BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060774.seq (630 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 136 5e-31 UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 128 1e-28 UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 115 8e-25 UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 112 6e-24 UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 112 6e-24 UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 110 2e-23 UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 109 4e-23 UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 106 4e-22 UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 102 6e-21 UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 102 6e-21 UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 101 2e-20 UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 100 3e-20 UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 97 2e-19 UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 93 5e-18 UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 88 1e-16 UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 80 4e-14 UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 75 1e-12 UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 59 1e-07 UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 50 3e-05 UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 50 6e-05 UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 46 7e-04 UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 44 0.002 UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.016 UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 40 0.049 UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 40 0.065 UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 37 0.35 UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 37 0.46 UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.61 UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.80 UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 1.9 UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 34 2.4 UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 3.2 UniRef50_A7HGN9 Cluster: Undecaprenyl diphosphate synthase; n=4;... 34 3.2 UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 3.2 UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 4.3 UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.3 UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 5.7 UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5 UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 33 7.5 >UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila melanogaster (Fruit fly) Length = 401 Score = 136 bits (328), Expect = 5e-31 Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 1/113 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590 VQ++GH+I+ L S +V ++ KTKQAVIF RR Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176 Score = 70.1 bits (164), Expect = 4e-11 Identities = 34/57 (59%), Positives = 42/57 (73%) Frame = +2 Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238 MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57 >UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens (Human) Length = 427 Score = 128 bits (308), Expect = 1e-28 Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578 A V ++GH IE L +V KTK+AV+ Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169 Score = 72.1 bits (169), Expect = 1e-11 Identities = 34/55 (61%), Positives = 42/55 (76%) Frame = +2 Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238 ++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54 >UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia malayi (Filarial nematode worm) Length = 306 Score = 115 bits (277), Expect = 8e-25 Identities = 50/52 (96%), Positives = 51/52 (98%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH Sbjct: 178 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWH 229 Score = 51.2 bits (117), Expect = 2e-05 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = +2 Query: 101 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238 VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY V Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAV 171 >UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=5; Plasmodium|Rep: 60S ribosomal subunit protein L4/L1, putative - Plasmodium chabaudi Length = 411 Score = 112 bits (270), Expect = 6e-24 Identities = 58/114 (50%), Positives = 64/114 (56%), Gaps = 1/114 (0%) Frame = +3 Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXX 422 G +TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK WRRW Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIWRRWGRKIN 116 Query: 423 XXXXXXXXXXXXXXPASQRFVQARGHIIERFR-ASLGCSRQVPEINKTKQAVIF 581 V ARGH I + L S + + KTK A+ F Sbjct: 117 LKEKRYAVCSSIAASGITSLVLARGHRISNLKEVPLVASNDIESMQKTKDALKF 170 Score = 48.8 bits (111), Expect = 1e-04 Identities = 23/56 (41%), Positives = 34/56 (60%) Frame = +2 Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVR 241 ++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V+ Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVK 55 >UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; Phaeosphaeria