Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060784.seq
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7939| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 46 3e-05
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 43 2e-04
SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18) 41 0.001
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_50887| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06) 31 0.60
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 31 0.80
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40) 31 1.1
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 31 1.1
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_32712| Best HMM Match : PAN (HMM E-Value=0.18) 30 1.8
SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 29 3.2
SB_41590| Best HMM Match : WD40 (HMM E-Value=6.5e-13) 29 4.2
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_30492| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_19933| Best HMM Match : MR_MLE_N (HMM E-Value=8.5) 29 4.2
SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10) 29 4.2
SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 28 5.6
SB_42279| Best HMM Match : WD40 (HMM E-Value=2.2e-10) 28 5.6
SB_433| Best HMM Match : DUF883 (HMM E-Value=0.75) 28 5.6
SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10) 28 5.6
SB_57227| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_52972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 28 7.4
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36) 28 7.4
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42) 28 7.4
SB_57913| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.8) 27 9.8
SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32) 27 9.8
>SB_7939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Frame = +3
Query: 48 SPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLA------D 209
SPH +++A+ SYDFT + WD PLETI HHSEF GL ++ +P Q++ +
Sbjct: 150 SPHQGNIIASCSYDFTIKTWDTTSTLAPLETIEHHSEFATGLDFNIHQPGQVSVFNYSFN 209
Query: 210 CGWDSLVHVFTP-RSLREGRC-SPTYNTCSRGL 302
C +D + F P R L R + +T SRG+
Sbjct: 210 CQFDPNLDRFKPHRGLLVRRYGNGVQSTVSRGI 242
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/71 (29%), Positives = 40/71 (56%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGW 218
V++ P++ ++L + +YD T ++WD+ + T+ H+E + LAWS QLA
Sbjct: 116 VRYHPNAENLLTSAAYDLTVKLWDI-NAAKSVITLEGHNEQVFSLAWS-ADGKQLATFSR 173
Query: 219 DSLVHVFTPRS 251
D + ++ PR+
Sbjct: 174 DKKLRIYDPRA 184
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + F+P+S +LA S D T +WDL+ L + H + + + WSP LA
Sbjct: 324 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS 383
Query: 210 CGWDSLVHVF 239
G D +HV+
Sbjct: 384 SGTDRRLHVW 393
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKR 119
+VQ+SPH+ ++LA+ D +WDL +
Sbjct: 370 QVQWSPHNETILASSGTDRRLHVWDLSK 397
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Frame = +3
Query: 21 ECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRG---------CDPLETIRHHSEFTYGL 173
E V R +F P +P ++A + ++D + C P ++ H++ YGL
Sbjct: 190 EGEVNRARFMPQNPCIIATKTPSADVLVFDYTKHPSKPDPNGECSPDLRLKGHTKEGYGL 249
Query: 174 AWSP 185
+W+P
Sbjct: 250 SWNP 253
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCG 215
