Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060774.seq
(630 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 136 3e-32
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 136 3e-32
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 136 3e-32
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 136 3e-32
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 136 3e-32
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 31 1.3
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 31 1.3
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 31 1.3
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 31 1.3
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 1.7
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 1.7
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 1.7
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 29 3.9
AY119139-1|AAM50999.1| 615|Drosophila melanogaster RE41430p pro... 29 3.9
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 29 3.9
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,... 29 6.9
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 136 bits (328), Expect = 3e-32
Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590
VQ++GH+I+ L S +V ++ KTKQAVIF RR
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.9 bits (69), Expect = 0.74
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 443 LGGSVAATGVPTLRSG*RTHY*KIPSFPWL*PTS-SRDQQDQTGCHLLKALKAWSDILKV 619
L ++AA+GVP L + FP + + Q+ + L+ LK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 620 YKS 628
YKS
Sbjct: 187 YKS 189
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 136 bits (328), Expect = 3e-32
Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 2 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQR 61
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590
VQ++GH+I+ L S +V ++ KTKQAVIF RR
Sbjct: 62 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 114
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 136 bits (328), Expect = 3e-32
Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590
VQ++GH+I+ L S +V ++ KTKQAVIF RR
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.9 bits (69), Expect = 0.74
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 443 LGGSVAATGVPTLRSG*RTHY*KIPSFPWL*PTS-SRDQQDQTGCHLLKALKAWSDILKV 619
L ++AA+GVP L + FP + + Q+ + L+ LK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 620 YKS 628
YKS
Sbjct: 187 YKS 189
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 136 bits (328), Expect = 3e-32
Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590
VQ++GH+I+ L S +V ++ KTKQAVIF RR
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.9 bits (69), Expect = 0.74
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 443 LGGSVAATGVPTLRSG*RTHY*KIPSFPWL*PTS-SRDQQDQTGCHLLKALKAWSDILKV 619
L ++AA+GVP L + FP + + Q+ + L+ LK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 620 YKS 628
YKS
Sbjct: 187 YKS 189
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 136 bits (328), Expect = 3e-32
Identities = 68/113 (60%), Positives = 76/113 (67%), Gaps = 1/113 (0%)
Frame = +3
Query: 255 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXX 434
QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 435 XXXXXXXXXXPASQRFVQARGHIIERF-RASLGCSRQVPEINKTKQAVIF*RR 590
VQ++GH+I+ L S +V ++ KTKQAVIF RR
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRR 176
Score = 70.1 bits (164), Expect = 2e-12
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = +2
Query: 68 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 238
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y V
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAV 57
Score = 31.9 bits (69), Expect = 0.74
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 443 LGGSVAATGVPTLRSG*RTHY*KIPSFPWL*PTS-SRDQQDQTGCHLLKALKAWSDILKV 619
L ++AA+GVP L + FP + + Q+ + L+ LK W+DI KV
Sbjct: 127 LVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKV 186
Query: 620 YKS 628
YKS
Sbjct: 187 YKS 189
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 919 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1043 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1096 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 243 GGWSQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG 371
GG S T ES GT + V ++ R GG SG G + GG
Sbjct: 1043 GGGSATHVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 284 TCCRP-NSACPWWWYS*VRSGC 346
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 284 TCCRP-NSACPWWWYS*VRSGC 346
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 284 TCCRP-NSACPWWWYS*VRSGC 346
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 186
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AY119139-1|AAM50999.1| 615|Drosophila melanogaster RE41430p
protein.
Length = 615
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +2
Query: 377 VRPHEALAALAPSRQPPTAESGLGGSVAATGVPTLRSG 490
VRP ++ + P PP A SG GG GVPT SG
Sbjct: 175 VRPVR-ISHMTPHHLPPNATSG-GGGAPGGGVPTAGSG 210
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 73 SIGSPTFSVGVFREE*DGAGCSQAPPVRVQG--AHPSGPG 186
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
isoform C protein.
Length = 1205
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -1
Query: 369 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFVTSLLL 238
HH H D + +HHH Q+P HW LL
Sbjct: 941 HHHGSQHHHHDARHSHHHHHQPLLPHHQQQHP--HHWHHRKALL 982
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,561,538
Number of Sequences: 53049
Number of extensions: 591994
Number of successful extensions: 3472
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3324
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -