Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060768.seq
         (535 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.9  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   3.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.0  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 67  WTRSRCSIGRTWTGIFFVTLTNKYD 141
           WTR+   I +   G F+ +LTN ++
Sbjct: 286 WTRNADDISQEEYGEFYKSLTNDWE 310


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +1

Query: 247 WMXXGEQTTTNDNDAGHSARPKXXVRCQTTTKSXPXLK 360
           W+  G+ ++   ND     +     R Q   K+ P LK
Sbjct: 125 WLKKGKLSSFESNDETKDGKVGLYERIQKLKKANPSLK 162


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 409 KWQSATXVVQVTX*RGNXRSPKRQEFLPNVNXHF 510
           +W S     Q    + N R+ K + F  NVN  F
Sbjct: 45  QWSSLNKNFQFIDKKLNNRNSKSRVFYENVNFQF 78


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 7/30 (23%), Positives = 16/30 (53%)
 Frame = +1

Query: 328 QTTTKSXPXLKRSKQLVRQHSLNGIHXKWQ 417
           +TTT+    +  +  LV+ +  +G+   W+
Sbjct: 127 ETTTRRLAFVNSAYTLVKAYGFDGLDLAWE 156


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +1

Query: 376 VRQHSLNGIHXKW 414
           +R+H+  G+H  W
Sbjct: 744 LRRHNFKGLHLDW 756


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,935
Number of Sequences: 336
Number of extensions: 1990
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)