Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060777.seq
         (608 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VQ27 Cluster: CG14352-PA; n=2; Sophophora|Rep: CG1435...    35   1.3  
UniRef50_Q9ALM2 Cluster: Polyketide synthase extender modules 8-...    35   1.7  
UniRef50_A2D9U4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.3  
UniRef50_A2ZYF8 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_Q9VQ27 Cluster: CG14352-PA; n=2; Sophophora|Rep:
           CG14352-PA - Drosophila melanogaster (Fruit fly)
          Length = 251

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 22/75 (29%), Positives = 40/75 (53%)
 Frame = +1

Query: 319 FFISSIRCRAKSLTIEDSLSFK*GNVIAFKNHQESILESAGTWLKRSLQSVQAVEINSAH 498
           F    +R RAK+ TIE+    +   ++A ++   +  +    W K+S ++ + +E + A 
Sbjct: 2   FAAKRVRARAKNFTIEEEEILE-NLILAHRDVIRNKQKDPAIWRKKS-EAWKQIEADFAI 59

Query: 499 LAGIRSSYQLLREKW 543
             GI  S+Q LREK+
Sbjct: 60  QTGIERSWQALREKY 74


>UniRef50_Q9ALM2 Cluster: Polyketide synthase extender modules 8-10;
            n=4; Actinomycetales|Rep: Polyketide synthase extender
            modules 8-10 - Saccharopolyspora spinosa
          Length = 5588

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +3

Query: 429  RVSWNLAETIFAECPGSRDKLCSFGWHPIVISVAQRKMALDLEGTESLRL 578
            R +W   + IFAE  GS D    FG HP ++  A   MAL        RL
Sbjct: 4620 RAAWRHGDDIFAELAGSPD-ASGFGIHPALLDAALHAMALGASPDSEARL 4668


>UniRef50_A2D9U4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1076

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -1

Query: 407 LNAMTFPYLNERESSMVSDFALHLIELMKNHTEKPPTRLTVD--HPRKICE 261
           LN +T  Y N  E  M+ D+A+HLI   KN   K       D  H   +C+
Sbjct: 825 LNILTHTYENNEELKMMRDYAIHLISSYKNSLPKIENNFEFDKLHLTVLCQ 875


>UniRef50_A2ZYF8 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 1211

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = +1

Query: 403 FKNHQESILESAGTWLKRSLQSVQAV--EINSAHLAGIRSSYQLLREKWL*TWR-ELNH* 573
           FK+H  S  E++  WL+  L+  + +   +  + LA      QL R+K + TWR  L + 
Sbjct: 329 FKSHAFSGAETSDPWLREKLEIAKKISRRLGQSPLAAKAVGSQLSRKKDIATWRAALKNG 388

Query: 574 DLKITNKA 597
           +L  T KA
Sbjct: 389 NLSETRKA 396


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,160,590
Number of Sequences: 1657284
Number of extensions: 11207586
Number of successful extensions: 25695
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25691
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)