Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060782.seq
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001444-1|AAN71199.1|  313|Drosophila melanogaster GH26062p pro...   132   2e-31
AE014296-2040|ABI31249.1|  313|Drosophila melanogaster CG5946-PC...   132   2e-31
AE014296-2039|ABI31248.1|  316|Drosophila melanogaster CG5946-PD...   132   2e-31
AE014296-2038|AAF50004.1|  313|Drosophila melanogaster CG5946-PA...   132   2e-31
AE014296-2037|AAG22320.1|  316|Drosophila melanogaster CG5946-PB...   132   2e-31
AY060280-1|AAL25319.1|  263|Drosophila melanogaster GH12222p pro...   131   7e-31
AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...    33   0.27 
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...    33   0.27 

>BT001444-1|AAN71199.1|  313|Drosophila melanogaster GH26062p
           protein.
          Length = 313

 Score =  132 bits (320), Expect = 2e-31
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 246 QEIRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNV 425
           +  R GLPS QHVLGLP+GQHIHL A I+++L+IR YTP+SSDED GYVDLV+KVYFK+ 
Sbjct: 69  RRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDS 128

Query: 426 HPKFPEGGKLSQYLNNMKINDTIDVRXTSG 515
           HPKFP GGK++Q+L  +++ D I  R  SG
Sbjct: 129 HPKFPAGGKMTQHLEQLELGDKISFRGPSG 158



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +1

Query: 172 LITLVDSNVKYALPLIEREEISHDTRR 252
           L TLVD N KY LPLIE+E +SHDTRR
Sbjct: 44  LRTLVDPNDKYLLPLIEKENLSHDTRR 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 443 GREAVSVLEQYE--DK*YYRCPXDVRRLQYTGNGTFLIKKLRKD 568
           G +    LEQ E  DK  +R P    RLQY GNGTF IKKLRKD
Sbjct: 135 GGKMTQHLEQLELGDKISFRGPSG--RLQYLGNGTFSIKKLRKD 176


>AE014296-2040|ABI31249.1|  313|Drosophila melanogaster CG5946-PC,
           isoform C protein.
          Length = 313

 Score =  132 bits (320), Expect = 2e-31
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 246 QEIRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNV 425
           +  R GLPS QHVLGLP+GQHIHL A I+++L+IR YTP+SSDED GYVDLV+KVYFK+ 
Sbjct: 69  RRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDS 128

Query: 426 HPKFPEGGKLSQYLNNMKINDTIDVRXTSG 515
           HPKFP GGK++Q+L  +++ D I  R  SG
Sbjct: 129 HPKFPAGGKMTQHLEQLELGDKISFRGPSG 158



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +1

Query: 172 LITLVDSNVKYALPLIEREEISHDTRR 252
           L TLVD N KY LPLIE+E +SHDTRR
Sbjct: 44  LRTLVDPNDKYLLPLIEKENLSHDTRR 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 443 GREAVSVLEQYE--DK*YYRCPXDVRRLQYTGNGTFLIKKLRKD 568
           G +    LEQ E  DK  +R P    RLQY GNGTF IKKLRKD
Sbjct: 135 GGKMTQHLEQLELGDKISFRGPSG--RLQYLGNGTFSIKKLRKD 176


>AE014296-2039|ABI31248.1|  316|Drosophila melanogaster CG5946-PD,
           isoform D protein.
          Length = 316

 Score =  132 bits (320), Expect = 2e-31
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 246 QEIRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNV 425
           +  R GLPS QHVLGLP+GQHIHL A I+++L+IR YTP+SSDED GYVDLV+KVYFK+ 
Sbjct: 72  RRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDS 131

Query: 426 HPKFPEGGKLSQYLNNMKINDTIDVRXTSG 515
           HPKFP GGK++Q+L  +++ D I  R  SG
Sbjct: 132 HPKFPAGGKMTQHLEQLELGDKISFRGPSG 161



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +1

Query: 172 LITLVDSNVKYALPLIEREEISHDTRR 252
           L TLVD N KY LPLIE+E +SHDTRR
Sbjct: 47  LRTLVDPNDKYLLPLIEKENLSHDTRR 73



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 443 GREAVSVLEQYE--DK*YYRCPXDVRRLQYTGNGTFLIKKLRKD 568
           G +    LEQ E  DK  +R P    RLQY GNGTF IKKLRKD
Sbjct: 138 GGKMTQHLEQLELGDKISFRGPSG--RLQYLGNGTFSIKKLRKD 179


>AE014296-2038|AAF50004.1|  313|Drosophila melanogaster CG5946-PA,
           isoform A protein.
          Length = 313

