1583802 29 4.1
08_02_0014 + 11255063-11255167,11256589-11256858,11257882-112582... 28 5.5
06_01_0323 + 2339916-2340065,2340535-2340732,2341158-2341307,234... 28 5.5
02_01_0054 - 404464-405152,406087-406618 28 5.5
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 28 7.2
05_03_0575 - 15643819-15644295 28 7.2
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 28 7.2
02_04_0593 + 24177897-24178182,24178442-24178509,24178617-241788... 28 7.2
11_06_0627 + 25633537-25633884,25635246-25635869 27 9.6
06_03_0967 - 26395537-26396590,26400918-26401111 27 9.6
04_04_0475 + 25500470-25500609,25500697-25500794,25502806-255029... 27 9.6
02_05_1194 - 34881450-34881593,34882023-34882220,34882522-348826... 27 9.6
02_04_0084 - 19579104-19579230,19580323-19580417,19580578-195807... 27 9.6
>02_02_0241 - 8204430-8205398
Length = 322
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/79 (40%), Positives = 46/79 (58%)
Frame = +3
Query: 3 ARGAGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWS 182
A+ AG AV+RV+FSPH +L + SYD T +WD ++ L HH+EF G+ S
Sbjct: 235 AQLAGHGYAVKRVKFSPHRQGMLMSCSYDMTVCMWDYRKEDALLARYGHHTEFVAGIDMS 294
Query: 183 PLRPHQLADCGWDSLVHVF 239
L LA GWD +++V+
Sbjct: 295 VLVEGLLASTGWDEMIYVW 313
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWD--LKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGW 218
+S S+ AA S D + R++D L +P+ +R H+ +GL W+P+R W
Sbjct: 73 WSESHESLCAAASGDGSVRLFDVALPPAQNPVRLLREHAREVHGLDWNPVRRDAFLSASW 132
Query: 219 DSLVHVFTP 245
D + +++P
Sbjct: 133 DDTLKLWSP 141
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + + + PS+LA S D + R+WD++ PL + H + +SP R L
Sbjct: 200 VLSLDWDKYDPSILATGSVDKSIRVWDVRAPRAPLAQLAGHGYAVKRVKFSPHRQGMLMS 259
Query: 210 CGWDSLV 230
C +D V
Sbjct: 260 CSYDMTV 266
>03_03_0256 + 15898702-15900420
Length = 572
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = +3
Query: 12 AGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLR 191
AG C +V FSP V++ + + WD K C +T++ H+ G W PL
Sbjct: 502 AGYAC---QVNFSPDGRFVMSGDG-EGSCWFWDWK-SCRRFKTLKCHNGVCIGCEWHPLE 556
Query: 192 PHQLADCGWDSLV 230
++A CGWD ++
Sbjct: 557 TSKVATCGWDGVI 569
>07_03_0011 + 12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/78 (30%), Positives = 45/78 (57%)
Frame = +3
Query: 48 SPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSL 227
+P+ +LA+ S+D T ++W++++G L ++ H + Y +A+SP LA D
Sbjct: 965 NPNQQLLLASASFDSTIKLWEVEQG-RLLYSLAGHRQPVYSVAFSP-GGEYLASGSLDQC 1022
Query: 228 VHVFTPRSLREGRCSPTY 281
+H++ S++EGR TY
Sbjct: 1023 LHIW---SVKEGRILKTY 1037
>08_02_1540 +
27694565-27694579,27696364-27696447,27696599-27696731,
27696840-27696951,27697530-27697629,27697810-27697937,
27698046-27698115,27698548-27698636,27698719-27698764,
27698854-27698924,27699002-27699075,27699341-27699433,
27699539-27699572,27699704-27699789,27702147-27702223,
27702445-27702533,27702630-27702813,27703068-27703249,
