Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060774.seq
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 128 1e-29
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 128 2e-29
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 128 2e-29
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 128 2e-29
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 127 4e-29
AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens ... 34 0.36
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p... 30 5.9
D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhance... 30 5.9
AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein. 30 5.9
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 128 bits (310), Expect = 1e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE F L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEFPELPLVVEDKVEGYKKTKEAVL 169
Score = 74.1 bits (174), Expect = 4e-13
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 75 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 134
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 135 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 183
Score = 72.5 bits (170), Expect = 1e-12
Identities = 34/56 (60%), Positives = 43/56 (76%)
Frame = +2
Query: 71 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 68
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 184 LLKKLKAWNDIKKVYAS 200
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 128 bits (308), Expect = 2e-29
Identities = 64/109 (58%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V ++GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 127 bits (306), Expect = 4e-29
Identities = 64/109 (58%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WRRWH
Sbjct: 61 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQK 120
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVI 578
A V +GH IE L +V KTK+AV+
Sbjct: 121 RYAICSALAASALPALVMPKGHRIEEVPELPLVVEDKVEGYKKTKEAVL 169
Score = 72.1 bits (169), Expect = 1e-12
Identities = 34/55 (61%), Positives = 42/55 (76%)
Frame = +2
Query: 74 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY V
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAV 54
Score = 29.9 bits (64), Expect = 7.8
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 578 LLKALKAWSDILKVYKS 628
LLK LKAW+DI KVY S
Sbjct: 170 LLKKLKAWNDIKKVYAS 186
>AK128408-1|BAC87425.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ46551 fis, clone THYMU3038687. ).
Length = 189
Score = 34.3 bits (75), Expect = 0.36
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Frame = +2
Query: 281 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 445
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 446 GGSVAATGVPTLRS 487
G+ + P RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
protein protein.
Length = 3703
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 391 SPGGVGTVASTSDSGERPWRQRCCYRRPNASFRLEDTLLKDSELPLVV 534
SPG G+ + DSG+RP ++R + N ++ + D P ++
Sbjct: 2927 SPGASGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2974
>D10250-1|BAA01095.1| 2783|Homo sapiens alpha-fetoprotein enhancer
binding protein protein.
Length = 2783
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 391 SPGGVGTVASTSDSGERPWRQRCCYRRPNASFRLEDTLLKDSELPLVV 534
SPG G+ + DSG+RP ++R + N ++ + D P ++
Sbjct: 2013 SPGASGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 2060
>AC004943-1|AAC79153.1| 2553|Homo sapiens unknown protein.
Length = 2553
Score = 30.3 bits (65), Expect = 5.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 391 SPGGVGTVASTSDSGERPWRQRCCYRRPNASFRLEDTLLKDSELPLVV 534
SPG G+ + DSG+RP ++R + N ++ + D P ++
Sbjct: 1777 SPGASGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTML 1824
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,378,517
Number of Sequences: 237096
Number of extensions: 1833276
Number of successful extensions: 5689
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5568
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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