 Score =  132 bits (320), Expect = 2e-31
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 246 QEIRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNV 425
           +  R GLPS QHVLGLP+GQHIHL A I+++L+IR YTP+SSDED GYVDLV+KVYFK+ 
Sbjct: 69  RRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDS 128

Query: 426 HPKFPEGGKLSQYLNNMKINDTIDVRXTSG 515
           HPKFP GGK++Q+L  +++ D I  R  SG
Sbjct: 129 HPKFPAGGKMTQHLEQLELGDKISFRGPSG 158



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +1

Query: 172 LITLVDSNVKYALPLIEREEISHDTRR 252
           L TLVD N KY LPLIE+E +SHDTRR
Sbjct: 44  LRTLVDPNDKYLLPLIEKENLSHDTRR 70



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 443 GREAVSVLEQYE--DK*YYRCPXDVRRLQYTGNGTFLIKKLRKD 568
           G +    LEQ E  DK  +R P    RLQY GNGTF IKKLRKD
Sbjct: 135 GGKMTQHLEQLELGDKISFRGPSG--RLQYLGNGTFSIKKLRKD 176


>AE014296-2037|AAG22320.1|  316|Drosophila melanogaster CG5946-PB,
           isoform B protein.
          Length = 316

 Score =  132 bits (320), Expect = 2e-31
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = +3

Query: 246 QEIRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNV 425
           +  R GLPS QHVLGLP+GQHIHL A I+++L+IR YTP+SSDED GYVDLV+KVYFK+ 
Sbjct: 72  RRFRFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDS 131

Query: 426 HPKFPEGGKLSQYLNNMKINDTIDVRXTSG 515
           HPKFP GGK++Q+L  +++ D I  R  SG
Sbjct: 132 HPKFPAGGKMTQHLEQLELGDKISFRGPSG 161



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +1

Query: 172 LITLVDSNVKYALPLIEREEISHDTRR 252
           L TLVD N KY LPLIE+E +SHDTRR
Sbjct: 47  LRTLVDPNDKYLLPLIEKENLSHDTRR 73



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 443 GREAVSVLEQYE--DK*YYRCPXDVRRLQYTGNGTFLIKKLRKD 568
           G +    LEQ E  DK  +R P    RLQY GNGTF IKKLRKD
Sbjct: 138 GGKMTQHLEQLELGDKISFRGPSG--RLQYLGNGTFSIKKLRKD 179


>AY060280-1|AAL25319.1|  263|Drosophila melanogaster GH12222p
           protein.
          Length = 263

 Score =  131 bits (316), Expect = 7e-31
 Identities = 56/90 (62%), Positives = 72/90 (80%)
 Frame = +3

Query: 246 QEIRLGLPSPQHVLGLPIGQHIHLSAKINDDLVIRAYTPVSSDEDKGYVDLVIKVYFKNV 425
           +  + GLPS QHVLGLP+GQHIHL A I+++L+IR YTP+SSDED GYVDLV+KVYFK+ 
Sbjct: 72  RRFQFGLPSKQHVLGLPVGQHIHLIATIDNELIIRPYTPISSDEDVGYVDLVVKVYFKDS 131

Query: 426 HPKFPEGGKLSQYLNNMKINDTIDVRXTSG 515
           HPKFP GGK++Q+L  +++ D I  R  SG
Sbjct: 132 HPKFPAGGKMTQHLEQLELGDKISFRGPSG 161



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/27 (74%), Positives = 22/27 (81%)
 Frame = +1

Query: 172 LITLVDSNVKYALPLIEREEISHDTRR 252
           L TLVD N KY LPLIE+E +SHDTRR
Sbjct: 47  LRTLVDPNDKYLLPLIEKENLSHDTRR 73



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
 Frame = +2

Query: 443 GREAVSVLEQYE--DK*YYRCPXDVRRLQYTGNGTFLIKKLRKD 568
           G +    LEQ E  DK  +R P    RLQY GNGTF IKKLRKD
Sbjct: 138 GGKMTQHLEQLELGDKISFRGPSG--RLQYLGNGTFSIKKLRKD 179


>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 372 DEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNN 473
           D DK ++ L  ++Y++++H + P G KL Q +N+
Sbjct: 93  DNDKVFLILYKELYYRHIHARIPGGPKLEQRINS 126


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +3

Query: 372 DEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNN 473
           D DK ++ L  ++Y++++H + P G KL Q +N+
Sbjct: 93  DNDKVFLILYKELYYRHIHARIPGGPKLEQRINS 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,993,805
Number of Sequences: 53049
Number of extensions: 477110
Number of successful extensions: 940
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)