27703962-27704064,27704159-27704490,27704577-27705018,
27705749-27705846,27706988-27707081,27707666-27707787,
27708025-27708078,27708185-27708304,27708595-27708799,
27708889-27709059,27709155-27709310,27709375-27709431,
27709474-27709580,27709708-27709798,27709931-27710072,
27710149-27710305,27710400-27710516,27710596-27710722,
27710844-27711066,27711460-27711466,27711656-27711788
Length = 1574
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 33 RRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADC 212
R V ++P ++ +F R+WDL+ PL+ + HS +T+ + +P +
Sbjct: 202 RDVDYNPKKQHLITTAEDEFGIRLWDLRMLKYPLKNLPGHSHWTWAVRHNPEHDQLILSA 261
Query: 213 GWDSLVHVF 239
G DS V+++
Sbjct: 262 GTDSTVNLW 270
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGW 218
V+FSP S S LA S+D T R+WD L T HS L + P + + C
Sbjct: 653 VRFSP-SMSRLATSSFDKTVRVWDADNTSYSLRTFTGHSASVMSLDFHPNKEDMICSCDG 711
Query: 219 DSLVHVFTPRSLREGRC 269
D V + S+ G C
Sbjct: 712 DGEVRSW---SINNGSC 725
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +3
Query: 12 AGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLR 191
+G + V + FSP + ++LA+ S+D T R+WD+ +ET + HS LA+ P
Sbjct: 502 SGHQGPVHGLMFSPIN-AILASSSWDKTVRLWDVFESKGAVETFQ-HSHDVLTLAYRP-D 558
Query: 192 PHQLADCGWDSLVHVFTP 245
Q+A D L+H + P
Sbjct: 559 GRQIACSTLDGLIHFWDP 576
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCG 215
R+ F P S LA S+D T R+WD+ G + L HS YG+++ P A CG
Sbjct: 319 RLAFHP-SGGYLATASFDKTWRLWDVSTGKE-LLLQEGHSRSVYGVSFHP-DGSLAASCG 375
Query: 216 WDSLVHVFTPRSLR 257
D+ V+ RS R
Sbjct: 376 LDAYARVWDLRSGR 389
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCG 215
R+ F P S LA S+D T R+WD+ G + L HS YG+++ P A CG
Sbjct: 319 RLAFHP-SGGYLATASFDKTWRLWDVSTGKE-LLLQEGHSRSVYGVSFHP-DGSLAASCG 375
Query: 216 WDSLVHVFTPRSLR 257
D+ V+ RS R
Sbjct: 376 LDAYARVWDLRSGR 389
>03_05_0448 -
24426509-24426737,24427306-24427401,24427723-24427847,
24428694-24428846,24429921-24430247,24431415-24431630,
24431768-24432112,24433897-24434253
Length = 615
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + F+P + V+A S D T +++DL++ L T H E + + WSP LA
Sbjct: 467 VNCLAFNPFNEWVVATGSTDKTVKLFDLRKIDTSLHTFDCHKEEVFQVGWSPKNETILAS 526
Query: 210 C 212
C
Sbjct: 527 C 527
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 63 SVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLV 230
+VLA+ S D T +IWD+ G + T+ HH + +AWS P L +D V
Sbjct: 259 NVLASASADKTVKIWDVSVGKCAV-TLEHHDDKVQSVAWSRQSPEVLLSGSFDKSV 313
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V+ V +S SP VL + S+D + + D+K G ++ LAW P H
Sbjct: 291 VQSVAWSRQSPEVLLSGSFDKSVAMNDMKDGGQSCNKWSVEAD-VESLAWDPHNEHSFMV 349
Query: 210 CGWDSLVHVFTPRS 251
+ +V F R+
Sbjct: 350 SLENGMVQAFDKRT 363
>01_01_0542 +
3975500-3975546,3976273-3976370,3976694-3976830,
3977518-3977871,3977953-3978041,3978502-3978589,
3978659-3978734,3978858-3978907,3979032-3979340,
3979803-3979982,3980086-3980325,3980471-3980582,
