Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060779.seq
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.7  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 598 FYRYYFYCSHV 630
           FY Y+FY S++
Sbjct: 84  FYSYFFYLSYI 94


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 598 FYRYYFYCSHV 630
           FY Y+FY S++
Sbjct: 40  FYSYFFYLSYI 50


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 453 SIDFIYLILTMF*IFLLNFVCI 518
           S  F+Y +  +F  F++   CI
Sbjct: 65  SFRFVYAVYNIFGAFVMGLFCI 86


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +1

Query: 64  DEEDEKAKIIPWRAQLRKTNSKLNLLE*TSLVN*LILA 177
           D+EDE+ +II    +L ++  ++   +  S+ N L+L+
Sbjct: 385 DKEDERNEIISSALKLSQSELEITACKFFSIDNALLLS 422


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,154
Number of Sequences: 336
Number of extensions: 2622
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)