Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060772.seq
         (474 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical p...    30   0.98 
Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical pr...    27   9.1  
Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical
           protein F36G9.12 protein.
          Length = 707

 Score = 29.9 bits (64), Expect = 0.98
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 112 FVLWGNFEII*NLIILKVNFIYCILCIR 195
           F LW N E+I ++   KV FI C+ CIR
Sbjct: 250 FSLWTNAELILSVKEQKVGFIKCLDCIR 277


>Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 112 FVLWGNFEII*NLIILKVNFIYCILCIR 195
           F LW N E++ ++   K  FI C+ CIR
Sbjct: 240 FSLWTNAELLLSVKEQKPGFIKCLDCIR 267


>Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical
           protein F28G4.5 protein.
          Length = 720

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 112 FVLWGNFEII*NLIILKVNFIYCILCIR 195
           F LW N E++ ++   K  FI C+ CIR
Sbjct: 232 FSLWTNAELLLSVKEQKPGFIKCLDCIR 259


>Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 112 FVLWGNFEII*NLIILKVNFIYCILCIR 195
           F LW N E++ ++   K  FI C+ CIR
Sbjct: 240 FSLWTNAELLLSVKEQKPGFIKCLDCIR 267


>Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical
           protein C31A11.5 protein.
          Length = 705

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 112 FVLWGNFEII*NLIILKVNFIYCILCIR 195
           F LW N E++ ++   K  FI C+ CIR
Sbjct: 240 FSLWTNAELLLSVKEQKPGFIKCLDCIR 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,095,988
Number of Sequences: 27780
Number of extensions: 60015
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)