3980931-3981040,3981162-3981311,3981777-3981932,
3982289-3982405,3982759-3982839,3983338-3983478
Length = 844
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGW 218
V+FSP P LA S+D T R+WD + T HS L + P + + C
Sbjct: 655 VRFSPSIPR-LATSSFDKTVRVWDADNQGYSIRTFTGHSASVMSLDFHPNKDDLICSCDG 713
Query: 219 DSLVHVFT 242
D+ + ++
Sbjct: 714 DNEIRFWS 721
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLA 206
+SP + A+ S D T IWD++ G P ++R H+ ++W+ L +A
Sbjct: 271 WSPTEADIFASCSADRTISIWDIRTGKKPCISVRAHNADVNVISWNRLASCMIA 324
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDL 113
+ V++SPH PS LA S D IWDL
Sbjct: 356 ITSVEWSPHEPSTLAVSSADHQLTIWDL 383
>11_01_0204 -
1612505-1612636,1612809-1612926,1613050-1613162,
1613640-1613712,1613797-1613936,1614059-1614129,
1614262-1614430,1614625-1614690,1615081-1615179,
1615298-1615471,1615745-1615823,1615929-1616035,
1616395-1616439
Length = 461
Score = 35.5 bits (78), Expect = 0.036
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLA 206
+SP + A+ S D T IWD++ G P ++R H+ ++W+ L +A
Sbjct: 271 WSPTEADIFASCSADRTISIWDIRTGKKPCISVRAHNADVNVISWNRLASCMIA 324
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDL 113
+ V++SPH PS LA S D IWDL
Sbjct: 356 ITSVEWSPHEPSTLAVSSADHQLTIWDL 383
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 129 PLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTPRS 251
P++ H + Y + WSPL +L + +H++ P S
Sbjct: 220 PVKIFGSHKDEGYAIDWSPLVTGRLVSGDCNKCIHLWEPTS 260
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -3
Query: 334 IRMHAPDVLSCRPRLHVLYVGEHRPSRSERGVNTCTSESQPQSASWCGRSGLHASPYVNS 155
+R+ P V P LH + + ++ T E Q S ++ R+G + PY+
Sbjct: 28 LRVPPPHVAQRLPHLHAHSLASSAALALQLNAHSSTKEQQSSSCNYSSRAGCYLHPYLKL 87
Query: 154 EWCRIVSKGSQPRFR 110
+ GS P FR
Sbjct: 88 KTSAATCFGSLPPFR 102
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V R F + +A+ S D IW G D +ET+ H+ ++W+P PH LA
Sbjct: 447 VIRSCFGGSEQAFIASGSEDSQIYIWHRATG-DLIETLPGHTGTVNCVSWNPANPHMLAS 505
Query: 210 CGWDSLVHVF 239
D + ++
Sbjct: 506 ASDDHTIRIW 515
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +3
Query: 12 AGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSP 185
AG AV V+FSP +LA+ S D R+W P+ + H E LA+SP
Sbjct: 16 AGHRRAVSAVKFSPDG-RLLASASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSP 72
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSE 158
FSPH ++LA+ S+D T R+W+++ G C L + HSE
Sbjct: 121 FSPHG-NMLASGSFDETVRVWEVRSGRC--LRVLPAHSE 156
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 34.3 bits (75), Expect = 0.083
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSEFTYGLAWSPLRPHQLA 206
VR +SP +LA S+D TT IW+ G + + T+ H ++WS LA
Sbjct: 75 VRSCAWSPDG-KLLATASFDSTTAIWEYSGGDFECVATLEGHENEVKSVSWS-ASGSLLA 132
Query: 207 DCGWDSLVHVFTPRSLREGRC 269
C D V ++ + E C
Sbjct: 133 TCSRDKSVWIWEMQPGNEYEC 153
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 34.3 bits (75), Expect = 0.083
