Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060784.seq
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    27   0.50 
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    25   2.0  
AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical prote...    24   3.6  
AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage ...    24   3.6  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    24   4.7  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    24   4.7  
DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.    23   6.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   6.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   6.2  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 183 PLRPHQLADCG-WDSLVHVFTPRSLREGRC 269
           P  P++L + G W    HV T R+L E RC
Sbjct: 236 PTPPNRLTNNGYWQLRPHVLTERNLEEFRC 265


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +1

Query: 46  SRRTRPPCWPPSRTT 90
           SR TRP  WP SR T
Sbjct: 280 SRSTRPTSWPRSRPT 294


>AJ973473-1|CAJ01520.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 252 LREGRCSPTYNTCSRGLQDKTSGACIRIVTRWSSG*IK 365
           L +GRC+P  N   R L D     C +   +   G IK
Sbjct: 48  LDQGRCTPDGNELKRILPDALQTNCEKCSEKQRDGAIK 85


>AF437891-1|AAL84186.1|  127|Anopheles gambiae sensory appendage
           protein protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +3

Query: 252 LREGRCSPTYNTCSRGLQDKTSGACIRIVTRWSSG*IK 365
           L +GRC+P  N   R L D     C +   +   G IK
Sbjct: 48  LDQGRCTPDGNELKRILPDALQTNCEKCSEKQRDGAIK 85


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 219 DSLVHVFTPRSLREGRCSPTYNTCSRGLQDKTSGACIRIVTRWSSG*IK 365
           D L + +    + EGRC+P  N   + L +     C +   +  SG IK
Sbjct: 37  DRLFNNYFKCLMDEGRCTPDGNELKKILPEALQTNCEKCSEKQRSGAIK 85


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +3

Query: 219 DSLVHVFTPRSLREGRCSPTYNTCSRGLQDKTSGACIRIVTRWSSG*IK 365
           D L + +    + EGRC+P  N   + L +     C +   +  SG IK
Sbjct: 37  DRLFNNYFKCLMDEGRCTPDGNELKKILPEALQTNCEKCSEKQRSGAIK 85


>DQ004401-1|AAY21240.1|  153|Anopheles gambiae lysozyme c-7 protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -3

Query: 163 VNS-EWCRIVSKGSQPRFRSQILVVKSYETA 74
           +NS EWCR+  KG +   + + LV      A
Sbjct: 85  INSKEWCRVGYKGGKCNMKCEDLVTDDITNA 115


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 3   ARGAGCECA 29
           ARG GCECA
Sbjct: 335 ARGGGCECA 343


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 3   ARGAGCECA 29
           ARG GCECA
Sbjct: 335 ARGGGCECA 343


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,542
Number of Sequences: 2352
Number of extensions: 12688
Number of successful extensions: 80
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)