nodorum|Rep: Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum) Length = 349 Score = 112 bits (270), Expect = 6e-24 Identities = 51/82 (62%), Positives = 54/82 (65%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH Sbjct: 37 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLNQK 96 Query: 435 XXXXXXXXXXPASQRFVQARGH 500 S + ARGH Sbjct: 97 RFATASALAASGSPALLMARGH 118 >UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia bovis|Rep: Ribosomal protein RPL4A - Babesia bovis Length = 360 Score = 110 bits (265), Expect = 2e-23 Identities = 53/108 (49%), Positives = 64/108 (59%), Gaps = 1/108 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 QTSA SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ WRRWH Sbjct: 60 QTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVNLKEK 119 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERFR-ASLGCSRQVPEINKTKQAV 575 A V +RGH IE R + + +INKTK AV Sbjct: 120 RQALASALAATAVVPVVMSRGHRIEALREVPMVVDDAIEQINKTKDAV 167 Score = 46.8 bits (106), Expect = 4e-04 Identities = 26/53 (49%), Positives = 32/53 (60%) Frame = +2 Query: 86 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRR 244 RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y V + Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSK 55 >UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Sclerotiniaceae|Rep: 60S ribosomal protein L4 - Sclerotinia sclerotiorum 1980 Length = 373 Score = 109 bits (263), Expect = 4e-23 Identities = 46/52 (88%), Positives = 48/52 (92%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410 QTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH Sbjct: 60 QTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWH 111 Score = 59.7 bits (138), Expect = 6e-08 Identities = 29/55 (52%), Positives = 34/55 (61%) Frame = +2 Query: 83 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRRR 247 +RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY V + Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEK 56 >UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4; Cryptosporidium|Rep: 60S ribosomal protein-like, putative - Cryptosporidium parvum Iowa II Length = 394 Score = 106 bits (255), Expect = 4e-22 Identities = 58/118 (49%), Positives = 64/118 (54%), Gaps = 1/118 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 Q SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +RR+H Sbjct: 62 QHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTEK 121 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RRSRHGL 605 V ARGH I L S ++ INKT AV F + GL Sbjct: 122 RHAVAAAIAATGCPSLVMARGHRINNVPELPLVISNEIQNINKTSTAVEFFKNFGKGL 179 Score = 53.2 bits (122), Expect = 5e-06 Identities = 26/55 (47%), Positives = 35/55 (63%) Frame = +2 Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238 ++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y V Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGV 55 >UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, putative; n=2; Theileria|Rep: 60S ribosomal subunit protein L4/L1, putative - Theileria annulata Length = 426 Score = 102 bits (245), Expect = 6e-21 Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 QTSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ WR WH Sbjct: 60 QTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKINLKEK 119 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAV 575 AS V +RGH +E L + + KT+ AV Sbjct: 120 RLALAVSVAATASVPLVMSRGHRVESVPELPLVLDDTMETLTKTRDAV 167 Score = 54.0 bits (124), Expect = 3e-06 Identities = 27/55 (49%), Positives = 36/55 (65%) Frame = +2 Query: 80 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRR 244 V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y + R Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISR 55 >UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; Leishmania major strain Friedlin|Rep: Ribosomal protein L1a, putative - Leishmania major strain Friedlin Length = 432 Score = 102 bits (245), Expect = 6e-21 Identities = 53/108 (49%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +3 Query: 261 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 440 SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK +RRWH Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRF 121 Query: 441 XXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF 581 + V +RGH I L + KTK+A+ F Sbjct: 122 AVVSALAASSVPSLVMSRGHQIGNVPEVPLVVEDSIQGYEKTKEAMAF 169 Score = 65.3 bits (152), Expect = 1e-09 Identities = 33/54 (61%), Positives = 38/54 (70%) Frame = +2 Query: 83 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRR 244 ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V R Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNR 55 >UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 - Streblomastix strix Length = 492 Score = 101 bits (241), Expect = 2e-20 Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 Q SAESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K WRRWH Sbjct: 61 QHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVNVTQR 120 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAV 575 ++ V ARGH I+ L S V +I KTK+AV Sbjct: 121 