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHH 152
G + AV V+F S + LA+ S D T R+WD+K C P+ T R H
Sbjct: 557 GHKKAVSYVKFL--STNELASASTDSTLRLWDVKENC-PVRTFRGH 599
>07_03_1546 +
27602598-27602917,27602995-27603052,27603130-27603252,
27603896-27603992,27604095-27604131,27604244-27604349,
27604547-27604604,27604705-27604802,27604911-27605030,
27605622-27605667,27606336-27606522,27606747-27607263,
27607361-27607453,27608101-27608286,27608364-27608574,
27609263-27609387,27609518-27609664,27610114-27610236,
27610445-27610799,27611076-27611305,27611785-27611877
Length = 1109
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 21 ECAVRRVQFSPHSPSVLAAVSYDFTT---RIWDLKRGCDPLETIRHHSEFTYGLAWSPLR 191
+C+V +Q++P + L S D + R+WD+++ P+ HS+ ++W P
Sbjct: 220 KCSV--LQWNPDMSTQLIVASDDDNSPSLRVWDVRKTISPVREFVGHSKGVIAMSWCPYD 277
Query: 192 PHQLADCGWDS 224
L C D+
Sbjct: 278 SSYLLTCSKDN 288
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCD-----PLETI--RHHSEFTYGLAWSPLRPH 197
++FS +P+ LA+ + IWDLK + PL+++ +E +Y L W+P H
Sbjct: 130 LEFSELTPNRLASGAEQGELCIWDLKNPSEPVVFPPLKSVGSSAQAEISY-LTWNPKFQH 188
Query: 198 QLADCGWDSLVHVFTPRS 251
LA + + V+ R+
Sbjct: 189 ILATASSNGMTVVWDLRN 206
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSE 158
F+P + S +A+ +D T RIWD+K G C + I HSE
Sbjct: 140 FNPQTNSTVASGGFDCTVRIWDVKSGRC--VRAIDAHSE 176
>12_02_0111 - 13749387-13749634,13750319-13750472
Length = 133
Score = 32.3 bits (70), Expect = 0.34
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Frame = -3
Query: 154 EWCRIVSKGSQPRFRSQILVVKSYETAANTEGE--CGENC--TRRTAHSH----PAPRA 2
+W ++ S G + + RS+ +V+ A +T+ E CG +C R AHSH P+P A
Sbjct: 53 KWAKLPSLGKKHQSRSRSVVIFGRRVATSTKVEAFCGADCIRLRAVAHSHGSAAPSPAA 111
>09_06_0328 +
22365308-22365415,22365743-22366018,22366166-22366417,
22366542-22366939,22367028-22368021,22368199-22368409,
22368515-22368749,22368874-22368996,22369190-22369310,
22369416-22369625
Length = 975
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSEFTYGLAWSPL 188
+ +SP S LA+ S D T IW + G C + +R HS G+ W P+
Sbjct: 131 LNWSPDD-STLASGSLDNTVHIWSMANGICTAV--LRGHSSLVKGVTWDPI 178
>06_02_0200 -
12946139-12946282,12947636-12947842,12949506-12949629,
12950167-12950369,12950922-12951620,12951723-12951784,
12952395-12952404,12954905-12957631
Length = 1391
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = +3
Query: 66 VLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQ-LADC----GWDSLV 230
VL + S+D T R+WDL G L + HH + P HQ DC G D +V
Sbjct: 539 VLISGSFDSTIRVWDLDAG-TILSVMHHHVAPVKQIMLPPAWTHQPWDDCFLSVGEDGIV 597
Query: 231 HVFTPRSLREGRCSP 275
+ + +++R R P
Sbjct: 598 ALVSLQTMRVERMFP 612
>04_03_0368 + 15004949-15005659,15005789-15005848
Length = 256
Score = 31.9 bits (69), Expect = 0.45
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = -2
Query: 215 AAVGELVRAQRAPRQ--PVRELRVVPDRLQGVAAALQVPDSRGKVVRDGGQHGGRVRREL 42
AA G L R +R RQ RE R G AAA Q PD G+ + GG R
