Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060774.seq
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein ...    29   0.092
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   2.0  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.1  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   8.0  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   8.0  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   8.0  

>AJ302654-1|CAC35519.1|  168|Anopheles gambiae gSG2-like protein
           protein.
          Length = 168

 Score = 29.5 bits (63), Expect = 0.092
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +3

Query: 219 RGSPTA*EGGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
           RG P   +GG  Q    S+G+G+    +P + G G  +SG  +FGN  +GG
Sbjct: 114 RGVPFFGQGG-GQGGIPSFGSGQQNGGVPFL-GNGQGQSGFPSFGNGQQGG 162


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +2

Query: 404 LAPSRQPPTAESGLGGSVAATGVPTLRS 487
           L  S    T+++ +G  + A+G+PTLR+
Sbjct: 7   LTRSMSADTSKTSVGKQLPASGIPTLRA 34


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 389 EALAA-LAPSRQPPTAESGLGGSVAATGVPTLRSG*RTHY*KIPSFPWL*PTSSRDQQDQ 565
           EA+++ L P+ +P  +ES     V  T    +++   T   +IPS   + PT+S D+Q  
Sbjct: 758 EAVSSKLPPTAEPEHSESSDVECVERTERLKVKTTINTS--RIPSMCIITPTNSDDEQPP 815

Query: 566 TGCHLLKA 589
            G    KA
Sbjct: 816 AGSATAKA 823


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 351 RRHPDRTYEYHHHGH 307
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 568 CLVLLISGTCRL 533
           CLVLLI+G C L
Sbjct: 9   CLVLLIAGCCAL 20


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -1

Query: 354 YRRHPDRTYEYHHH--GHAEFGRQHVQYPMIQ 265
           +  HP   + +HHH    A+    H Q+ +IQ
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAGYHHQHNVIQ 529


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 121 DGAGCSQAPPVRVQGAHPSGPG 186
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,273
Number of Sequences: 2352
Number of extensions: 12270
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)