BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060777.seq
(608 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY555274-1|AAS66753.1| 2223|Homo sapiens PF6 protein. 30 5.5
AL513191-1|CAH71478.1| 2223|Homo sapiens sperm associated antige... 30 5.5
AL139345-2|CAI22957.1| 2223|Homo sapiens sperm associated antige... 30 5.5
AL139345-1|CAI22956.1| 660|Homo sapiens sperm associated antige... 30 5.5
AL121993-5|CAI22740.1| 2223|Homo sapiens sperm associated antige... 30 5.5
AL121993-1|CAI22736.1| 660|Homo sapiens sperm associated antige... 30 5.5
BC030651-1|AAH30651.1| 621|Homo sapiens AGBL3 protein protein. 29 9.7
>AY555274-1|AAS66753.1| 2223|Homo sapiens PF6 protein.
Length = 2223
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 398 MTFPYLNERESSMVSDFALHLIELMKNHTEKPP 300
M+FP + E S V++ A HL +L K PP
Sbjct: 1825 MSFPKMEETTKSHVTEVAAHLTDLFKQSLATPP 1857
>AL513191-1|CAH71478.1| 2223|Homo sapiens sperm associated antigen 17
protein.
Length = 2223
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 398 MTFPYLNERESSMVSDFALHLIELMKNHTEKPP 300
M+FP + E S V++ A HL +L K PP
Sbjct: 1825 MSFPKMEETTKSHVTEVAAHLTDLFKQSLATPP 1857
>AL139345-2|CAI22957.1| 2223|Homo sapiens sperm associated antigen 17
protein.
Length = 2223
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 398 MTFPYLNERESSMVSDFALHLIELMKNHTEKPP 300
M+FP + E S V++ A HL +L K PP
Sbjct: 1825 MSFPKMEETTKSHVTEVAAHLTDLFKQSLATPP 1857
>AL139345-1|CAI22956.1| 660|Homo sapiens sperm associated antigen
17 protein.
Length = 660
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 398 MTFPYLNERESSMVSDFALHLIELMKNHTEKPP 300
M+FP + E S V++ A HL +L K PP
Sbjct: 305 MSFPKMEETTKSHVTEVAAHLTDLFKQSLATPP 337
>AL121993-5|CAI22740.1| 2223|Homo sapiens sperm associated antigen 17
protein.
Length = 2223
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 398 MTFPYLNERESSMVSDFALHLIELMKNHTEKPP 300
M+FP + E S V++ A HL +L K PP
Sbjct: 1825 MSFPKMEETTKSHVTEVAAHLTDLFKQSLATPP 1857
>AL121993-1|CAI22736.1| 660|Homo sapiens sperm associated antigen
17 protein.
Length = 660
Score = 30.3 bits (65), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -1
Query: 398 MTFPYLNERESSMVSDFALHLIELMKNHTEKPP 300
M+FP + E S V++ A HL +L K PP
Sbjct: 305 MSFPKMEETTKSHVTEVAAHLTDLFKQSLATPP 337
>BC030651-1|AAH30651.1| 621|Homo sapiens AGBL3 protein protein.
Length = 621
Score = 29.5 bits (63), Expect = 9.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -3
Query: 249 TDHSITRYVHRALFHCLFTLNFKGSDHFVLCIIKFGSVQKSKEATGTQIV 100
+D S T Y+ + +F + + N F C KF +VQKSKE TG ++
Sbjct: 476 SDRSKTLYLQQRIFPLMLSKNCPDKFSFSAC--KF-NVQKSKEGTGRVVM 522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,218,567
Number of Sequences: 237096
Number of extensions: 1698542
Number of successful extensions: 6668
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6668
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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