Sbjct: 7 AAPGRLGRRRRPGRQIRQGREGRRSGAEPAGAAAAAQPPDPAGREGKRGGAEPARAAAAA 66
Query: 41 HPP 33
PP
Sbjct: 67 RPP 69
>02_03_0367 + 18220099-18220905
Length = 268
Score = 31.9 bits (69), Expect = 0.45
Identities = 26/62 (41%), Positives = 29/62 (46%)
Frame = -2
Query: 218 PAAVGELVRAQRAPRQPVRELRVVPDRLQGVAAALQVPDSRGKVVRDGGQHGGRVRRELH 39
PAA+ L A R Q V +V LQG AA P+ R GG GGR RR H
Sbjct: 35 PAAILALATALRPEDQQVLAY-LVTRCLQGAGAAHH-PEREHPPARGGG--GGRRRRGAH 90
Query: 38 PP 33
PP
Sbjct: 91 PP 92
>02_02_0017 -
6131265-6131284,6131654-6131774,6132011-6132146,
6132423-6132529,6133006-6133099,6133199-6133395,
6134401-6134472,6135128-6135304,6135393-6135467,
6135557-6135697,6136439-6136627,6136969-6137034,
6137118-6137268,6137596-6137664,6138751-6138899,
6138969-6139100,6139198-6139523,6139599-6139635,
6139765-6139803,6140196-6140250,6140363-6140424,
6140512-6140532,6140820-6140822
Length = 812
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
+R V P P VL++ S D ++WD +G + HS + + ++P + A
Sbjct: 115 IRCVAVHPTQPFVLSS-SDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 173
Query: 210 CGWDSLVHVFT 242
D V V++
Sbjct: 174 ASLDRTVKVWS 184
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSE 158
V +V F+P + A+ S D T ++W L DP T+ HS+
Sbjct: 158 VMQVTFNPKDTNTFASASLDRTVKVWSL-GSPDPNFTLDGHSK 199
>02_02_0016 -
6118739-6118758,6119116-6119236,6119478-6119613,
6119887-6119993,6120316-6120409,6120509-6120705,
6121872-6121943,6122597-6122773,6122862-6122936,
6123027-6123167,6123837-6124025,6124415-6124480,
6124564-6124714,6125040-6125200,6126279-6126410,
6126508-6126833,6126906-6126942,6127056-6127088,
6127500-6127554,6127666-6127753,6127817-6127862
Length = 807
Score = 31.5 bits (68), Expect = 0.59
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
+R V P P VL++ S D ++WD +G + HS + + ++P + A
Sbjct: 129 IRCVAVHPTQPFVLSS-SDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 187
Query: 210 CGWDSLVHVFT 242
D V V++
Sbjct: 188 ASLDRTVKVWS 198
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSE 158
V +V F+P + A+ S D T ++W L DP T+ HS+
Sbjct: 172 VMQVTFNPKDTNTFASASLDRTVKVWSL-GSPDPNFTLDGHSK 213
>08_01_0255 +
2089543-2089583,2089696-2090089,2090797-2090862,
2091067-2091189,2091605-2091685,2091765-2091857,
2092103-2092178,2092255-2092334,2092433-2092504,
2092937-2092996,2093177-2093273,2093498-2093561,
2093706-2093765,2093942-2094035
Length = 466
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/80 (20%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +3
Query: 27 AVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPL--ETIRHHSEFTYGLAWSPLRPHQ 200
+V ++ P +PS++ + S D + ++W+++ G L + H G+ + ++
Sbjct: 216 SVNEIKSQPSNPSLIISASKDESIKLWNVQTGILILVFGGVGGHRHEVLGVDFHTSDIYR 275
Query: 201 LADCGWDSLVHVFTPRSLRE 260
CG D+ V +++ + E
Sbjct: 276 FLSCGMDNTVRIWSMKEFWE 295
>01_05_0653 -
23948911-23948937,23949031-23949141,23949361-23949441,