+V+++ +VLA S+D RIWDL++G P+ I H +G+ WS LA C
Sbjct: 44 QVKWNKEDRNVLAT-SHDGDVRIWDLRKGNTPVVYITAHLSKIHGVDWSRTSGTALATCS 102
Query: 216 WDSLVHVFTPRSLRE 260
D+ V ++ + R+
Sbjct: 103 NDASVKLWNTENPRQ 117
>SB_5612| Best HMM Match : WD40 (HMM E-Value=4.4e-18)
Length = 736
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + +SPH P L SYD + ++WD++ P+ R H + WS L P +
Sbjct: 25 VTALSWSPHHPDRLVTSSYDGSAQVWDVETN-QPIANYRGHVGRVMSVCWSYLDPDVVFS 83
Query: 210 CGWDSLV 230
G D V
Sbjct: 84 GGEDGTV 90
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 72 AAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTPRS 251
++ SYD T R+WD++RG L+ + H E Y +++SP LA +D VH+++ ++
Sbjct: 307 SSASYDTTVRLWDVERG-GCLQVLSKHHEPVYTISFSP-DGRYLASGSFDKRVHIWSTQT 364
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 33 RRVQFSPHSPSVLAAVSYDF---TTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQL 203
+ V++ P + + + S D ++WDL+ P++ + HS +AW P P L
Sbjct: 218 KAVEWHPDTATQMVIASEDDRYPVLQMWDLRFATSPMKVLEGHSRGILSIAWCPQDPDLL 277
Query: 204 ADCGWDSLVHVFTPRSLREG 263
C D+ + + P G
Sbjct: 278 MSCAKDNRILCWNPNEQTAG 297
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 27 AVRRVQFSPHSPSVLAAVSYDFTTRIWDL 113
AV+ + F+P P++LA+ + D IWD+
Sbjct: 125 AVQALDFNPFQPNLLASGASDSEIFIWDM 153
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Frame = +3
Query: 27 AVRRVQFSPHSPSVLA--AVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLR--- 191
+V R+++ P +A A+ DF +WD++R P T H + G+ W
Sbjct: 466 SVSRIKWRPQKKYQIASCALLVDFDIHVWDIRRPYIPYATFSEHKDVPTGIMWRQTSRGK 525
Query: 192 -PHQLADCGWDSLV--HVFT 242
PH C D + HVF+
Sbjct: 526 DPHVFLSCSKDCTLYQHVFS 545
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRP 194
G E V + FS + L +V+ D ++WD++ G + L+T+ H + AW+P+
Sbjct: 1262 GHEDRVTSLAFSKNGKR-LVSVALDKKLKVWDVESG-NLLDTLTGHDGYPVCCAWNPVDN 1319
Query: 195 HQLADCG 215
+A CG
Sbjct: 1320 TMVATCG 1326
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSP 185
++FSP+ ++A Y +WDL+ C L + H F +SP
Sbjct: 1597 IRFSPNDKQIIAVGEYSCGVLMWDLETEC-VLTALGGHDMFCQYTEFSP 1644
>SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 35.1 bits (77), Expect = 0.049
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 27 AVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLA 206
A+R +QFS ++LA+VS D + +WD + H LA+SP L
Sbjct: 127 AIRGLQFSHFKKALLASVSDDGASNLWDTNSRKLVTSFVNEHKAPATALAFSPANEMLLT 186
Query: 207 DCGWDSLV 230
G D +
Sbjct: 187 SVGLDKKI 194
>SB_50887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 63 SVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPH 197
+VLA+ S D + +WDL + + + HH + L + P PH
Sbjct: 2 NVLASASADHSVILWDLNH-AEAVHVLGHHKDKVQSLEFHPYEPH 45
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +3
Query: 69 LAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTP 245
LA+ S D IW +K P+ + H+ + W+PL P +A D V ++ P
Sbjct: 220 LASGSEDHQVYIWHVKNE-RPIAVLCGHTRTVNCVTWNPLVPSMMASASDDGTVRIWGP 277
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 63 SVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPL 188
S LA+ S D T IW+ ++ + ++ I+ H+ G+ W P+
Sbjct: 101 SFLASGSVDNTVTIWNAQKFPEVIQIIKGHTGLVKGVTWDPV 142
>SB_13850| Best HMM Match : WD40 (HMM E-Value=3.1e-06)
Length = 229
Score = 31.5 bits (68), Expect = 0.60
Identities = 11/40 (27%), Positives = 25/40 (62%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSE 158
