Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060784.seq
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 45 5e-05
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 45 5e-05
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 44 7e-05
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 38 0.008
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 33 0.13
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 32 0.30
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 31 0.93
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 31 0.93
Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 30 1.2
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 30 1.2
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 30 1.2
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 30 1.6
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical ... 30 1.6
AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical ... 29 2.1
U97406-3|AAC24292.1| 344|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC087232-1|AAK09079.2| 574|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 29 2.8
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 29 3.7
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 29 3.7
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 29 3.7
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 29 3.7
Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical p... 27 8.6
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + F+P+S +LA S D T +WDL+ L + H + + + WSP LA
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILAS 327
Query: 210 CGWDSLVHVF 239
G D +HV+
Sbjct: 328 SGTDKRLHVW 337
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKR 119
+VQ+SPH+ ++LA+ D +WDL +
Sbjct: 314 QVQWSPHNETILASSGTDKRLHVWDLSK 341
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 21 ECAVRRVQFSPHSPSVLAAVSYDFTTRIWD-LKRGC-------DPLETIRHHSEFTYGLA 176
E V R ++ P +++A S I+D LK +PL ++ H++ YGL+
Sbjct: 120 EGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLS 179
Query: 177 WSP 185
W+P
Sbjct: 180 WNP 182
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + F+P+S +LA S D T +WDL+ L + H + + + WSP LA
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILAS 327
Query: 210 CGWDSLVHVF 239
G D +HV+
Sbjct: 328 SGTDKRLHVW 337
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKR 119
+VQ+SPH+ ++LA+ D +WDL +
Sbjct: 314 QVQWSPHNETILASSGTDKRLHVWDLSK 341
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 21 ECAVRRVQFSPHSPSVLAAVSYDFTTRIWD-LKRGC-------DPLETIRHHSEFTYGLA 176
E V R ++ P +++A S I+D LK +PL ++ H++ YGL+
Sbjct: 120 EGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLS 179
Query: 177 WSP 185
W+P
Sbjct: 180 WNP 182
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
V + F+P+S +LA S D T +WDL+ L + H + + + WSP LA
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILAS 327
Query: 210 CGWDSLVHVF 239
G D +HV+
Sbjct: 328 SGTDKRLHVW 337
Score = 30.7 bits (66), Expect = 0.93
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKR 119
+VQ+SPH+ ++LA+ D +WDL +
Sbjct: 314 QVQWSPHNETILASSGTDKRLHVWDLSK 341
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 21 ECAVRRVQFSPHSPSVLAAVSYDFTTRIWD-LKRGC-------DPLETIRHHSEFTYGLA 176
E V R ++ P +++A S I+D LK +PL ++ H++ YGL+
Sbjct: 120 EGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLS 179
Query: 177 WSP 185
W+P
Sbjct: 180 WNP 182
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRP 194
G V + F+P S +LA S D T +WD++ + T++HH++ + +++SP
Sbjct: 262 GHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVSFSPHYE 321