23949865-23949984,23950088-23950252,23950344-23950493,
23950565-23950674,23951401-23951518,23951597-23951827,
23952345-23952524,23953639-23953908,23954930-23954979,
23955213-23955288,23955396-23955483,23956010-23956101,
23956200-23956529,23957484-23957593,23957810-23957907,
23959538-23959566
Length = 811
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/67 (29%), Positives = 27/67 (40%)
Frame = +3
Query: 69 LAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTPR 248
LA S+D T R+WD L T HS L + P + + C D V +
Sbjct: 628 LATSSFDKTIRVWDANNPEYSLHTFIGHSTSVVSLDFHPNKEDIICSCDSDGEVRCW--- 684
Query: 249 SLREGRC 269
S+ G C
Sbjct: 685 SIDNGSC 691
>06_01_0320 -
2320317-2320336,2320791-2320902,2321092-2321236,
2321353-2321459,2321572-2321665,2321752-2321948,
2322311-2322382,2322504-2322618,2323060-2323176,
2323253-2323344,2323445-2323621,2323746-2323820,
2323911-2324051,2324671-2324859,2325298-2325363,
2325445-2325595,2325718-2325786,2326293-2326441,
2326526-2326657,2326756-2327081,2327167-2327203,
2327926-2327980,2328242-2328309,2328464-2328466
Length = 902
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSE 158
V +V F+P + A+ S D TT+IW L DP T+ H +
Sbjct: 140 VMQVTFNPKDTNTFASASLDRTTKIWSL-GSPDPNFTLDGHQK 181
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/71 (22%), Positives = 31/71 (43%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
+R V P P VL++ S D ++WD +G + HS + + ++P + A
Sbjct: 97 IRCVAVHPTLPYVLSS-SDDMLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFAS 155
Query: 210 CGWDSLVHVFT 242
D +++
Sbjct: 156 ASLDRTTKIWS 166
>09_02_0152 +
5040845-5041001,5042645-5042757,5043556-5043816,
5043954-5044058,5044726-5044791,5044882-5044999,
5045018-5045103,5045900-5046424,5046534-5047115,
5047203-5047385,5049326-5049392,5049685-5049791,
5049977-5050076,5050228-5050313,5050394-5050485,
5050591-5050705,5050792-5050983
Length = 984
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/82 (21%), Positives = 32/82 (39%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
+R + +S +S +L D + +WD + ++ HS G+ SP +A
Sbjct: 179 LRVLDYSRNSRHILVTAGDDGSVHLWDTTARTPKVSWLKQHSAPISGVCISPSSDKIIAT 238
Query: 210 CGWDSLVHVFTPRSLREGRCSP 275
G D ++ S R P
Sbjct: 239 VGLDKKLYTLDSGSRRPTHTIP 260
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 174 AWSPLRPHQLADCGWDSLVHVFTPRSLREGR-CSPTYNTCSRGL 302
+W P+R H + D GW +L + S+ EG+ +Y+ C G+
Sbjct: 351 SWEPVRCHDVVDMGWSNLADL----SIYEGKLLGCSYHECRVGV 390
>09_06_0121 +
20975132-20975755,20976834-20976977,20977333-20977457,
20978090-20978194,20978755-20978989
Length = 410
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEF---TYGLAWSPLRPHQ 200
V + F+P + +LA+ S D T +++DL++ L H + + W+P
Sbjct: 257 VNSLSFNPFNEWILASASGDATIKLFDLRKLSRSLHVFDSHDSCRGEVFQVEWNPNLETV 316
Query: 201 LADCGWDSLVHVF 239
LA D V ++
Sbjct: 317 LASSAADKRVMIW 329
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDL-----KRGCDPLETIRHHSEFTYGLAWSPLRP 194
