Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060782.seq
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   2.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   6.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.6  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   8.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.7  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 550 NEECSVSCVLQSPDVXRTSIVSFIFIL 470
           N  CSVS  +  P     + + F+F+L
Sbjct: 46  NVSCSVSWEVHDPVTNSDTYIGFLFVL 72


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 191 ESTNVINFLLDPLDFFPHRQLAIIVAKTTTDPT 93
           E+ NV+    D LD FP  +  +I A T    T
Sbjct: 262 ETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMT 294


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 191 ESTNVINFLLDPLDFFPHRQLAIIVAKTTTDPT 93
           E+ NV+    D LD FP  +  +I A T    T
Sbjct: 262 ETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMT 294


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 271 LLNMYWDYRSVNIF 312
           LL+++WDY+ +  F
Sbjct: 67  LLSVWWDYKGIVYF 80


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 271 LLNMYWDYRSVNIF 312
           LL+++WDY+ +  F
Sbjct: 189 LLSVWWDYKGIVYF 202


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 128 PIVYGERNLKDLAKS 172
           PIVYG  N++D  K+
Sbjct: 313 PIVYGAFNIRDRNKT 327


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 4/23 (17%), Positives = 17/23 (73%)
 Frame = +2

Query: 404 QGIL*ECTSEVSRGREAVSVLEQ 472
           +G++ +C++ + RG+   +++++
Sbjct: 321 EGVIIDCSNHIGRGKLVTALIQR 343


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +1

Query: 367 RAMRIKAMSIWLSRYTLRMYI 429
           R +R+K   I++  + + MY+
Sbjct: 302 RTLRLKGQMIYMDNWKMMMYL 322


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,739
Number of Sequences: 438
Number of extensions: 3065
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)