RFAMCSAIAASSNPSLVLARGHKIDNVPELPLVVSDDVEQIKKTKEAV 168 Score = 38.7 bits (86), Expect = 0.11 Identities = 18/47 (38%), Positives = 30/47 (63%) Frame = +2 Query: 92 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 232 L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPF 52 >UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Oligohymenophorea|Rep: Ribosomal protein L4, putative - Paramecium tetraurelia Length = 406 Score = 100 bits (239), Expect = 3e-20 Identities = 54/113 (47%), Positives = 60/113 (53%), Gaps = 1/113 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 Q SAESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K WRRWH Sbjct: 62 QHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVNIKQK 121 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590 V ARGH I + + L ++ KT A+ F +R Sbjct: 122 RHAAATAVAATGIVPLVLARGHRISQVPQIPLVVEDKIESYEKTTDALNFLKR 174 Score = 52.0 bits (119), Expect = 1e-05 Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%) Frame = +2 Query: 89 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238 PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAV 55 >UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 - Encephalitozoon cuniculi Length = 335 Score = 97.5 bits (232), Expect = 2e-19 Identities = 51/108 (47%), Positives = 60/108 (55%), Gaps = 1/108 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 Q SAESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK RRW Sbjct: 58 QHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTKTHRRWARKVVENTK 117 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERFR-ASLGCSRQVPEINKTKQAV 575 A V+ARGH I + + S + + KTK AV Sbjct: 118 KIAEAMAVAASAQASLVEARGHRISDVKMLPIIVSDDIAKARKTKDAV 165 >UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomonadaceae|Rep: 60s ribosomal protein L1 - Guillardia theta (Cryptomonas phi) Length = 255 Score = 93.1 bits (221), Expect = 5e-18 Identities = 38/51 (74%), Positives = 42/51 (82%) Frame = +3 Query: 258 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 410 TSA SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+F PT WR+WH Sbjct: 57 TSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNPTTIWRKWH 107 >UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal protein L4 - Entamoeba histolytica HM-1:IMSS Length = 431 Score = 88.2 bits (209), Expect = 1e-16 Identities = 50/109 (45%), Positives = 59/109 (54%), Gaps = 2/109 (1%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 Q SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K +R+W Sbjct: 61 QHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPKQMR 120 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERFR--ASLGCSRQVPEINKTKQAV 575 A V ARGH I + S+ + I KTKQAV Sbjct: 121 RFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAV 169 Score = 47.6 bits (108), Expect = 2e-04 Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 8/190 (4%) Frame = +2 Query: 83 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRRRLVTNQ 262 +RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP V + Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62 Query: 263 C*IMGYWTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEALAALAPSR--QPPTAE 436 I W R + P S SG ++ R + L R Q T + Sbjct: 63 SAIS--WGTGRAVARIP--RISGSGSG-RNGQGAFGNMTRKGHMFSPLKNFRKWQRKTPK 117 Query: 437 S----GLGGSVAATGVPTLRSG*RTHY*KIPSFPWL*PTSSRD--QQDQTGCHLLKALKA 598 + +AA+ VP L S H +P P + + S ++ + +LLK + A Sbjct: 118 QMRRFAVASCIAASAVPALVSARGHHIAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINA 177 Query: 599 WSDILKVYKS 628 +SD+LKV S Sbjct: 178 YSDVLKVIAS 187 >UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein, putative - Trichomonas vaginalis G3 Length = 370 Score = 80.2 bits (189), Expect = 4e-14 Identities = 44/108 (40%), Positives = 55/108 (50%), Gaps = 1/108 (0%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 + SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P RRW Sbjct: 58 KVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNPPTLLRRWFRPVPSRQR 117 Query: 435 XXXXXXXXXXPASQRFVQARGHII-ERFRASLGCSRQVPEINKTKQAV 575 A VQARGH++ E + V EI +T+ AV Sbjct: 118 KFAIASAIAATAVVPLVQARGHVLGEVKEVPIVVVDAVQEIKRTRDAV 165 Score = 38.7 bits (86), Expect = 0.11 Identities = 17/51 (33%), Positives = 36/51 (70%) Frame = +2 Query: 80 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 232 ++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPH 49 >UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella natans|Rep: Ribosomal protein L4A - Bigelowiella natans (Pedinomonas minutissima) (Chlorarachnion sp.