V R + P P +A + ++ L K G D + +R H YGLAWSP++
Sbjct: 118 VNRARCMPQRPYTVATKTCVDEVHVYHLGDGGEKGGADVV--LRGHEAEGYGLAWSPMKE 175
Query: 195 HQLADCGWDSLV 230
L +D +
Sbjct: 176 GLLLSGSYDKKI 187
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 18 CECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKR 119
C V +V+++P+ +VLA+ + D IWD+ R
Sbjct: 300 CRGEVFQVEWNPNLETVLASSAADKRVMIWDVSR 333
>02_05_0322 - 27926619-27927686
Length = 355
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 60 PSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAW 179
P + S D T IWD++RG + I H + + +AW
Sbjct: 156 PRRIGTASIDTTCTIWDIERGVVETQLIA-HDKAVHDIAW 194
>08_01_0253 +
2072766-2072954,2073526-2073591,2073755-2073877,
2073913-2074017,2074555-2074635,2074715-2074807,
2075023-2075098,2075182-2075261,2075359-2075430,
2075553-2075612,2075775-2075871,2076137-2076200,
2076303-2076362,2076539-2076608
Length = 411
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 27 AVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPL--ETIRHHSEFTYGLAWSPLRPHQ 200
++ ++ PS++ + S D + R+W++ G L H + + P ++
Sbjct: 169 SINEIRTQALKPSLIISASKDESVRLWNVHTGICILIFAGAGGHRNEVLSVDFHPSDIYR 228
Query: 201 LADCGWDSLVHVFT 242
+A CG D+ V +++
Sbjct: 229 IASCGMDNTVKIWS 242
>08_01_0190 - 1583044-1583802
Length = 252
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -2
Query: 176 RQPVRELRVVPDRLQGVAAALQVPDSRGKVVRDGGQHGGRVRRE 45
R V+ R+ R GVAA +Q R V GG GGR RRE
Sbjct: 23 RVSVKPWRLWWRRCAGVAAVIQSKIHRRAVRWPGGHGGGRRRRE 66
>08_02_0014 +
11255063-11255167,11256589-11256858,11257882-11258285,
11259011-11259242
Length = 336
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDL----KRGCDPLETIRH 149
+ + F P + +LA S D T +WDL K+G + L + H
Sbjct: 197 INSIDFHPENTYMLATSSRDGTACMWDLRTMKKKGAESLVVLEH 240
>06_01_0323 +
2339916-2340065,2340535-2340732,2341158-2341307,
2341596-2341649
Length = 183
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = -2
Query: 218 PAAVGELVRAQRAPRQPVRELRVVPDRLQGVAAALQVPDSRGKVVRDGGQHGGR 57
PAAVGEL R + P + + D G + L+V + G R+G HG R
Sbjct: 15 PAAVGELARRAFSFGHPHYKPSISNDGWSGSSGTLEVAGAYG---RNGPYHGAR 65
>02_01_0054 - 404464-405152,406087-406618
Length = 406
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 34 GGCSSRRTRPPCWPPSRTTLP 96
GG +R+ PPC PP + LP
Sbjct: 53 GGAGARQLMPPCSPPPQQELP 73
>10_08_0426 - 17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -3
Query: 277 VGEHRPSRSERGVNTCTSESQPQSASWCGRSGLHASPYVNSEWCRIVSKGSQPRFRSQIL 98
VG H PS SER + S + S G A P+ NS+ IVS S+ F I+
Sbjct: 1080 VGSHSPSHSERNEARVLTGSVLTATSKLG----SAVPFDNSQ-VLIVSADSREGFHGLII 1134
Query: 97 VVK-SYETAANTEG 59
+ S++T N +G
Sbjct: 1135 NKRLSWDTFKNLDG 1148
>05_03_0575 - 15643819-15644295
Length = 158
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 95 GKVVRDGGQHGGRVRRELHPPHSTLAPC 12
G+V R GG+ G HP TL PC
Sbjct: 7 GRVERGGGRGGRACGHRSHPSPPTLCPC 34
>03_05_0697 +
