Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060780.seq
         (448 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X65923-1|CAA46716.1|  133|Homo sapiens fau protein.                   108   1e-23
X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.                 108   1e-23
CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.                 108   1e-23
BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...   108   1e-23
AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly mu...   108   1e-23
AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens ...   108   1e-23
X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.                  38   0.012
AK027396-1|BAB55082.1|  171|Homo sapiens protein ( Homo sapiens ...    29   9.5  

>X65923-1|CAA46716.1|  133|Homo sapiens fau protein.
          Length = 133

 Score =  108 bits (259), Expect = 1e-23
 Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLDDSCLVSELSSS 189
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAPL+D   + +    
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 190 XTRPDSAIAWW*SARIFGSCR*---VKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 360
                         ++ GS      V+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 361 QTFGRXXGPNSNS 399
            TFG+  GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>X65921-1|CAA46714.1|  133|Homo sapiens fau 1 protein.
          Length = 133

 Score =  108 bits (259), Expect = 1e-23
 Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLDDSCLVSELSSS 189
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAPL+D   + +    
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 190 XTRPDSAIAWW*SARIFGSCR*---VKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 360
                         ++ GS      V+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 361 QTFGRXXGPNSNS 399
            TFG+  GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>CR541974-1|CAG46772.1|  133|Homo sapiens FAU protein.
          Length = 133

 Score =  108 bits (259), Expect = 1e-23
 Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLDDSCLVSELSSS 189
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAPL+D   + +    
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 190 XTRPDSAIAWW*SARIFGSCR*---VKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 360
                         ++ GS      V+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 361 QTFGRXXGPNSNS 399
            TFG+  GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>BC033877-1|AAH33877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           protein.
          Length = 133

 Score =  108 bits (259), Expect = 1e-23
 Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLDDSCLVSELSSS 189
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAPL+D   + +    
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 190 XTRPDSAIAWW*SARIFGSCR*---VKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 360
                         ++ GS      V+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 361 QTFGRXXGPNSNS 399
            TFG+  GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>AY398663-1|AAQ87877.1|  133|Homo sapiens Finkel-Biskis-Reilly
           murine sarcoma virus (FBR-MuSV) ubiquitously expressed
           (fo protein.
          Length = 133

 Score =  108 bits (259), Expect = 1e-23
 Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLDDSCLVSELSSS 189
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAPL+D   + +    
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 190 XTRPDSAIAWW*SARIFGSCR*---VKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 360
                         ++ GS      V+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 361 QTFGRXXGPNSNS 399
            TFG+  GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>AK026639-1|BAB15515.1|  133|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22986 fis, clone KAT11742. ).
          Length = 133

 Score =  108 bits (259), Expect = 1e-23
 Identities = 56/133 (42%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
 Frame = +1

Query: 10  MQLHIRGQSTHVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLDDSCLVSELSSS 189
           MQL +R Q  H  +V GQE++ QIK  + +L  +  ED  + L GAPL+D   + +    
Sbjct: 1   MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60

Query: 190 XTRPDSAIAWW*SARIFGSCR*---VKGQTPKVEXXXXXXXXTGRAKRRIQYNRRFVNVV 360
                         ++ GS      V+GQTPKV         TGRAKRR+QYNRRFVNVV
Sbjct: 61  ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120

Query: 361 QTFGRXXGPNSNS 399
            TFG+  GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133


>X75315-1|CAA53064.1|  230|Homo sapiens SEB4B protein.
          Length = 230

 Score = 38.3 bits (85), Expect = 0.012
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +1

Query: 322 RRIQYNRRFVNVVQTFGRXXG 384
           RR+QYNRRFVNVV TFG+  G
Sbjct: 1   RRMQYNRRFVNVVPTFGKKKG 21


>AK027396-1|BAB55082.1|  171|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14490 fis, clone MAMMA1002886. ).
          Length = 171

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 45  PGRQWPGVHWSDQGTHSY 98
           PG  W G HW  QG  +Y
Sbjct: 55  PGSAWSGDHWDSQGQEAY 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,010,993
Number of Sequences: 237096
Number of extensions: 1031235
Number of successful extensions: 6595
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6583
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)