Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060770.seq
         (640 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    59   1e-08
BC047726-1|AAH47726.1|  273|Homo sapiens OAF homolog (Drosophila...    31   2.6  
AY459296-1|AAR23238.1|  273|Homo sapiens NS5ATP13TP2 protein.          31   2.6  
AK131083-1|BAC85133.1|  500|Homo sapiens FLJ00283 protein protein.     31   4.6  
AK024461-1|BAB15751.1|  443|Homo sapiens FLJ00053 protein protein.     31   4.6  

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 59.3 bits (137), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +2

Query: 110 MVNYAWSGRSQGKP*WRTVAILTCKSIVGTGYRG 211
           MVNYAW+GRSQ K  WR+VA+LTCKS+V  GYRG
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRG 34


>BC047726-1|AAH47726.1|  273|Homo sapiens OAF homolog (Drosophila)
           protein.
          Length = 273

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -1

Query: 535 CH--ERPTPFMCPMSVF*AP*NYVWFIPQRQFCL 440
           CH  +RPTP+ C +       ++ +++PQRQ CL
Sbjct: 232 CHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265


>AY459296-1|AAR23238.1|  273|Homo sapiens NS5ATP13TP2 protein.
          Length = 273

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
 Frame = -1

Query: 535 CH--ERPTPFMCPMSVF*AP*NYVWFIPQRQFCL 440
           CH  +RPTP+ C +       ++ +++PQRQ CL
Sbjct: 232 CHSRDRPTPYKCGIRSCQKSYSFDFYVPQRQLCL 265


>AK131083-1|BAC85133.1|  500|Homo sapiens FLJ00283 protein protein.
          Length = 500

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = -3

Query: 413 IRSPASSFE*AGVLTHLKFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGTSDGTS 237
           IRS A+     G  THL F +  ++ R Q       P   VLK  + A  P G  DGT+
Sbjct: 260 IRSTANLSRSQGRGTHLAFVSSPQALRTQAFQVLLQPLACVLKATVQAPGPPGLLDGTA 318


>AK024461-1|BAB15751.1|  443|Homo sapiens FLJ00053 protein protein.
          Length = 443

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = -3

Query: 413 IRSPASSFE*AGVLTHLKFENRLRSFRPQCL*SFALPDETVLKFYIDASYPEGTSDGTS 237
           IRS A+     G  THL F +  ++ R Q       P   VLK  + A  P G  DGT+
Sbjct: 260 IRSTANLSRSQGRGTHLAFVSSPQALRTQAFQVLLQPLACVLKATVQAPGPPGLLDGTA 318


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,023,325
Number of Sequences: 237096
Number of extensions: 2256728
Number of successful extensions: 14550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14550
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)