26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 271 EHRPSRSERGVNTCTSESQPQSASWCGRSGLHASPYVNSEWCRIVSKGSQ 122
EHR R ++GV Q S ++CG + + P + + S+G Q
Sbjct: 604 EHREKRRKKGVEILKLSVQKLSITYCGDANVVNMPVADPKRVNYGSQGGQ 653
>02_04_0593 +
24177897-24178182,24178442-24178509,24178617-24178840,
24179221-24179304,24180183-24180396,24181242-24181418,
24181507-24181626,24181854-24181998,24182055-24182065,
24182222-24182314
Length = 473
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = -2
Query: 176 RQPVRELRVVPDRLQGVAAALQVPDSRGKVVRDGGQHGGRVRRELH 39
R P E+ ++P L + P S K+VR+G G R ELH
Sbjct: 127 RNPEGEVYMLPADLMRAVVPV-FPPSESKIVREGSLRGERNPGELH 171
>11_06_0627 + 25633537-25633884,25635246-25635869
Length = 323
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V V +SP +LA S D T ++D R L + H + +SP+ PH L
Sbjct: 163 VLSVAWSPDG-KLLACGSMDGTIAVYDAVR-MKFLHHLEGHHMPVRSMVFSPVDPHVLFT 220
Query: 210 CGWDSLVHVF 239
D +H++
Sbjct: 221 ASDDCHIHIY 230
>06_03_0967 - 26395537-26396590,26400918-26401111
Length = 415
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWS 182
G + AV ++F+P + +V+A+ S+D +W + C +R H L W+
Sbjct: 123 GHQSAVYCMKFNP-AGTVIASGSHDKDIFLWYVHGDCKNYMVLRGHKNAVLDLQWT 177
>04_04_0475 +
25500470-25500609,25500697-25500794,25502806-25502915,
25502998-25503293,25503399-25503474,25503577-25503688,
25503955-25504004,25504090-25504392,25504446-25504547,
25505463-25505635,25505745-25505917,25505997-25506106,
25506180-25506329,25506726-25506881,25507000-25507116,
25507277-25507474,25507809-25507952
Length = 835
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADC 212
V+F P+S + LA S+D T ++W+ L T H L + P + L C
Sbjct: 606 VRFRPNS-NQLATSSFDRTIKLWNAADPGFSLHTFAGHCSGITSLDFHPKKTDLLCSC 662
>02_05_1194 -
34881450-34881593,34882023-34882220,34882522-34882638,
34882753-34882908,34883192-34883341,34883418-34883527,
34883589-34883730,34883836-34884054,34887004-34887099,
34887187-34887489,34887575-34887624,34888003-34888114,
34888204-34888279,34888389-34888684,34888763-34888872,
34889071-34889120,34890439-34890488,34890636-34890816,
34890901-34890932
Length = 863
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADC 212
V+F P+S S LA S+D T ++W+ L T H+ L + P + L C
Sbjct: 634 VRFRPNS-SQLATSSFDRTIKLWNAADPGFCLHTFVGHNVQVTSLDFHPKKTDLLCSC 690
>02_04_0084 -
19579104-19579230,19580323-19580417,19580578-19580719,
19581155-19581189,19581493-19581632,19581678-19581770,
19584007-19584244
Length = 289
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
Frame = -3
Query: 430 SFKVFVKCLSV----EYSFLVVLWWNFIY 356
SF+V CLS E SFL ++ WN+ Y
Sbjct: 236 SFQVIPSCLSAARFKEISFLSIVLWNYFY 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,792,633
Number of Sequences: 37544
Number of extensions: 347615
Number of successful extensions: 1248
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1245
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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