Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060769.seq
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory recept... 23 2.2
AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory recept... 23 2.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.0
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.0
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.0
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.7
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 21 6.7
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 21 8.8
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 8.8
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 21 8.8
>AM292374-1|CAL23186.2| 659|Tribolium castaneum gustatory receptor
candidate 53 protein.
Length = 659
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 469 LLLSLDVLYEIMAMKCQIPHETLFRKHLL 383
++L L+V+Y + A C I +F + LL
Sbjct: 355 IILGLNVVYVVTAWICAITKRDMFVEFLL 383
>AM292345-1|CAL23157.2| 384|Tribolium castaneum gustatory receptor
candidate 24 protein.
Length = 384
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 469 LLLSLDVLYEIMAMKCQIPHETLFRKHLL 383
++L L+V+Y + A C I +F + LL
Sbjct: 80 IILGLNVVYVVTAWICAITKRDMFVEFLL 108
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 516 NA*LSRKWVDSSSRWNSS 463
NA L+ +W D + +WN S
Sbjct: 53 NAWLNLEWNDYNLKWNES 70
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 516 NA*LSRKWVDSSSRWNSS 463
NA L+ +W D + +WN S
Sbjct: 53 NAWLNLEWNDYNLKWNES 70
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 516 NA*LSRKWVDSSSRWNSS 463
NA L+ +W D + +WN S
Sbjct: 53 NAWLNLEWNDYNLKWNES 70
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 522 LPNA*LSRKWVDSSSRWNSS 463
+ N LS +W D + +WN S
Sbjct: 51 ITNIWLSLEWNDYNLKWNES 70
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 522 LPNA*LSRKWVDSSSRWNSS 463
+ N LS +W D + +WN S
Sbjct: 51 ITNIWLSLEWNDYNLKWNES 70
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 21.4 bits (43), Expect = 6.7
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 236 HVSDVAYVYRDYLIGEMVEIISYLIYMLALGQTMLKILWDLTQ 364
H+SDV YV YL+ +V + +++LA KI+ DL Q
Sbjct: 280 HLSDVRYVMVVYLLKNVV-LYGLELFILA------KIVTDLCQ 315
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 21.0 bits (42), Expect = 8.8
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 140 IRESRYVTRDPNE 178
I +Y T+DPNE
Sbjct: 900 ISSGQYTTKDPNE 912
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 77 KIFVYPSDGTVSASYRKVL 133
KIF P D + SY K+L
Sbjct: 6 KIFPVPGDKNLHKSYSKML 24
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 21.0 bits (42), Expect = 8.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 77 KIFVYPSDGTVSASYRKVL 133
KIF P D + SY K+L
Sbjct: 6 KIFPVPGDKNLHKSYSKML 24
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,088
Number of Sequences: 336
Number of extensions: 3817
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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