Query: 195 HQLADCGWDSLVHVF 239
LA G D V V+
Sbjct: 322 TVLASSGSDDRVIVW 336
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDL-KRGCDPLET-------IRHHSEFTYGLAWSP 185
V R ++ PH+P ++A+ I+D K +P +T ++ H YG++WS
Sbjct: 122 VHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWSN 181
Query: 186 LRPHQLADCGWDSLV 230
R L G D ++
Sbjct: 182 TREGHLLTAGDDGMI 196
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDP 131
+V FSPH +VLA+ D +WD+ + DP
Sbjct: 313 QVSFSPHYETVLASSGSDDRVIVWDISKIQDP 344
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 66 VLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTP 245
V +V D +WDL++ L + H +E + ++P + LA D V ++
Sbjct: 236 VFGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNC-ITFNPFSEYILATGSVDKTVALWDM 294
Query: 246 RSLRE 260
R++R+
Sbjct: 295 RNMRK 299
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFT-TRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLA 206
++R+ ++ P +A + + +I D++ C+ L +R+H+ G+AW+P PH +
Sbjct: 270 LQRLSWNKQEPYFMALFAENSQEVQILDIRMPCNILCRLRNHTGPVNGIAWAPHSPHHIC 329
Query: 207 DCGWDS 224
G DS
Sbjct: 330 TAGDDS 335
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPL-ETIRHHSE--FTYGLAWSPLRPHQ 200
V + ++PHSP + D IWDL++ P+ + I +S + W P+ +
Sbjct: 315 VNGIAWAPHSPHHICTAGDDSQALIWDLQQVPRPVDDPILAYSAGGEVNQIHWGPVHSNW 374
Query: 201 LADC 212
+A C
Sbjct: 375 IAIC 378
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGW 218
+ F+P+ V+A D RIWD + L ++ H+ + + + + P+ L G
Sbjct: 214 MDFNPNLQHVIATCGDDGYVRIWDTRSTSSALTSLHPHAHWVWSVRFHPVHDQLLLTGGS 273
Query: 219 DSLV 230
D+ V
Sbjct: 274 DASV 277
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLK 116
G E +VR + F+P P+V DF +IWD++
Sbjct: 137 GHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDMR 170
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDS 224
FSP + LA YD W++ C+ TI+ HS L ++ L CG D
Sbjct: 46 FSPDG-TCLATSGYDQKIFFWNVYGECENFSTIKGHSGAVMDLKFT-TDSSSLVSCGTDK 103
Query: 225 LVHVFTPRSLREGRCSPTYNT 287
V V+ + G C+ + T
Sbjct: 104 SVRVW---DMETGTCARRFRT 121
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRP----HQLA 206
+ +SP + + +A + IW+ K G +T++ H ++ LAW P+ LA
Sbjct: 153 IAWSPDATKIASACK-NGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLA 211
Query: 207 DCGWDSLVHVF 239
CG D + ++
Sbjct: 212 SCGKDGNIFIW 222
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCG-WD 221
F+P S S++ + S+D + RIWD+K G ++T+ HS+ ++++ R L G +D
Sbjct: 179 FNPQS-SLVVSGSFDESVRIWDVKTGM-CIKTLPAHSDPVSAVSFN--RDGSLIASGSYD 234
Query: 222 SLVHVFTPRSLREGRCSPT 278
LV ++ G+C T
Sbjct: 235 GLVRIW---DTANGQCIKT 250
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDL-KRG-----CDPLETIRHHSEFTYGLAWSPLRPHQ 200
V +SP + +V+A+ S D T ++W + RG +P + H + +AW P+ +
Sbjct: 85 VAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVANNV 144
Query: 201 LADCGWDSLVHVF 239
L G ++++ ++
Sbjct: 145 LLTAGGENVMFMW 157
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDL-KRG-----CDPLETIRHHSEFTYGLAWSPLRPHQ 200
V +SP + +V+A+ S D T ++W + RG +P + H + +AW P+ +
Sbjct: 85 VAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVANNV 144
Query: 201 LADCGWDSLVHVF 239
L G ++++ ++
Sbjct: 145 LLTAGGENVMFMW 157
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDL-KRG-----CDPLETIRHHSEFTYGLAWSPLRPHQ 200
V +SP + +V+A+ S D T ++W + RG +P + H + +AW P+ +
Sbjct: 85 VAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVANNV 144
Query: 201 LADCGWDSLVHVF 239
L G ++++ ++
Sbjct: 145 LLTAGGENVMFMW 157
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDL-KRG-----CDPLETIRHHSEFTYGLAWSPLRPHQ 200
