Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060779.seq
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    25   2.0  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    25   2.7  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   8.3  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   8.3  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    23   8.3  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 7/29 (24%), Positives = 20/29 (68%)
 Frame = +1

Query: 46  MSNGKRDEEDEKAKIIPWRAQLRKTNSKL 132
           M+N  + +E+   ++ PWRA++++  +++
Sbjct: 325 MNNSVKQDEEVLRELEPWRAEVKRLGTQV 353


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 181 AEMSQPAAEVARLRRIETAVSFSLAHSSTSPAALCVAALTLLWLSLHNY 327
           A+ ++  A V R +R+ T    ++AH++    AL  A    LW  L  +
Sbjct: 277 AQRNRTPAPVGRWQRLRTETLNAVAHATV--LALIAAVAACLWAVLDRF 323


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 464 YLFNTNDVLDFPTEFRMYLFKFGYV 538
           +L +  DVL  P E R +L + G+V
Sbjct: 10  HLLHRMDVLPVPAEHREHLHESGFV 34


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 464 YLFNTNDVLDFPTEFRMYLFKFGYV 538
           +L +  DVL  P E R +L + G+V
Sbjct: 10  HLLHRMDVLPVPAEHREHLHESGFV 34


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 464 YLFNTNDVLDFPTEFRMYLFKFGYV 538
           +L +  DVL  P E R +L + G+V
Sbjct: 10  HLLHRMDVLPVPAEHREHLHESGFV 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,670
Number of Sequences: 2352
Number of extensions: 11101
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)