Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060777.seq
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071414-1|AAL49036.1|  251|Drosophila melanogaster RE49731p pro...    35   0.075
AE014134-272|AAF51355.1|  251|Drosophila melanogaster CG14352-PA...    35   0.075

>AY071414-1|AAL49036.1|  251|Drosophila melanogaster RE49731p
           protein.
          Length = 251

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 22/75 (29%), Positives = 40/75 (53%)
 Frame = +1

Query: 319 FFISSIRCRAKSLTIEDSLSFK*GNVIAFKNHQESILESAGTWLKRSLQSVQAVEINSAH 498
           F    +R RAK+ TIE+    +   ++A ++   +  +    W K+S ++ + +E + A 
Sbjct: 2   FAAKRVRARAKNFTIEEEEILE-NLILAHRDVIRNKQKDPAIWRKKS-EAWKQIEADFAI 59

Query: 499 LAGIRSSYQLLREKW 543
             GI  S+Q LREK+
Sbjct: 60  QTGIERSWQALREKY 74


>AE014134-272|AAF51355.1|  251|Drosophila melanogaster CG14352-PA
           protein.
          Length = 251

 Score = 35.1 bits (77), Expect = 0.075
 Identities = 22/75 (29%), Positives = 40/75 (53%)
 Frame = +1

Query: 319 FFISSIRCRAKSLTIEDSLSFK*GNVIAFKNHQESILESAGTWLKRSLQSVQAVEINSAH 498
           F    +R RAK+ TIE+    +   ++A ++   +  +    W K+S ++ + +E + A 
Sbjct: 2   FAAKRVRARAKNFTIEEEEILE-NLILAHRDVIRNKQKDPAIWRKKS-EAWKQIEADFAI 59

Query: 499 LAGIRSSYQLLREKW 543
             GI  S+Q LREK+
Sbjct: 60  QTGIERSWQALREKY 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,648,851
Number of Sequences: 53049
Number of extensions: 504678
Number of successful extensions: 1024
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)