V +SP + +V+A+ S D T ++W + RG +P + H + +AW P+ +
Sbjct: 85 VAWSPFNDNVIASCSEDTTCKVWVIPDRGLNRNLSEPAVELTGHQKRVNTIAWHPVANNV 144
Query: 201 LADCGWDSLVHVF 239
L G ++++ ++
Sbjct: 145 LLTAGGENVMFMW 157
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 30.7 bits (66), Expect = 0.93
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 102 IWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWD 221
I DL+ C P+ +R+H GL+W+P + G D
Sbjct: 385 ILDLRLPCTPVARLRNHEATINGLSWAPHSGSHICTAGDD 424
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Frame = +3
Query: 3 ARGAGCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDL----KRGCDPLETIRHHSEFTYG 170
AR E + + ++PHS S + D+ IWD+ K DP+ R +E
Sbjct: 396 ARLRNHEATINGLSWAPHSGSHICTAGDDYQALIWDVHEMPKPINDPILAYRAQAEVNQ- 454
Query: 171 LAWSPLRPHQLADCGWDSL 227
+ WS P ++ C + L
Sbjct: 455 IHWSSSFPDWISICSDNKL 473
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 81 SYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTPRSLRE 260
S+D+T ++W K + + H + +AWSP+ P A D + V+ E
Sbjct: 508 SHDWTVKLWSTK-DANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNLNEDVE 566
Query: 261 G 263
G
Sbjct: 567 G 567
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Frame = +3
Query: 39 VQFSPHSPSVLAAVSYDFTTRIWDLKRGCD-PLETIRHHSE----FTYGLAWSPLRPHQL 203
V +SP P+V A++ D +W+L + P+ +R +E + L WSP H
Sbjct: 537 VAWSPVHPAVFASIDADGNIFVWNLNEDVEGPVARLRAGAEGESVYMNRLIWSPDGKHVF 596
Query: 204 ADCGWDSLVHVFTPRSLREGRCSPTYNTCSRGLQD 308
+ VH++ R S +N +R L D
Sbjct: 597 VGDD-EGRVHMYDVRESLYVLKSEEWNRFARVLSD 630
>Z82060-7|CAB04884.1| 454|Caenorhabditis elegans Hypothetical
protein T27F6.5a protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 176 RQPVRELRVVPDRLQGVAAALQVPDSRGKVVRDGGQHGGRVRRELH 39
+Q ++R + DR+ G LQ+ + KV D G HGG + E H
Sbjct: 172 QQTYAQIRQIYDRIFG--EILQLDEDVIKVEADSGVHGGHISHEYH 215
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSEFTYGLAWSPLR 191
G AVR VQF + + + YDFT +IW+ G C + T+ H+ Y L + R
Sbjct: 374 GHHAAVRCVQFDG---TTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESER 428
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSEFTYGLAWSPLR 191
G AVR VQF + + + YDFT +IW+ G C + T+ H+ Y L + R
Sbjct: 376 GHHAAVRCVQFDG---TTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESER 430
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 45 FSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHH 152
F P ++L + SYD T R+W L G + TI H+
Sbjct: 46 FDPSPHALLVSASYDLTIRLWQLSTG-KCIGTIPHN 80
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 15 GCECAVRRVQFSPHSPSVLAAVSYDFTTRIWDLKRG-CDPLETIRHHSEFTYGLAWSPLR 191
G AVR VQF + + + YDFT +IW+ G C + T+ H+ Y L + R
Sbjct: 376 GHHAAVRCVQFDG---TTVVSGGYDFTVKIWNAHTGRC--IRTLTGHNNRVYSLLFESER 430
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = +3
Query: 102 IWDLKRGCD---PLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFTPRSLREGRC 269
+W +K G + H + LAWSP LA C D + ++ RS + C
Sbjct: 255 LWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDAC 313
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 60 PSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSL 227
P V+ A S+D T R+WDL G + T+ HH + L P R + A D++
Sbjct: 323 PQVITA-SHDATVRLWDLAAG-RSMCTLTHHKKSVRALTIHP-RLNMFASASPDNI 375
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 60 PSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSL 227
P V+ A S+D T R+WDL G + T+ HH + L P R + A D++
Sbjct: 323 PQVITA-SHDATVRLWDLAAG-RSMCTLTHHKKSVRALTIHP-RLNMFASASPDNI 375
>U53146-1|AAA96111.1| 348|Caenorhabditis elegans Hypothetical
protein ZC411.1 protein.
