Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060769.seq
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.8  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   6.3  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   6.3  
DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.       23   6.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   6.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   6.3  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   6.3  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   8.4  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
            protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 158  VTRDPNEACLFVPAIDTLDADPLSSEHVSD 247
            + R P+ +C F  AIDTL+        V+D
Sbjct: 977  MNRVPSPSCSFCSAIDTLEHKFAGCRRVAD 1006


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 226 VIRTCI*CRLRLSRLPYWRNGRNHLIFNLYAGTWP-DY 336
           VIRT    +L   +  ++ NG+ ++++  Y  T+P DY
Sbjct: 175 VIRTINYKKLYDPKFGFYGNGKYNIVYANYTATYPMDY 212


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +1

Query: 427 SLPLFHKEHPEKGGVPPAA 483
           SL L H E P  G +PPAA
Sbjct: 30  SLVLDHTELPLAGTIPPAA 48


>DQ182014-1|ABA56306.1|   55|Anopheles gambiae G(alpha)m protein.
          Length = 55

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 507 TKHLVAFKGKRYVHGYWVVKXRNSLWHLHDGNNLILVTHL 626
           T HLV  K   Y H       +N    L+D +N+IL  +L
Sbjct: 14  TSHLVGRKRTCYFHFTIATDTQNVRTVLNDVHNIILTKNL 53


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 226 VIRTCI*CRLRLSRLPYWRNGRNHLIFNLYAGTWP-DY 336
           VIRT    +L   +  ++ NG+ ++++  Y  T+P DY
Sbjct: 175 VIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYPMDY 212


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 226 VIRTCI*CRLRLSRLPYWRNGRNHLIFNLYAGTWP-DY 336
           VIRT    +L   +  ++ NG+ ++++  Y  T+P DY
Sbjct: 175 VIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYPMDY 212


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 226 VIRTCI*CRLRLSRLPYWRNGRNHLIFNLYAGTWP-DY 336
           VIRT    +L   +  ++ NG+ ++++  Y  T+P DY
Sbjct: 175 VIRTINYKKLYDPKFGFYGNGKYNIVYANYTATYPMDY 212


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 522 LPNA*LSRKWVDSSSRWNSS 463
           + N  L  +W D + RWNSS
Sbjct: 54  ITNIWLKLEWNDMNVRWNSS 73


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 516 NA*LSRKWVDSSSRWNSS 463
           NA L+ +W D + RWN S
Sbjct: 73  NAWLNLEWNDYNLRWNDS 90


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 109 DSPITWVHKNFWITSTFRKVETCIHTTRLCCR 14
           D+P   ++ NFWI S   K+  CI  T L  R
Sbjct: 240 DNPAL-LNVNFWIYSVVFKLIPCIALTILSLR 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,547
Number of Sequences: 2352
Number of extensions: 15646
Number of successful extensions: 33
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)