(strain CCMP 621)) Length = 278 Score = 75.4 bits (177), Expect = 1e-12 Identities = 33/86 (38%), Positives = 48/86 (55%) Frame = +3 Query: 252 SQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXX 431 +Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F ++W+ Sbjct: 61 NQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLFGNRNYSKKWNIKTNRKV 120 Query: 432 XXXXXXXXXXXPASQRFVQARGHIIE 509 + V +RGH ++ Sbjct: 121 KVSAFKTALLSTLFETLVVSRGHSLK 146 >UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia ATCC 50803 Length = 316 Score = 58.8 bits (136), Expect = 1e-07 Identities = 39/107 (36%), Positives = 47/107 (43%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 Q +A SWG GRAVAR+PR G G GA+ N RGG M PT RRW Sbjct: 57 QCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPTTVIRRWCRKVNLNQR 110 Query: 435 XXXXXXXXXXPASQRFVQARGHIIERFRASLGCSRQVPEINKTKQAV 575 A+ V+ARGH I S+ + KTK A+ Sbjct: 111 RYAVASALAASANAALVEARGHRIADV-PSIPLVVDTDNVTKTKDAL 156 Score = 43.6 bits (98), Expect = 0.004 Identities = 22/52 (42%), Positives = 27/52 (51%) Frame = +2 Query: 89 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVRR 244 P V V+ V A P P VF P+RPD++N VH + K R PY V R Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSR 52 >UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum aerophilum Length = 283 Score = 50.4 bits (115), Expect = 3e-05 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 1/112 (0%) Frame = +3 Query: 240 EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXX 419 EG + S ES+G G +ARIPR +G R G F RGGR P K ++ H Sbjct: 76 EGAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEI 132 Query: 420 XXXXXXXXXXXXXXXPASQRFVQARGHIIERFRA-SLGCSRQVPEINKTKQA 572 A + +V ARGH++E+ + + +IN+ K+A Sbjct: 133 NKKEKKLAIRSAIAATAYRSWVAARGHVVEKVPSLPVVVVGDAEKINRAKEA 184 >UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanopyrus kandleri Length = 260 Score = 49.6 bits (113), Expect = 6e-05 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPTKPWRRWHXXXXXXX 431 +TSAESWG G VA +PRV+G +G+ A GG + APT P + W Sbjct: 55 RTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPT-PEKDWTQRVNRKE 113 Query: 432 XXXXXXXXXXXPASQRFVQARGHIIE 509 A FV+ RGH+I+ Sbjct: 114 RRAALRSALAATAKPEFVKERGHVID 139 Score = 32.3 bits (70), Expect = 9.9 Identities = 16/48 (33%), Positives = 27/48 (56%) Frame = +2 Query: 89 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPY 232 P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPY 46 >UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum symbiosum Length = 271 Score = 46.0 bits (104), Expect = 7e-04 Identities = 28/97 (28%), Positives = 39/97 (40%) Frame = +3 Query: 279 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXXXXXXXX 458 TG ARI R++GGG R G+ RGGR P K + H Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPKVQKVIHKKINKKEKKLALCSAI 124 Query: 459 XXPASQRFVQARGHIIERFRASLGCSRQVPEINKTKQ 569 AS+ V RGHII+ + S + ++K + Sbjct: 125 AATASKSTVAGRGHIIDGIELPIVISDDIESVSKASE 161 >UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L4 - Canis familiaris Length = 248 Score = 44.4 bits (100), Expect = 0.002 Identities = 20/28 (71%), Positives = 21/28 (75%) Frame = +3 Query: 240 EGGWSQTSAESWGTGRAVARIPRVRGGG 323 E QTSAESWGTGRA +PRVRGGG Sbjct: 46 ESAGYQTSAESWGTGRARGPMPRVRGGG 73 >UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; Leishmania|Rep: Putative uncharacterized protein - Leishmania major strain Friedlin Length = 534 Score = 41.5 bits (93), Expect = 0.016 Identities = 18/35 (51%), Positives = 20/35 (57%) Frame = +2 Query: 320 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 424 W VR C+R HV WW +VR E L LAP QP Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168 >UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum pernix Length = 272 Score = 39.9 bits (89), Expect = 0.049 Identities = 22/46 (47%), Positives = 28/46 (60%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 392 +TSA S G GR VAR+PR++G S + A NM RGGR P + Sbjct: 68 RTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108 >UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarchaeota|Rep: 50S ribosomal protein L4P - Methanosphaera stadtmanae (strain DSM 3091) Length = 259 Score = 39.5 bits (88), Expect = 0.065 Identities = 25/82 (30%), Positives = 37/82 (45%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 +T+AES+G+GR A +PRV+G S + AF GGR P + +H Sbjct: 56 RTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKER 110 Query: 435 XXXXXXXXXXPASQRFVQARGH 500 A++ V+ RGH Sbjct: 111 TLAIRSAIAATANKELVEQRGH 132 >UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarchaeota|Rep: 50S ribosomal protein L4P - Archaeoglobus fulgidus Length = 252 Score = 37.1 bits (82), Expect = 0.35 Identities = 26/102 (25%), Positives = 40/102 (39%) Frame = +3 Query: 261 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 440 S E+WG G AR+PR + G + GGR P KP R+W Sbjct: 57 SWENWGPGHGYARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRK 111 Query: 441 XXXXXXXXPASQRFVQARGHIIERFRASLGCSRQVPEINKTK 566 A++ V+ R H+ E + S ++ + +TK Sbjct: 112 ALKSAIAATANEELVRQRSHVFEGELPKV-VSNELESVKRTK 152 >UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus solfataricus Length = 267 Score = 36.7 bits (81), Expect = 0.46 Identities = 25/85 (29%), Positives = 37/85 (43%) Frame = +3 Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434 +TSAES+G +AR+PRV+ SG+ A GGR+ P ++ Sbjct: 62 RTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEK 116 Query: 435 XXXXXXXXXXPASQRFVQARGHIIE 509 A FV+ARGH+ + Sbjct: 117 RLAVISALSATADIAFVRARGHVFK 141 >UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F01.18; n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein P0431F01.18 - Oryza sativa subsp. japonica (Rice) Length = 320 Score = 36.3 bits (80), Expect = 0.61 Identities = 23/55 (41%), Positives = 25/55 (45%) Frame = +3 Query: 207 CPRTRGSPTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371 CP R P G AE + T AR PR GGG HR GA G + RGG Sbjct: 177 CPCRRPHPP----GAPHAEAEPF-TAPLRARRPRAAGGGKHRGAHGANGGVARGG 226 >UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1; Ostreococcus tauri|Rep: Ribosomal protein RPL1/RPL2/RL4L4 - Ostreococcus tauri Length = 404 Score = 35.9 bits (79), Expect = 0.80 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +2 Query: 131 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 217 GA+ +P VF +PIR D+VN VH ++KN Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43 >UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP00000014064; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064 - Strongylocentrotus purpuratus Length = 300 Score = 34.7 bits (76), Expect = 1.9 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = -1 Query: 366 HDTCYRRHPDRTYEYHHHGHAEFGRQH 286 H+ YR H + +HHHGH+ G H Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132 >UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone THYMU3038687 - Homo sapiens (Human) Length = 189 Score = 34.3 bits (75), Expect = 2.4 Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Frame = +2 Query: 281 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 445 WT CR +AC W W++ V +GC W + H R+P E L Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138 Query: 446 GGSVAATGVPTLRS 487 G+ + P RS Sbjct: 139 HGAPSCLSTPAPRS 152 >UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; n=1; Gibberella zeae PH-1|Rep: hypothetical protein FG01599.1 - Gibberella zeae PH-1 Length = 1347 Score = 33.9 bits (74), Expect = 3.2 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%) Frame = -1 Query: 375 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262 Y H+D Y +H D + HHHG +G H + +H Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516 >UniRef50_A7HGN9 Cluster: Undecaprenyl diphosphate synthase; n=4; Myxococcales|Rep: Undecaprenyl diphosphate synthase - Anaeromyxobacter sp. Fw109-5 Length = 255 Score = 33.9 bits (74), Expect = 3.2 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = -3 Query: 298 RATARPVPHDSALVCDQPP--SHAVGLPRVLGHR 203 R ARPVP A++ D + A GLPRVLGHR Sbjct: 18 RVKARPVPRHVAIIMDGNGRWAEARGLPRVLGHR 51 >UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; Oryza sativa (japonica cultivar-group)|Rep: Putative uncharacterized protein - Oryza sativa subsp. japonica (Rice) Length = 150 Score = 33.9 bits (74), Expect = 3.2 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = +3 Query: 264 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 374 A+SW TGRA A + R R GG R A N G R Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72 >UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein; n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical protein - Nasonia vitripennis Length = 1628 Score = 33.5 bits (73), Expect = 4.3 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = -1 Query: 351 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 256 R PD + +HHHGH G HV+ YP F Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213 >UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella vectensis|Rep: Predicted protein - Nematostella vectensis Length = 263 Score = 33.5 bits (73), Expect = 4.3 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -1 Query: 378 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 262 TY+ H Y +HP T+ YHH H + ++ Q+P + H Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTH 149 >UniRef50_A6QTK7 Cluster: Predicted protein; n=1; Ajellomyces capsulatus NAm1|Rep: Predicted protein - Ajellomyces capsulatus NAm1 Length = 273 Score = 33.1 bits (72), Expect = 5.7 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = +3 Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSG 338 G WS+ AE G G AV R RV GGG G Sbjct: 165 GSWSRPGAERRGAGMAVEREERVLGGGREVDG 196 >UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; Burkholderia phytofirmans PsJN|Rep: Putative uncharacterized protein - Burkholderia phytofirmans PsJN Length = 753 Score = 32.7 bits (71), Expect = 7.5 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -1 Query: 381 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 289 R + HHD C R R ++HHHGH GR+ Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506 >UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygota|Rep: Ribosomal protein 23 - Lonomia obliqua (Moth) Length = 274 Score = 32.7 bits (71), Expect = 7.5 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = +3 Query: 492 RGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590 RG++++ L S ++ EINKTKQAVIF RR Sbjct: 5 RGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRR 38 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 605,488,092 Number of Sequences: 1657284 Number of extensions: 12049936 Number of successful extensions: 40761 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 37466 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 40302 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 46466611856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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