Length = 348
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 319 VHAFVLLRAGVRDK*NSTKVQLKNCIQHLNTS 414
V +L G+R++ ++ KV+L C++H+ TS
Sbjct: 262 VRGATMLVLGIREEASTVKVELSTCVRHIATS 293
>AC024696-1|AAK84516.1| 348|Caenorhabditis elegans Hypothetical
protein F07B7.7 protein.
Length = 348
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 319 VHAFVLLRAGVRDK*NSTKVQLKNCIQHLNTS 414
V +L G+R++ ++ KV+L C++H+ TS
Sbjct: 262 VRGATMLVLGIREEASTVKVELSTCVRHIATS 293
>AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical
protein Y59C2A.2 protein.
Length = 440
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 275 YIQHVQSRPTG*DVRCMHSYCYALEFGINKIPPKY 379
Y +HV+ RP + ++ YA+ +G+ ++PP +
Sbjct: 260 YFEHVKGRPEPQEYEYLYRVEYAMLYGVLRLPPDF 294
>U97406-3|AAC24292.1| 344|Caenorhabditis elegans Hypothetical
protein F40E3.5 protein.
Length = 344
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -2
Query: 179 PRQPVRELRVVP--DRLQGVAAALQVPDSRGKVVRDGGQHGGRVRRELHPP 33
PR+ V + V D + AA LQV + +GKV+R + G ++ EL P
Sbjct: 286 PREVVTLISAVAYLDNFRNHAAVLQVDNDKGKVIRYKMEEGEQLSLELVKP 336
>AC087232-1|AAK09079.2| 574|Caenorhabditis elegans Hypothetical
protein Y92H12BR.7 protein.
Length = 574
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = -3
Query: 427 FKVFVKCLSVEYSFLVVLW-----WNFIYPELQRV 338
+K+ +KC+S + FLV +W F Y EL+R+
Sbjct: 207 YKIEIKCISTDKDFLVAIWSKEIRAEFSYSELKRL 241
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 102 IWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLADCGWDSLVHVFT 242
IW ++ P ++ H +AW+P P L CG D+ + V++
Sbjct: 549 IWSVQDS-RPRYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWS 594
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 30 VRRVQFSPHSPSVLAAVSYDFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSP-LRPHQLA 206
V V+++P + +VS D T ++WD++ L I H + W+ L A
Sbjct: 370 VEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNEGLIATGSA 429
Query: 207 DC 212
DC
Sbjct: 430 DC 431
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 66 VLAAVSYDFTTRIWDLKRGCDPLETIRHHSE 158
V+ + S D T R+WD++ G + ++T+ HH E
Sbjct: 274 VIISGSSDATVRVWDVETG-ECIKTLIHHCE 303
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 66 VLAAVSYDFTTRIWDLKRGCDPLETIRHHSE 158
V+ + S D T R+WD++ G + ++T+ HH E
Sbjct: 274 VIISGSSDATVRVWDVETG-ECIKTLIHHCE 303
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 RVQFSPHSPSVLAAVSY--DFTTRIWDLKRGCDPLETIRHHSEFTYGLAWSPLRPHQLAD 209
RV + P P LA + + + +WD++R P T H + W
Sbjct: 285 RVAWRPDRPYHLATCASVNETSVHVWDVRRPYLPYVTYDEHRDSVTDACWPSTDFDVFMT 344
Query: 210 CGWDSLV 230
CG D LV
Sbjct: 345 CGKDGLV 351
>Z81124-11|CAB03370.2| 306|Caenorhabditis elegans Hypothetical
protein T21B4.1 protein.
Length = 306
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = -3
Query: 379 VLWWNFIYPELQRVTI---RMHAPDVLSCRPRLHVLYVGEHRPSRSER--GVNTCTSE 221
+L W +Y L+ + I ++ P +S R ++H++ + + +P R R V C S+
Sbjct: 159 MLEWETVYFSLEAIAILSTALYCPIFVSVRQKIHLISLAQSKPDRYIRYQAVVICASK 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,596,779
Number of Sequences: 27780
Number of extensions: 271920
Number of successful extensions: 854
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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