V++ P++ ++L + +YD T ++WD+ + T+ H+E
Sbjct: 190 VRYHPNAENLLTSAAYDLTVKLWDI-NAAKSVITLEGHNE 228
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWS 182
V++ P + ++L + S+D IW+L+ + + I +H+ Y ++W+
Sbjct: 71 VRWHPVASNILLSSSHDLKIVIWNLET-AEAFQIIENHTAIVYSVSWN 117
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWS 182
V++ P + ++L + S+D IW+L+ + + I +H+ Y ++W+
Sbjct: 135 VRWHPVASNILLSSSHDLKIVIWNLET-AEAFQIIENHTAIVYSVSWN 181
>SB_51303| Best HMM Match : WD40 (HMM E-Value=3.5e-40)
Length = 400
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 63 SVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFT 242
S++A + D + DL+ G +R H+ ++WSPL + LA G D+ V ++
Sbjct: 157 SLVATANEDSRVYLCDLRTG-SASHILRGHATAVLSVSWSPLNQYLLATGGRDNKVLLWD 215
Query: 243 PR 248
R
Sbjct: 216 VR 217
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGW 218
+ +SP S+ A D + ++ +K + + H +A+SP P LA
Sbjct: 181 LDWSPLDSSIFATGFEDGSIHVYSIKDTTKIIFSYTPHGRAVNRVAFSPRSPEWLASVSD 240
Query: 219 DSLVHV 236
D+LVHV
Sbjct: 241 DTLVHV 246
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKR 119
G + V V F+P P +L + S D T R+W +R
Sbjct: 475 GHQNVVNCVAFNPRDPDMLVSASDDHTLRVWKSRR 509
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +3
Query: 12 AGCECAVRRVQFSPH-SPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPL 188
AG V F+P + +L + + D + ++WD++ + + H + AWSP
Sbjct: 40 AGHTTGVWTCAFNPERTGDILCSGADDGSLKLWDIRSNSVVMSLVGGHDDRVKSCAWSP- 98
Query: 189 RPHQLADCGWDSLVHVFTPR 248
+A D V ++ PR
Sbjct: 99 NGEYVASSSADGRVTLWEPR 118
>SB_32712| Best HMM Match : PAN (HMM E-Value=0.18)
Length = 542
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 570 WKLLLEMCGIFSIXLEMWYRLKSXCRDGTQSVSNRNCSKRNGTS 439
W + E+ G+ S L + + C+D T+ +S CSK+ ++
Sbjct: 493 WATMDELLGVVSRYLPRYEAVLRTCKDTTEVLSTTKCSKQRAST 536
>SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -2
Query: 206 GELVRAQRAPRQPVREL-RVVPDRLQGVAAALQVPDSRGKVVRDGG---QHGGRVRRE 45
G VR R + VR+ RVV D + V A +V G+VVRD G Q GRV +
Sbjct: 11 GSAVRGVRDAERVVRDAGRVVRDAGRVVRDAGRVESDAGRVVRDAGRVMQDAGRVESD 68
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 RGAGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLK-RGCDPLETI 143
R G V V+F+ +V+ + SYD T R WD + R +P++ I
Sbjct: 650 RYRGHTSRVNCVKFNQPDSTVIISGSYDSTIRCWDCRSRSQEPVQVI 696
>SB_41590| Best HMM Match : WD40 (HMM E-Value=6.5e-13)
Length = 242
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 54 HSPSVLAAVSYDFTTRIWDLKRG--CDPLETIRHHSEFTYGLAWSPL 188
+ PS++A SYD +IW+ G L T ++HS T G+A PL
Sbjct: 185 YHPSLVATSSYDGCVKIWNADTGHMSCLLNTNKYHSN-TAGVAAIPL 230
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 51 PHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAW 179
P S L + S+D + ++WDL+ + +IR H + W
Sbjct: 203 PMGESRLCSGSWDNSVKVWDLRGSIVEMTSIREHRAAVLCMEW 245
>SB_30492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 9 GAGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHS 155
G E + V+FSP S S L S+D + R++D++ D + +HS
Sbjct: 12 GQAPEDGISAVKFSPTSSSFLLVSSWDTSVRLYDVQN--DDMRLKYNHS 58
>SB_19933| Best HMM Match : MR_MLE_N (HMM E-Value=8.5)
Length = 207
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRI-WDLKRG 122
++ FSPHSP L+A S D+ + + + +K G
Sbjct: 159 KINFSPHSPVQLSATSVDYVSSLRFSMKDG 188
>SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10)
Length = 283
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRP 194
V SP+ ++ D T R++ + + PL ++ + + + + WSP+RP
Sbjct: 146 VNCSPYHRNLFLTCGTDGTIRLYTMLQA-KPLLSLEPAAGYLFAIRWSPVRP 196
>SB_3948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRI-WDLKRG 122
++ FSPHSP L+A S D+ + + + +K G
Sbjct: 1064 KINFSPHSPIQLSATSVDYVSSLRFSMKDG 1093
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +3
Query: 42 QFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSP 185
+F +LA S+D T ++WD+ + + + Y L+W+P
Sbjct: 376 KFKADDADMLATASFDGTVKVWDVDT-LSGVHSSPGNEGIIYALSWAP 422
>SB_42279| Best HMM Match : WD40 (HMM E-Value=2.2e-10)
Length = 291
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +3
Query: 42 QFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSP 185
+F +LA S+D T ++WD+ + + + Y L+W+P
Sbjct: 214 KFKADDADMLATASFDGTVKVWDVDT-LSGVHSSPGNEGIIYALSWAP 260
>SB_433| Best HMM Match : DUF883 (HMM E-Value=0.75)
Length = 386
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKRGCD 128
++ FSPHSP L+ S D+ + + + CD
Sbjct: 338 KINFSPHSPIQLSTTSTDYVSSLRFSIKDCD 368
>SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10)
Length = 841
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCD 128
+ F P + ++A+ RIWDLK GC+
Sbjct: 34 IAFHPSADELVASGCLGGEVRIWDLKGGCE 63
>SB_57227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRI-WDLKRGC 125
++ F+PHSP L+A S D+ + +K GC
Sbjct: 481 KINFAPHSPIQLSAASVDYVSSFRLRVKDGC 511
>SB_52972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 229 TSESQPQSASWCGRSGLHASPYVNSEWCRIVSKGSQPRFRSQI 101
TS+ +P + CG+ GL N C+++ K S+ S I
Sbjct: 294 TSDHKPHGCNHCGKGGLSLRASDNYNDCQVLDKESRQTICSAI 336
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCD----PLETIRHH 152
FS +S VLA+ S D T R+WD+++G + PL+ +H
Sbjct: 20 FSANS-RVLASCSGDKTARLWDVEKGTELAQSPLDGHNYH 58
>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
Length = 885
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 51 PHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGL 173
P S SVL + S D ++W+L D L TI H F GL
Sbjct: 76 PRSLSVLLSGSCDGEVKLWNLPTK-DCLRTITAHKGFVRGL 115
>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
Length = 198
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCD----PLETIRHH 152
FS +S VLA+ S D T R+WD+++G + PL+ +H
Sbjct: 20 FSANS-RVLASCSGDKTARLWDVEKGTELAQSPLDGHNYH 58
>SB_57913| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.8)
Length = 1101
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 102 IWDLKRGCDPLETIRHHSEFTYGLAWSPLR 191
+WDL+ G D +T RH SE LA S +R
Sbjct: 58 LWDLEYGFDAGKTSRHFSERKIELAESRVR 87
>SB_21573| Best HMM Match : WD40 (HMM E-Value=4.1e-32)
Length = 458
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 LAAVSYDFTTRIWDLKRGCDPLETI-RHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTP 245
LA+ S+D T ++ L + L+ I + H+E L W P P D + ++
Sbjct: 48 LASGSFDRTASVFVLDKDRLTLDHIYKGHNESVDQLCWHPSNPDLFVTASGDKTIRIWDA 107
Query: 246 RSL 254
R L
Sbjct: 108 RIL 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,018,061
Number of Sequences: 59808
Number of extensions: 379321
Number of successful extensions: 1222
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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